Array 1 149159-153512 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT727794.1 Halomonas utahensis strain P-halo, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 149159 32 100.0 33 ................................ TTCCCAGGCGTGGAAATCACTATTTCCAACGGG 149224 32 100.0 35 ................................ ATCATGAACGGGGGTGATCTTCTGACGCTGCAGCG 149291 32 100.0 34 ................................ GTGTGCCATTAGGTGTCCTCCGGTGGTTCGGGGC 149357 32 100.0 34 ................................ ATCAGACCCCCTCAAAAACGACCGCACAGAGCGC 149423 32 100.0 34 ................................ TGCTTGATGGCGTTGATTTTGGTCTGATCATTCT 149489 32 100.0 35 ................................ AGTCATAGCTGAATACGTCTCAATAGGAACAGTGA 149556 32 100.0 35 ................................ ACATCGACGAGATCACCCGCTTCGGTATCAGGCCC 149623 32 100.0 34 ................................ TATTCAGGCAGTAAACGCCGCCGCTGAAACCCGC 149689 32 100.0 34 ................................ TCAAGCTAGCTCAGCGGGCGGTGGCGCCAATAAC 149755 32 100.0 34 ................................ GTCTACAACATCACGATCGCCACCAAACAGCGCG 149821 32 100.0 34 ................................ ATCAAAAAGGTCCAGTACATGCCGATGGTGGACG 149887 32 100.0 34 ................................ TGTTATCGATCAAGCTCTTGAAGGACGAATCGAA 149953 32 100.0 34 ................................ TCTGGCAGGCTGGGCAGCTCCACGATGCGGACAG 150019 32 100.0 35 ................................ TGCTCCGGGGCCGCGGCTTCCAGGTCGTCCATGAT 150086 32 100.0 35 ................................ TGCTTGAGATAGCCGTCCTTGTGCTCGGTAATCGT 150153 32 100.0 37 ................................ GTCGGCTGATGCTCGGTTGCCGCCGATTGCTGACATT 150222 32 100.0 35 ................................ ACCGTTACCTATGAAGCCGGCGCTAACGGCTCTAT 150289 32 100.0 35 ................................ AGCCTGTCCAGAAGCGATTGCGGCGCGGCCTCAAC 150356 32 100.0 34 ................................ ACCGGGCCGCCATCAGCCCCCGTTACCTCTTGGC 150422 32 100.0 35 ................................ CCGACACACTTTGAATGGCTGCCTGATACTGTTAA 150489 32 100.0 36 ................................ TTTGCCAGTGACAGTACGCTCGACATAAGTTGTCTC 150557 32 100.0 34 ................................ GATTTTGTGCGCAAACGCGGCGCGGTCCGTAAAT 150623 32 100.0 35 ................................ AGGGCTCATCGCTCGCCCTTGCCCTGAGCAGATCC 150690 32 100.0 34 ................................ AGAGACTATCGGAAACATCCGTGATTCGCTCGTT 150756 32 100.0 35 ................................ CCATTTAACAGTCAGAGGAACGCCGTCATGTTGCT 150823 32 100.0 34 ................................ TAACACTGCATTCTTTAATGCGTTAGCCGCAAAG 150889 32 100.0 34 ................................ AAGGGACTGGTAGAGACCGATGCAGCCGCATCTT 150955 32 100.0 34 ................................ GCATGTCCAGCGGTTGCTGCATTGCACGTAAGTC 151021 32 100.0 36 ................................ TGTGCCGTAATACTTGATGAGGCGCACCGCATAACG 151089 32 100.0 34 ................................ AAGGCGCGGCGCTACAAGTACCTTGTCAGCGTGG 151155 32 100.0 36 ................................ ACGTGCGGGTGATACCAGATTGAGAACGTCCGCCAT 151223 32 100.0 34 ................................ CAGCACCTACCGCGATCTCGAGTGCAAAAGCTGT 151289 32 100.0 34 ................................ ATCAGCGACGAGAACCCGCACCGGTCGATGGCCG 151355 32 100.0 35 ................................ ACGCAGCTGGTCTACAGGATTGAAGCACAGCACCT 151422 32 100.0 34 ................................ TCGTTCGCGCTACGTCACCCTGGTGTCATTCGAT 151488 32 100.0 34 ................................ GTCTGCCAGTGGGTGCGGGATCATGTCCGCATCG 151554 32 100.0 35 ................................ ACTGGCCATGGACCCAATCCGCAATATCTGAACCC 151621 32 100.0 34 ................................ AGACGGTTCCCGGCGGCCAATGCGCATGGTTGTG 151687 32 100.0 34 ................................ ATCAGCGACGAGAATCCACACCGGTCAATGGCCG 151753 32 100.0 34 ................................ GAATTTAAGACCACGCCCAAGGGTGTGGCGGATT 151819 32 100.0 34 ................................ CGGCATCGCCAAAGATCGACACCAGATAGTCAAA 151885 32 100.0 34 ................................ AAGATCGGTCACGCCCTGGTCGATGAGCTCGACA 151951 32 100.0 35 ................................ ATATCCACATGCGTTACCTTGGAACTCAGCGGCTC 152018 32 100.0 33 ................................ GCGGTGGTCGAATCCCGGCGCTGGGCTGGCGAG 152083 32 100.0 35 ................................ CGCCGCGTCCTGCTCGGCCTGTTCCTCGGCCTGGG 152150 32 100.0 34 ................................ CTCCATGACGCCAACCTGAGACGCAAGGCGGGCC 152216 32 100.0 34 ................................ CTCAAAACGACACCTCCACTGGCGAAGACTTCAA 152282 32 100.0 36 ................................ TGGCACAGATGCAAGCCGCCCAGCGCCAGGGCGGGG 152350 32 100.0 35 ................................ TTTGGTTGTCATCATGCACACCACCTCGGGAAACT 152417 32 100.0 35 ................................ AAATGGAATCTGTTTTTTCATTTTTCACTATCTCT 152484 32 100.0 33 ................................ CGTGCGGGGGACGAAACCACCGGCCGATCCCAG 152549 32 100.0 34 ................................ CTTGGCGAACTCATCCGAGCGCAGAGACAGTTCC 152615 32 100.0 34 ................................ CTCGGATGCCTTTAACTCTGAGGACATGTAAACG 152681 32 100.0 34 ................................ CCGTTGCGCCTTGCCTGTAGGCTGTTTCGAAGGA 152747 32 100.0 34 ................................ GCCCCTACTGGTCACACGTTAATCACAGCGCCAT 152813 32 100.0 34 ................................ CGGCCATATCTGGTGTGTATATAATGATCTCACA 152879 32 100.0 33 ................................ ATACTCACGCCCCAGCTCCCGATCAAGCAGAAT 152944 32 100.0 33 ................................ GCATCCGTGAAAGCCGGATCACCGTGGCCGGCC 153009 32 100.0 34 ................................ TCTGGCCAGTCATCTTGAGTATTACCAGGACGGC 153075 32 100.0 38 ................................ TGCCGCTTCCCGAGCGCCACGAACCACCGGAGGACACC 153145 32 100.0 34 ................................ AAGGTAGGCATCGCGGGTTTCAGGCAGTTCAAGC 153211 32 100.0 35 ................................ GGCGTCAAGGGCTGGAAACAGTTTGTAGCCCGCTA GG [153235] 153280 32 96.9 35 .............T.................. GAGCGAGCACAAGGCGCGGGAGTGCAGGTATTCGC 153347 32 90.6 35 ...A......GT.................... GAGAACTTCACTCGCACCGCCCAGGTCCTGATGGA G [153369] 153415 31 87.5 35 ......-....T............G...G... AATAGTGCAACCTCCGGCCAAATTTGGCCGATTTC 153481 32 71.9 0 ..........GT.........C....CACTTT | ========== ====== ====== ====== ================================ ====================================== ================== 66 32 99.2 34 GTCGCGCCCCACGCGGGCGCGTGGATAGAAAC # Left flank : TTCTACACACCCTACATGGTGAAATAGCGATGCTGGTACTGATTACCTACGATGTCAGTGTAACGACTGCAAAAGGTCGGCGCCGACTCAGGCAGATCGCAAAAGCCTGTCTGGACTATGGAATACGGGTTCAGAATTCCGTCTTCGAATGCGATGTGGAACCAGCACACTTTACCCAGCTCAAGGATGAACTGCTCTCGATCTATGACAGCGAGGAAGACAGCCTTCGGTTCTACTTTCTGGGCAAGAAAGGAAGAGAGAAGGTCGAGCACCATGGCTCCAAGCCAGCTAATGACCCATTGAATGACGCGCTGATCCTATAGGTCCGCTACCCTATGGTTCCCATAAAAAACCCGACAGATCAGCGGAACCCCAACCATCTGATTCACAAGTCTTTCCGAAACGGACGGCACTTCTTCGCCTTTATCGCTCCTCTTTGTTACCGGATCAGCGGGAACCGCTGGTTTTTGGGTTGCTCTTTAACAAGCTAGACTTGAACG # Right flank : TCGCTCAGACCATCTCCACAAAGCGGGGTAATTTCATGGCCTCTCAGGTCATGCTGGACTTCAAGATATGGAACGTCCCAGCCCTACCTTGCAGCCAATTTAGCCCTAAGGCAAAATACCAAACACTGTTAAAAAACCAGATCAATCACACAGGGATGTCGATTTATGGAAATCAGGATCACAGCCACCAGTGCAAGCGTCTCTTTCGGTAAAACAGGTTTCGGGGTTAACGGATTCACCGGAACGTATATCGAAACCCGCCCCAGCAAAGATGCTCCCCAGAAGCTTTACGGCATAGTAAAAGGCCCCTCGTTTGGTTCCTCCACGGGATCGTTCGTCGCAAGTCACGTACAGACAGACTGGTTCTCTATCAGAACCAACGCCGAACTTTTCCGTACTCCTGGAAAGCTGGCTGGAAAAACGCTGGATATAAAACTGACCGGAGCATTGGTCGGGGGCGGGAAGGTAGACGTCACTATCAACCTTATTGATGACACCGG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGCGGGCGCGTGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCACGCGGGCGCGTGGATAGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.80,-10.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //