Array 1 128855-126267 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUCU01000015.1 Klebsiella pneumoniae strain 172A9 contig_00015, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 128854 29 100.0 32 ............................. CTGCTGACGACGTGGATCCGCTGGAACGTCAC 128793 29 100.0 32 ............................. TACTGGCAACGGAATTCGGTTCGACGTTTATG 128732 29 100.0 32 ............................. CGCTCCCCAGGACAAACGCGGTCTCCGGATCC 128671 29 100.0 32 ............................. TTGCACGCACGTGAATAGTCCAGGCCGCCTGG 128610 29 100.0 32 ............................. TCCAGCGTGTGCATCTCGCCGATCTCTTTTTG 128549 29 100.0 32 ............................. TAGGGTATCCCGTTCTCATCCACGGCAATATG 128488 29 96.6 32 ............................T TGAACTGATCAAGGGGCGGCTTCAGGCAATTG 128427 29 100.0 32 ............................. AGTAACGAAACGGTCGCACTCAACCGCGCCGC 128366 29 100.0 32 ............................. TCTTGTTAGTGATTGAGTAGCCCATCTGGGAC 128305 29 100.0 32 ............................. CTACCCGTAAAAAAACCGCTGCCGCTGTCGCC 128244 29 100.0 32 ............................. CTCTTAATGGAATTCGTGAAGACGCTGGCCTT 128183 29 100.0 32 ............................. ATCTGGCGAGATTTTACGGGAAATAATATCCC 128122 29 100.0 32 ............................. GTTTTGACCGAGTATATCTGGCGGGATACCCC 128061 29 100.0 32 ............................. GTCCTGGCTGACCCGGACGAATTTGTTGTGAT 128000 29 100.0 32 ............................. GCGGTTTGCTATCAGATGAGCCTGTCATCAAA 127939 29 96.6 32 ............................T GCTGCACGATGTGATTGAGAGATGCCGGGAAG 127878 29 100.0 32 ............................. GGTTTATAGAGGCTGAGGTATTCACAATGCGC 127817 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 127756 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 127695 29 100.0 32 ............................. GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 127634 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 127573 29 100.0 32 ............................. AGCTGCGTGACGTTGAAAAAGATGGCTGCGGG 127512 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 127451 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 127390 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 127329 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 127268 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 127207 29 100.0 32 ............................. TCTTCGAGTTCAGGCCGGTATCCCACTCGCTC 127146 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 127085 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 127024 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 126963 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 126902 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 126841 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 126780 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 126719 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 126658 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 126597 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 126536 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 126475 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 126414 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 126353 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 126295 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 43 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCTTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCAACACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //