Array 1 172195-173140 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PHGT01000006.1 Achromobacter xylosoxidans strain GAD3 Scaffold5_1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    172195	    29	 100.0	    32	.............................	ACGGTTTCGGCTTCCAAACGCATCCTGCCCGA	
    172256	    29	 100.0	    32	.............................	CAATTTAAGGCGTCCCGGGCCTGACCCGCTGC	
    172317	    29	 100.0	    32	.............................	GTCAGCAAGACTGGGTCAAGCAGGTCAGGGAT	
    172378	    29	 100.0	    32	.............................	AACATCGATGCGCAAATCAAGAGGCTGCAGCA	
    172439	    29	 100.0	    32	.............................	CTCAGGGGGGTCTTGATAGGGGCCAGCTATGC	
    172500	    29	 100.0	    32	.............................	GGCGCCAGGAAATCCCGTGTCGCATCCGCCGG	
    172561	    29	 100.0	    32	.............................	GAATTGGCGGCGCGCCTTCGGTATGCCCGTCC	
    172622	    29	 100.0	    32	.............................	AAGGTCACCGAGTACGCGCAGACCTATCCCGG	
    172683	    29	 100.0	    32	.............................	GAGCCATCCATGGCAATCAAAGAGTACGTCGG	
    172744	    29	 100.0	    32	.............................	GAGGTGAAAGACGGCCTGAGTGCGATGGTGAG	
    172805	    29	  96.6	    32	T............................	GACGTTTACGGCGCCGATGGGCAAAGCAACCT	
    172866	    29	 100.0	    32	.............................	ACGCAATGCGTCCTCGGCCTGGCGGATGATGC	
    172927	    29	  96.6	    32	...........................T.	CGCTGACTCGCAGCGCTGACCGAAACCCGCGT	
    172988	    29	  93.1	    32	.........A..C................	GGCGCCGAGCTGCTGCTGAAGAAATTCGGCGC	
    173049	    29	  89.7	    32	........T...C....A...........	CTGCGCGCCCCTGTAGCCGATGAGCGGGCGGC	AG [173064]
    173112	    29	  93.1	     0	........T........A...........	|                               	
==========	======	======	======	=============================	================================	==================
        16	    29	  98.1	    32	GTGTTCCCCGCGTGAGCGGGGATGAACCG	                                	       

# Left flank :   TGGGGCGGATCATCCCGACAATCGAGGAGGTGCTTGCCGCGGGCGACATTCTGCCGCCCGAGGCGCCACGAGAGTCGATACCGCCCGCGATACCGAACCCGGAAGGCATTGGCGATGCAGGCCATCGAACGCGGCAATGAGCTTTCTGGTTGTCGTCACTGAAAACGTTCCGGCACGCCTGCGCGGACGCATGGCAATCTGGTTATTGGAAGTACGCGCAGGCGTATATATCGGGGATGTTTCCAAGCGCACCCGCGAGATGATCTGGGAGCAGCTTTCCGAGGGGTATGAAGACGGTAATGTCGTGATGGCATGGGCCAGCAATTGCGAGTCAGGCTATGCGTTTCAAACCTTGGGTGAAAATCGCCGTGTTCCCATTGAATTTGACGGGTTGATGTTTGTCGCCTTTCATCCTGTTGACAATCCTGATTGTTAGTAATCCGATCTGGTGGAATTTTTGGTGTTTTTTTCGGCTTTTAAATCAACTGCTTAAGCGAAGT
# Right flank :  GGCCCCTAGGGCTTCGAATCCACAGCTGCCTTCTTTGGGGCAGTTGACGAAGCGCAAGGCCGTGTAGCGGCCTGACGAATCTCGGCCGATCCCATACGGATGCAGCGACCCCGTTGATTTATCTTGGCTTGCCACCCAGCCGGTCCATCGCGAACAGGCCCGTCAACCCGCCAACGCGCCTTCCCCATTCATTCCTTGACGGACACTGAGGTCTTCGGCCCCCCGTGGCAAGCGGCCGGGCAGGCCATCGCTGTCGTTGCCGCCCGTTCCCCGAATACGTCCCAGGGCGGCGTATACGACTGGTAACCACCGCTGGAGCCTTGTTTCAGTGCGCCGAAATACACTGGGCGCACTTTGGACTCCGCGTTTTTGACATGAAAATTCTCTGTAGCCTGGCCCTGCTCGCCTCCTTGCTCGGCGGGTGCGCCGTATATACCCCGGACGGCGCCGTGATCGTCGATCCTCACCGTGGCGGTGGCGGCGGCGGCTTCTGTCCGCCG

# Questionable array : NO	 Score: 6.16
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGTGAGCGGGGATGAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGTGAGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-11] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [61.7-38.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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