Array 1 1479092-1484915 **** Predicted by CRISPRDetect 2.4 *** >NC_014206.1 Geobacillus sp. C56-T3, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 1479092 29 100.0 37 ............................. ACGTGGTGGCCAGCGACACGACGAGAATTTGTTTCAC 1479158 29 100.0 36 ............................. TGCATCAATTCAGTGGTACGAACGCGGAATTTATGC 1479223 29 100.0 36 ............................. TTAGAAACACTACACCAATTCAAACTCGTGAGTGAG 1479288 29 100.0 38 ............................. TGGGACGAATCGGACGGCGTTTTCACGATACAACACAA 1479355 29 100.0 37 ............................. TGATTGTCATCCAAAACTATAAAGTGCACAGTAGCCC 1479421 29 100.0 38 ............................. AACACATAAAATCGTGGAGTATGCGAGCGATTATTTAG 1479488 29 100.0 36 ............................. TTTTAAAACGTCCGTTACATTTGACGGCATCACTGG 1479553 29 100.0 40 ............................. TTTCATTGACTGGTGTATGGCTTCACGAAGCGGACAATCC 1479622 29 100.0 35 ............................. AAAACGGATAAATGTGGTATGATAGGCGTGTAATA 1479686 29 100.0 35 ............................. TAAACTTCTTGCTGAAAATAAAATTGAGGAAGCGA 1479750 29 100.0 35 ............................. ATTGAATCGCGGGGTGGAGCAACGGCAAGACAAAC 1479814 29 100.0 36 ............................. GCTACTGCAAGAGATTGCCTTTTTATACCCGACCGG 1479879 29 100.0 36 ............................. TGTTCAGCTTAGAAATGTCTGCGAAATCACTTCTCA 1479944 29 100.0 35 ............................. TTCTCCATTGAAAGAGACATGAGATACTCAACCGT 1480008 29 100.0 35 ............................. CGATCCCCTTGACGCCCCCCTCGCGATCCGGGAGC 1480072 29 100.0 35 ............................. AACGAGGACAGCCGCGACATATGCAGACGTAATCG 1480136 29 100.0 36 ............................. ATAAAGCGATCCCACCAATCGCAGACAGGCCAACGC 1480201 29 100.0 39 ............................. ACTTTACGTTCTGCTGTCTCAGAATCAACAAAATCGTAA 1480269 29 100.0 33 ............................. AAAGCCGTTTTGTTCAACGAATTGAATAATCTC 1480331 29 100.0 37 ............................. ACGACGTAGCAGGAAAAGAATTAGGTAAGGCAATCAC 1480397 29 100.0 35 ............................. TTTGGTTGTGGTCGGTGTTGGCATCGGTTTTGCTT 1480461 29 100.0 35 ............................. CGTCAATGTCTGACCTGTCGTTGACGTAGCAGGAG 1480525 29 100.0 36 ............................. TATAATTCTTTTGATTATGGCGGCTCGATGTTTTAT 1480590 29 100.0 36 ............................. CGGATCAAACACCGCCTTGGCAACAACAAAACCGAC 1480655 29 100.0 37 ............................. TACGACCGCGCCCCGCTCCGCGCGGGCGGGGCCCCGC 1480721 29 100.0 35 ............................. AGTCGAGTGTGTATGTTTGGTTTCGCACAGCATTA 1480785 29 100.0 35 ............................. AGAAGAGGATAGCGGGAGTTTGTGTTTGAATTATA 1480849 29 100.0 39 ............................. CCGAATGTGCAACAACTGCATCATTCACCTGCTTCACCG 1480917 29 100.0 35 ............................. AGAATTGGCACCTCATCATCTTGCAACGCAACATT 1480981 29 100.0 39 ............................. TGCGCACAAGATGCTGACAGAGAAGGAGCAGGAATGCGA 1481049 29 100.0 35 ............................. AACAACACATGAACGGGATTTGTCGCTTCTACAGC 1481113 29 100.0 36 ............................. AAAACTCTTCGGTCAGCTTCAACTTCTGATGTATTT 1481178 29 100.0 35 ............................. AACACTTCCGCAACCGTTAGGCTGTCTGTGACAAC 1481242 29 100.0 37 ............................. GAAGCATATTCACATCATCAGCCTCAACCGTATCGCC 1481308 29 100.0 35 ............................. GAAGGGGACGGAGAAGAATTTACGATTGCATCATT 1481372 29 100.0 37 ............................. TGTGAATGTAGAGAGCGAAAAGCCTGGAAGCGTCGGT 1481438 29 100.0 35 ............................. TGAAGAGATTGTGTCGTTTATTCGCGTGTATGAAG 1481502 29 100.0 36 ............................. CAAGAAGCTGATTTCCGTTCGGTGTACCGATATACA 1481567 29 100.0 35 ............................. CAAGCGGCAAGATCATGGGTATTAAAGGGGGATAC 1481631 29 100.0 37 ............................. TTTGATTTTCTCCAGTTCCTTCATCAGAGCAGAGATG 1481697 29 100.0 37 ............................. AAAAAACATAGAAAAGAATAAGTTTTTCAGGGGGAGC 1481763 29 100.0 37 ............................. AATCTTTTGTCATTCGTCATTTCCCCTTTCAGTATTT 1481829 29 100.0 34 ............................. GCAAAATTGCGCCAATTCCCGCCAGCAGGGATCC 1481892 29 100.0 36 ............................. CATCACTACTACACCGCCAACTACGCCGGCAGTCGG 1481957 29 100.0 35 ............................. TCGGACGATACACACTCATTTTGCTGACGTCACCG 1482021 29 100.0 35 ............................. GTCAACAATCGTAGTTTATATTGTTGTCCGTCAAT 1482085 29 100.0 38 ............................. GTAGCACGTCCAACCGGTTTGCGGCGTGTATAAATCCC 1482152 29 100.0 35 ............................. TCCTCACTTTCTTCGAATCGCCCCTCGCACTCTTT 1482216 29 100.0 37 ............................. TGATTCGTTCTCTCCGCCACTCAACCGGCTTTTCTGT 1482282 29 100.0 35 ............................. AGCAGAGCAATAATAATCAGCAACACCCATGTAAC 1482346 29 100.0 35 ............................. GCGATAAACACACGAACGAAAAACATGGCGTGTTC 1482410 29 100.0 36 ............................. AAGCACGTAAAGCTATTACTAATGCGTCTGCCGATT 1482475 29 100.0 37 ............................. TAGCTTGGGTGAGCTGATACATGCCGGCTTGACGTTC 1482541 29 100.0 36 ............................. CAAGAGTTATAACCTTACAATATGTCCCACTCCCTG 1482606 29 100.0 37 ............................. TTGACATAGATGTATCGAATTGGCTGCTTGCGACCCA 1482672 29 100.0 37 ............................. CGGTTCCACGCTTCTGCCAGTTCTGCCTGGCGGACAG 1482738 29 100.0 34 ............................. TTAAAGATAAATCTGGCGGCATCGCTCGGCGCGT 1482801 29 100.0 37 ............................. TGAATATCTCGGTGAGCCGATTGGGAGTGGTGTGGTG 1482867 29 100.0 36 ............................. GTTCTTGCTTCACTCGTTGCTTATGAACACCAGTAG 1482932 29 100.0 36 ............................. GAAGTTGAACAGTGAAGTGATTTCATAATGAGCAAG 1482997 29 100.0 35 ............................. AACTGGAGAAGATCGGGATCATCGTCTCGGCGAAT 1483061 29 100.0 35 ............................. GGAAAATGGGCGGTACCGAGTGCAGCCGAACATAT 1483125 29 100.0 34 ............................. TCAGAAATTGGATAAAGTCTGGGAAGATTTCTTC 1483188 29 100.0 35 ............................. GGAATGCGGATATTGAGAGGTGGCGACTACAGCGG 1483252 29 100.0 36 ............................. GAGGAGCGAAAGCAATGGTTTGAACAAGAATGGCAA 1483317 29 100.0 39 ............................. TCTAAGTCTTTTGAAATTTACTCATTCGAATATAACGGG 1483385 29 100.0 37 ............................. ACAGCGTACTTGCGGAATTACTTGGTTGGGAAATCGA 1483451 29 100.0 36 ............................. GTGTTTAGCGCCTGCTGTGTTCTTTACGTCCGTATA 1483516 29 100.0 38 ............................. TATATATCAGCACTTGGTCCGTTCCTGCTTTTTTCTTG 1483583 29 100.0 36 ............................. ACTATAACATCCGACTGAGGAACAGCAACACCGGCC 1483648 29 100.0 37 ............................. TAAAAACAAGCGCATACCGAACATGTTTCACATTATA 1483714 29 100.0 36 ............................. TCGTCTCCGATGGCCGCTAATCCACTGGGACATCTG 1483779 29 100.0 37 ............................. AAAAGCGAATAATGCTTCATTCTTCAAATGGTTGTCT 1483845 29 100.0 37 ............................. CAATTGATGCCTTTAAAGACTGCTTCACCGCATCGTT 1483911 29 100.0 37 ............................. AGTTCAAGACTTTTAATAACTCGCTCAATTAAAGTTT 1483977 29 100.0 37 ............................. GTCAATTTCCCTGCTTTTATCAAATTCGCTTATGAGA 1484043 29 100.0 35 ............................. CTTGTTCTGGCGACATAACGGATTTAATGTTACTC 1484107 29 100.0 37 ............................. CTCATTGAACCAGAGCCGGCTGGTATCTTGATTACTA 1484173 29 100.0 36 ............................. GTGTTTTCGGTTTTGGTGGTAACGCGACATAAGCGG 1484238 29 100.0 36 ............................. GAATGAAGCTGACATCGAGTCAACGCTGGTTCAATT 1484303 29 100.0 35 ............................. ATCTTTTTTCCGGCGTGATGAAATGCGGTCGTTGC 1484367 29 100.0 36 ............................. AAGCTCTCTTTTATCGGGATGTAAGATAACGACATC 1484432 29 100.0 36 ............................. AATCCAGCTGTCGTTCTAAAAATCTGACCCAATCAC 1484497 29 100.0 35 ............................. ACAAAGGAGATGAGCAACATGCGAAACAGGAAGCC 1484561 29 100.0 37 ............................. AGCTGATTTACAGACAGATGCGGTCGAAAAAGAGTTA 1484627 29 100.0 35 ............................. TACAAACACCGGCGGCGTCTTGAATACACCTAATT 1484691 29 100.0 37 ............................. TTGGAGGAGATCGTCACGACGATCAAGCCGTATCTTG 1484757 29 100.0 38 ............................. ATGTGTACGATTGGTCAAGATCGCTAAAAGCCTGCTCG 1484824 29 100.0 36 ............................. AATCAACACGAGTAAAATGACCACAGAACAAGATTT 1484889 27 86.2 0 ....................--.G....T | ========== ====== ====== ====== ============================= ======================================== ================== 90 29 99.8 36 GTTTTATCTGAACGGAGAGGGATTTAAAG # Left flank : ATGAACTATATAAACCGTTGAAAGCTTGGTGGTGAAACATGTTTGTTATCATTACGTATGACGTAGCGGAAAAGCGGGTCAACAAAGTTTGCAAAAAATTAAAGGAATATCTCACTTGGACGCAAAATAGCGTATTTGAAGGGGAGATTTCGAAAAGCCTGCTGATGAAGTGCATGTATGAATTGGAGATGATCATTGATAAAGAAGAAGACTCCATTTACTTATACGAAGTAGGAAATCCGAAGAATATAAAAAAGCGGGTATTTGGTCAGGAAAAGAATTTTGATGAGTTGTTCCTCTAAGTTTTAAGAATTTGCAGTGAACCTCCTTTTAGCGGATAAATGGGGAAAAGCTTGATTTATTAAGGGAAGTGTGTCATTATTTGCGCAGCATAGAAAACACAATTACTACTTTACTGCAAAATGAGGTATAATTGTTGTGTAGGCATTAGCCGGAATTCCTTGTTACATCAATGAATATTGCTTTGTAACTGATAGGGG # Right flank : TTAGCACATTATTTCAGAATCCCTTTTTCAAATTATTTCAGATGGATTCTGAAATAATGTGCAAAATTTTTGCGGATTATTGCGGATTTTGCACATTCTTTCGGAACATTTGCACGCTCTTTCAGATGAAGAATTTCCAGCGCGCCTGATGGACCGATGAAAAAGAAAAAGCACAAAAGAGGCCGATTTGGCCCCTTTCGTGCTAATGCCCCATTTCCTCTGCAGCCATGCGCACCACTTCTTCGTCAATGACGTCCTTTTTCAGCTGATGCCCGTACAGCAGGCACGTCGTGGCCAACGTGTTGATGACACGGGGCCAACCACGTGATTGCAGGGCAATTGCCTCTAACGCCGATGGGGTGAAGATCGGATGCTTGGCCCCGGCCTGTTTCATCCGATGCTCGATGTAGCCCGCCACCTCTTCCTTCTCCAGCGGCCCCATCCGGTATCGCATGATGATCCGCTGGTCGAGAGGGCGGTGCTGATTGAGCCGCAGCTTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGGAGAGGGATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 1488074-1488949 **** Predicted by CRISPRDetect 2.4 *** >NC_014206.1 Geobacillus sp. C56-T3, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 1488074 29 100.0 38 ............................. GTGATAAGGTTTTTTCATTCCTGCCATACATAAAGCAA 1488141 29 100.0 35 ............................. ATAACAGCACACCTAAAATATTACTGCACACCTTC 1488205 29 100.0 35 ............................. AACAACCGAAACCGCTCAATATTCATCAGAAACTC 1488269 29 100.0 35 ............................. CCGATGCGCCGCTGCCCAAGTTCACGGTCGATATA 1488333 29 100.0 37 ............................. TTGTCAGCTATTTTTGTATTGATATAATGGAATTTGT 1488399 29 100.0 36 ............................. TAATACATGTGACGGTCACGCCAAGACGTTTGCTGG 1488464 29 100.0 36 ............................. TTTAATGAAATCTTATGACCGTTATACTGGTAATTT 1488529 29 100.0 38 ............................. GTAGGATGGTATGAGTATTACACAGGCGGGGAAGCAAG 1488596 29 100.0 35 ............................. ATGGAGGACCTATGACCGTTCACATTCGCCGTGAC 1488660 29 100.0 37 ............................. TATTAAAGTTGGTAGGAGCCAAACGGGAAACATTCGG 1488726 29 100.0 35 ............................. TATTTGTACTTTAAACGCTTCACGAACTTTTTAAA 1488790 29 100.0 35 ............................. GAAAAAGCATTAGAAAACACAGAATTAATGTTAAC 1488854 29 100.0 38 ............................. GATGATCCTGACGGCTTAGGATTTATCGGCAATGATCT 1488921 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 14 29 100.0 36 GTTTTATCTGAACGGAGAGGGATTTAAAG # Left flank : CGAGCCACGTTTTGACCGCTTGCCAGATGACCGGCCGTGTATATTGAACATACGGGAGGAGAAAAGAAGGCAGCACACTCACGGTTTTACGGCACTCTTGACAGCGATATCGTGCGATCCAAAGGCGATACTCCCCCTCTGCCGTCAACGCATAGCGTTGGTAGTATCCGTGACGATGCAAGGGGCGGCGGGATGGACAGTGGGGGCATTGGTTCACGTCGGGAAAATCGTTCCCTTTCCCACGATCCGTATACGTTTGAATGTCAATGCCAAAGTCGTGAAACTGGATCACACTTCCTTCCCCCTCTCCTTGAAACGAATGGAAATCTTCGTCCGAAACAATTCACAAAAAAATTAGCACATTCCTTCAGAAAAGGGGAGAGGGCTTTCTGAAAGAATGTGCAAAAAAATGGGCGTTTTATGCTGAAATAAAATGATAATTTACAGAGAGGGATTTAAAGTGCGATGTTTAACCTCGTATTCAACGAGGCCCCTAATCT # Right flank : GATTACGGAAAAAATGTAACGTTGGTGACGAACAATGTTTTATCTGAACCCCGAGTTCGACAGTTTTGAGGCCATTTTAGGCAAATGAAAATGGTCAAAATGCTGTAATATCAAGGATTTCACGATGCGGATCCTAGAAAAAAACGCCGAATTTCATAGGCACACGATTTATTAATTTTTTCTTTTAAAAATAAAGTTTATACGTTATAATATAGGCATGTACATACGACGAGTCACACGCAAAAACAAGAATGGAACAACCGTTGCTTATCTCCAGCTTGCTCACAATGAATGGGATCCAAAGGCCAAATATGCGAAAGCGAAGGTGATTTATTCGTTCGGGCGCGAAGACGAGGTGGATCGCGCCGTCCTGGAACGTCTGGCCAAAAGCATTTCGCGATTCCTTTCTCCTGAGCAGGCTTGGGAAGTCGAAACGTTGACAGGAGAAGCTTCCGATGACTTTCAATTCCAGTCATGCAAACACCTCGGCGGCGTTTGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGGAGAGGGATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 3 1492910-1490918 **** Predicted by CRISPRDetect 2.4 *** >NC_014206.1 Geobacillus sp. C56-T3, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================= ================== 1492909 29 96.6 35 G............................ ACGTGGTACTACCGCCTGCGTGCGGTGAATGCGTA 1492845 29 96.6 35 G............................ ACGTGGTACTACCGCCTGCGTGCGGTGAATGCGTA 1492781 29 96.6 35 G............................ GGGAATAGGGTTGCCAAGTTCCACATTCCCAGCAT 1492717 29 96.6 36 G............................ TTTTATTATTAGGTCTTGGAACACCTACTATTTGCA 1492652 29 96.6 34 G............................ TTTCCACCGATCAGTACTTTCACTGATCCTTTTG 1492589 29 100.0 38 ............................. ATTGACAAATACGGAAGTAGGCATGTTATTGATTCACA 1492522 29 100.0 38 ............................. GCAGCTGTGCAAGCGAAAGGCCAAATGTATACTGAAAA 1492455 29 100.0 35 ............................. GTAGTATTTTGATCCTTGTATGCCGTCGTCTTGGC 1492391 29 100.0 36 ............................. GAGGGCTCTGTATGTGGATGTGGATTGCCATACGAT 1492326 29 100.0 39 ............................. CGACTTCTTTCCGCCTCTCTCGTGAGACTCTCGACATGT 1492258 29 100.0 37 ............................. TATGTCCCGTCGCATCAAGCCTCAAGACAGGCTTTCT 1492192 29 100.0 38 ............................. GTAAACCATTTGGAAACGTCGAACGGCGTCTTCTGTTT 1492125 29 100.0 41 ............................. GTGGCCGCCTTTGCTATTTTCATGGTTTGTGACTATATCAC 1492055 29 100.0 36 ............................. GACTCAAACCGGAATTCTTGTAATCCTCTATTCCTC 1491990 29 100.0 39 ............................. CAAGGAGCGAAGACAAGGGAGGAGTACCTCGAGGAACAA 1491922 29 100.0 34 ............................. AAAGAGCCGGATGAAGACCTTTAATCGTATACTG 1491859 29 100.0 36 ............................. GTATGGACAAATACGTTATTTCCCACTATTGAAAAC 1491794 29 100.0 38 ............................. CGATGAATTTATGCAACGTGATCCATATACCGGTCAAA 1491727 29 100.0 36 ............................. GATTAAAAACGTATCGAGCAATTTCACGAAATACGA 1491662 29 100.0 38 ............................. TAGTGCCACCATGTCGGCTAGTGTGTATTTTTTTCGCA 1491595 29 100.0 35 ............................. CGAAAATGGACCGTGGAAAGACCATTTTGACGAAA 1491531 29 100.0 35 ............................. GGTCTTGATTTTAGCGATTTCCGTAAAATCGACGC 1491467 29 100.0 35 ............................. CCTGTCTTGAGGCTTGATGCGACGGGACATATTGC 1491403 29 100.0 38 ............................. TCAGTTCGGGAACGCCTCGATACACGCCATCATTCGCG 1491336 29 100.0 37 ............................. GCAAGAGGGGGTATGCGTATGCGCGTCCGCATCATAT 1491270 29 100.0 35 ............................. TTGCTATCGTTTATGCATCAAGATCATTCGGCTAT 1491206 29 100.0 36 ............................. TAATGCCCTGCGTATAGGCGCGTTTGATTAATTCGA 1491141 29 100.0 38 ............................. GCAAGAAAAATTAAATGAAGAAGTTTATGCTTCTTTCA 1491074 29 100.0 35 ............................. GAACCGGCATGATCGAGAATCCAATCATTTCCGAT 1491010 29 100.0 35 ............................. GCCATTGGGTGTGTAATGAAAAATTCTACATTCGC 1490946 29 75.9 0 .....................CCCG.GTT | ========== ====== ====== ====== ============================= ========================================= ================== 31 29 98.7 36 CTTTAAATCCCTCTCCGTTCAGATAAAAC # Left flank : CTTTGCGATAAATGTGAATCAAGCAAGTGCTGATGACCTTGTGAATATCGGCCTCATACAAGCGGTCGAGATGACGGGCCAAGGCATCGTCGTTCAACCAGGAAGGCTGGAGACCGGGACGGATGAGTTTCTCTAGATCGATCTCCTGAGCCCATCGTTCTAAGTGAACAAGGGCTTGCCGGCCGTCAAACACATTGTAGATGATGGCCTGAACGGCATCGCTGACTCGCGTTTGGCATTGTGGATCGACGGGCACAAGATGGTCAATCAAGTGGGGGATGTCGAGTTTTTTGACTAGAACACTTATTATATTCAAATAACCATTACGATAGACCCCTTTGACTTTCACATTCATGAGAGAAAAACTCCTTTACGTTCCTTGTGTGTCAAGGATTCATTCGACATCGGAATGAAAAAATCCTCCCGATTTTCGTCGGAAGGGTGCGAAATGTGAGTAAAACCTTTATTTTGCGCCGAATGAGAAAAGAAATTTTCTCTCC # Right flank : CGACAGTCACTAGGCAAACAAAATGCCTCTCGCCCCTTGAGGCAAAAGGGACGAGAGACATTTGGGCACACTTTGGGCGTGTATCTAGGCGCGAGGATGGATGCCTAGGATCTTCGGAGGAGGCTCCAGCCCTAGAGCCGCAAAGAATTGAGCCTGTTTGGCCGTCAGTTCGGTTCGTTGATAAAGGTCGCCGTTTTTGGAAGAAAAATGTCCAAGCATAAGACGCTCACATTCATCCCTTACTTTCGGCCACGATTCATGGGTTCGGATCTCCACGATCCGAACTAACAAGAGAGCAAGCCAACTGAGTAGCACATGCGCCCGAATGCGGTCTTCCAAGCGATGATACATAGGTCGCAATTCCAATGTAGACTTCAATGTTCGGAAGGCCTGCTCAATATCCACCAGCTGCTTATACCCGATGGCGACATCTTCGGCAGACAAGGTGTCATCGGATGTCCGGATGAGATATTTGCCGTCGTACTTTTCCGCGTCACGAA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAAATCCCTCTCCGTTCAGATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //