Array 1 182542-179892 **** Predicted by CRISPRDetect 2.4 *** >NZ_UKFQ01000003.1 Klebsiella pneumoniae strain EuSCAPE_FR072, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 182541 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 182480 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 182419 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 182358 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 182296 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 182235 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 182174 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 182113 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 182052 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 181991 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 181930 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 181869 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 181808 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 181747 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 181686 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 181625 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 181564 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 181503 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 181442 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 181381 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 181320 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 181259 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 181198 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 181137 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 181076 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 181015 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 180954 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 180893 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 180832 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 180771 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 180710 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 180649 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 180588 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 180527 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 180466 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 180405 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 180344 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 180283 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 180222 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 180161 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 180100 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 180039 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 179978 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 179920 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //