Array 1 237756-233828 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP070092.1 Klebsiella pneumoniae strain FDAARGOS_1316 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 237755 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 237696 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 237635 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 237574 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 237513 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 237452 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 237391 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 237330 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 237269 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 237208 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 237147 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 237086 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 237025 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 236964 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 236903 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 236842 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 236781 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 236720 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 236659 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 236598 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 236537 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 236476 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 236415 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 236354 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 236293 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 236232 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 236171 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 236110 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 236049 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 235988 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 235927 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 235866 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 235805 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 235744 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 235683 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 235622 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 235561 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 235500 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 235439 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 235378 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 235317 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 235256 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 235195 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 235134 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 235073 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 235012 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 234951 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 234890 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 234829 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 234768 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 234707 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 234646 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 234585 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 234524 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 234463 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 234402 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 234341 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 234280 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 234219 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 234158 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 234097 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 234036 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 233975 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 233914 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 233856 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //