Array 1 1360427-1359554 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP050868.1 Fervidobacterium pennivorans strain T chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================ ================== 1360426 30 100.0 40 .............................. AATTGCCGTGAAGGTATCCAAAACTTCGGAGATGTATTAT 1360356 30 100.0 40 .............................. CAAGTGTGTCTTAACTCAAATTCTTCATCACTGGATACAA 1360286 30 100.0 42 .............................. GAATATGCACTCTCATTCGCCTAAATGCTTGCAGGTCTTTGA 1360214 30 100.0 41 .............................. TTTCTACAATCAATATCAACCAAAACCTTGTAACTTTCTTC 1360143 30 100.0 42 .............................. TGTTGTTGACGATATCTCGAATTGTTGCTGGATACCATTTTT 1360071 30 100.0 41 .............................. TCTCACTTATAGCAAATCTATAAGAGATTGCTGAAGAGATT 1360000 30 100.0 38 .............................. GGTAATCGACACATATCGACGATTACCTTGCCTCAACA 1359932 30 100.0 40 .............................. CGTAAAACTCTTTCAATATTTTTTGCCAGCCATCTTCTTC 1359862 30 100.0 39 .............................. AAAAAGAGCCGCCGCCAACAGGTTGCTTTTTACAACCTA 1359793 30 100.0 37 .............................. ATAATTTGTTTTACTACTCTATCGTATGCATTTAACC 1359726 30 96.7 39 ......................T....... AGGGAAGAACAACAACACACCTTTATCCTGCTTATAATC 1359657 30 93.3 44 .........A...............A.... GAAAGGTCAACTGAGACTGAACTTTGAATAAGCAAGTGATTCAG 1359583 30 93.3 0 .................T..........G. | ========== ====== ====== ====== ============================== ============================================ ================== 13 30 98.7 40 GTTTTAGAAGTGACTATGAGGGATGGAAAC # Left flank : TGGAGAAAGTGGTTAGAGGAAAATCAATAACTACCAAAGACAGCATAAGTAAATTGAAGCTGAGAAAACCTGAGAGTATTTATACCAATAGTAATATTCAGTTTTGTTTTTTGCAACAGAAAATAGTAGTTCTCACTTGTAAATATTCCTGTAGACATTGGATTCAAAACATATTTTTTATTGGCATACTTGTAACTTAGTTAATTATAAAGCAATATAACAGAAACAATAATACATACTAAAGTAAATGCAAAAAGCCGCACCTCGTACCCAACATCGTCATAAACTATTAACATTATTCCCAAAGCTTTTGAAATCAAGATTTTTAAAAACCCATATGTAACGATTATGCAAAACCACAAAATTTAGCCATTTTTTCGGGGGATAGTTTCCGGTAATGATTAACCTAAAAAGGCATAAACACGAGGTTTTTAATTTTTACAAATGTAACTGTCAAATTTAACAAAAATAATGGTATAATATCTATGAGAGTTTTACGG # Right flank : CACGGAGCAATTAGGACATTCAGCTCTGGAAGCAGCTAAAAAAAATAAACGCCCTGGTGTTTTGCACCAGGGCAGTTTGATTTGTATTAGTTATGGAATCATATTCCCGGCAGCGATGTAAAGGCTATACCATTCTTCTCTTGTAAGTTCAACATCTTGCGCTTGGGCAATCTTTTTCAACCTATCCGGATTAGTTGTTCCAACGATTGGTTGAATCTTTGCCGGATGTCTCAAAATCCAAGCGATGGCGATTGCTTCTTTTGAAACGTTGTATTTCTTTGATAAATATTCTAATTTAGCGTTCAGATCAGGGAATAGTGGGTTGTCTATAAATACCCCCTGTATATTTCCATATTCGTTGCCATACTGGAATGGAGACCATGCCTGAATTGTTATTCCTTTCAGCCTGCAGTATTCAAGCACACTGCCGTCTCTATTGATTGCTTGTTGGAATTTCGTGTTAGCAAATATACCAGAGTCAATCATTCCGGTATTTGTCA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTGACTATGAGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 2 1503202-1501470 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP050868.1 Fervidobacterium pennivorans strain T chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================= ================== 1503201 30 100.0 39 .............................. AGTTCCAGAGCTCGATTTCACGTCTTACATCGTTAAACA 1503132 30 100.0 43 .............................. CTACGTCCTCTGAATTATTGAACTTGAAAACTAACACTGCGTC 1503059 30 100.0 42 .............................. CATTTTAAACCACTGCTTAATTTTTGCAAAGTCTTTGTCATT 1502987 30 100.0 40 .............................. TCGTCCTCACCTTCAACAAGTTTGATTTTCACTTCAAACT 1502917 30 100.0 45 .............................. CTGTTCAGTTTCGATTTTGCCATTTGGTTCACCTGCCATTTGACC 1502842 30 100.0 38 .............................. TCCTTGCTCTTCTGGGTATCTCGTTATGCAACATTTTC 1502774 30 100.0 40 .............................. TAATTCCCAGCTCGTAATCGAAGAAGTCGTTTTCGTATAC 1502704 30 100.0 40 .............................. AGATACCTAATTTCAACAGGCATATCACACGAATTAATAT 1502634 30 100.0 42 .............................. CGAGGGGCTTTCCCTCCTTTTTTTATTTTTTTCCCGGGCGAG 1502562 30 100.0 45 .............................. CCAAAACGTTCCAGGAACCTTAACTCTCTTGCTGTCATACCTCAG 1502487 30 100.0 44 .............................. TTCATTTTCTGGAAAGAACTTCACTGCCAACCATATCATACCCA 1502413 30 100.0 39 .............................. TAGAATTCCACCGCGTCCAATCCTACGCCTCATTTTATC 1502344 30 100.0 39 .............................. CAATAACATAAACATATCCGTTCTTCACTTCACTAACCT 1502275 30 100.0 40 .............................. ACTGTCAACATCGAAATATCTTTTACTGTACACCCTATAC 1502205 30 100.0 41 .............................. CAATTGTTTGGAGGAAACCCTGAATTTCCTCCTCTGTCCAT 1502134 30 100.0 42 .............................. CCCAGCTGGGAGTTGCTAAAACTGGAAATGTAGTCTTCCTTG 1502062 30 100.0 40 .............................. TGAGGCGGTTGGGGAACAAATCCCCGTCCACCTCTAAATC 1501992 30 100.0 41 .............................. ATAATTTATAAATATGAAACCCGGAAACCCTATCTCCACGA 1501921 30 100.0 41 .............................. TAGAATAATTCTTCACCATCGTATTTATCGATAAAATTCAA 1501850 30 100.0 43 .............................. TTGGAATCGTTTCCATTGCATAGAAAATAAAAAAGCTGGCTTT 1501777 30 100.0 41 .............................. TACCATGCCGCCGATACAATACTCAACATGCTTTCGCCTCC 1501706 30 100.0 41 .............................. ATAATCCTTTTTATAACTTCACTTTTCAACATACCTACCAG 1501635 30 100.0 41 .............................. TTCGCTTCAGCGTTTGCTCTGACTGTTGGATTTATTTTTTG 1501564 30 96.7 35 .........T.................... ATTATTCCGTCTGGAACTTGCCCTGTTTGATCGAA 1501499 30 86.7 0 .....................AG.A..G.. | ========== ====== ====== ====== ============================== ============================================= ================== 25 30 99.3 41 GTTTTAGAAGTGACTATGAGGGATGGAAAC # Left flank : CATTCCGCACCACAAATAGTCCACACACCTCTCAAATAGAATACCAGCTTTAAGTCGCTATCATTTCTTCCGTTTTGTTAATACATTATTTATCTATACATCACCTATTTGTTACCTGATTTTTTCTTCTCATCTGTAATTTTTCTTATCCAACACTTAATTCAGATTTTTTATTTCATACCAGCTTTTTTAGCCATTATACATCAAATAATAAAATTTTATTAACTCCAAAACAATCTTTCTGCAATCTTTTTAAACCCTCTTTTCCCGTTTTTACTTCATATTTTATTAATATTTTTTCAAAATCCTCATAAATACATGCCGCATTTTCTGCCCTTTGTAACGATTATGTAAACTCACAAAAAATCACAGATTTTTCGGGGGATAGTTTCCATTCGTGTTCAACCTAAATAGTTATAAATACGAGCTTTTCAATTTTTACAAATGTAACTGTCAAATTTAACAAAAATAATGGTATAATACTTATGAGGGTCTTACGA # Right flank : AATCAACTGAAGCGCTCGTATGCTTAAACGTTATTTCAGCAGAAGGAATAAATAGAAACAAAAAAGACCTCTGCAAATGCAGAGGTGCAATTTTTTTTGTTCTTGAACTTGAATGTACAGTATTAAATAAAAAACCCCAGTGAGCTTTTGCCCACTGGGGTTTGTTTTTATTGTTTATTACATCTGCTCGCTTGTGTTTGTTCCACCTTGAGCTTGTTGTTTGTAGAGGTATTCGCCTATTTTCATGCTTTCTCTTTGCAAGTCGTCGAATAGTATCTTGACTTTTGCGATGTCGTCTCTGTTGATTGCATCTCTCAAGTCCCTAATGATTTCCTCTAACCTGTTCTTTGTATCTGCCGGTATCTTGTCGCCGTTTTCTTTGAGTATTTTTTCGATGTGATATGCCAAGTCATCTGCTTTGTTCTTTAGTTCGACCTCTTCGCGTTTTCTTCTGTCTTGTTCTTCATACATTTGCGCTTCTCTAATCATTCTTTCGATAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTGACTATGAGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 3 1517478-1517863 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP050868.1 Fervidobacterium pennivorans strain T chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================= ================== 1517478 28 92.9 42 T...................A....... ACTTCCAAATCCCTTTGTATTTCCTGTTTGCCATCTTCTTGA 1517548 28 100.0 43 ............................ GCGGTGTTACTTTCACAGCTTTAACTAGGAGGTTTATCTCAAT 1517619 28 96.4 45 ................G........... ACTTTGTTCCCTGTTCTACCAAATTCCTAAGTTTCCTTGCACTTT 1517692 28 100.0 43 ............................ ACATTATTAAGACGAAGAAAAGAGGAAAACGGAAGTATTTGAA 1517763 28 96.4 45 ......................T..... TCTCGATATAGTATAATGATTAGTAGCACCTTATATTGACGTCCA 1517836 27 82.1 0 ..........A.G...-......A.C.. | G [1517855] ========== ====== ====== ====== ============================ ============================================= ================== 6 28 94.6 44 GTTTTAGAAGTGACTATGAGGGATGGAA # Left flank : TTAGAAAAATTTAAACAAATAAAAGCCAATCCTCATGGATTGGCTTTTTTTGTGATCGCTTAAGTCATTTCACAGAATCCCATCCTTTAAACCATACCCCTTTTGGTTATCACAATATTAATATTATCAACACCTATTTGTTACTAACTATGTGAACACACAACAGTAACACATATATCCAAAATTCAGAATAACTGTTTTGACAAATCAATGTACAAATAAATATCACAATTATCCAATAAGAAAACAAAAAAACGCACCACATTCAAAAGATACATTCATACGCCGTTAGCCACAATCCTAAAATTGTACTATACAAAACGTCTAAAATATCATTTGTAGCGATTATGTAAATTCACAAAAATTAATCATTTTTTCGGGGGATAGTTTCCATTCGTGTTCAACCTAAATAGTTATAAATACGAGCTTTTCAATTTTTACAAATGTAACTGTCAAATTTAACAAAAATAATGGTATAATACTTATGAGGGTCTTACGGT # Right flank : AGCAAAATTGCTTCCTTTATTTGTTTTGCAATGAGTGTCGTTTTGGAAGTCAGGATAAGGTATATAGACGCAGGCTGGCGTTTGATAAAAGTTTCTTTCCACGCGTTTTTCAAAAACAGTTGTGTTTGGTAAGAAGGTTTTGAGTGTGGTTGTGTTGAAAGATTTAGGCATGGAAAGTTAGGAGTTTTGTAAATCCAACTGTGGAGGTATCGAATATGGTAAAGGTACTTACGTTCTTGGGAACAAGTTCGTATCAAAAGGCTATAGTTAAGTTTGATGATTTTGAAACATCTCAGGAGTTATTCCCACTTGCTTTGTTGGAATTTTTGAAGATGAAGGAAGGCAAGGATATCTCAGCTGCGTTTTTCTTGACTGAGGAAGCTATGAAAACATACGATAAGTACAATGTTGAACGGTTTTGCAGTGAAAACGGCATCAAAGTCCAGAAGATTAAAATTTCGGAAGATGAAAGCGTAACTGATTTTGTACGAAAGGCTGCG # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTGACTATGAGGGATGGAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [2-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 4 1532841-1529887 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP050868.1 Fervidobacterium pennivorans strain T chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================================== ================== 1532840 30 100.0 41 .............................. GTCCAAATTAAAGGGCCATATCCACATTACGCATTGTTTTT 1532769 30 100.0 42 .............................. AGGTATGATATAACAGTGCGTGAAGAATCGTTTGGATTTATT 1532697 30 100.0 43 .............................. CCGTCAAAGAAGCGTTCTACTTTTTCGACTTGCATAAGCACGG 1532624 30 100.0 41 .............................. CTGGAAGAAATCGCGGTTTGGTATGTTGGAGCAGTTGAAGA 1532553 30 100.0 44 .............................. AGGTGGGTATTTAGAGGGTTTAATAAAGACTTCGGTAATTGGGC 1532479 30 100.0 41 .............................. CTGGAAGAAATCGCGGTTTGGTATGTTGGAGCAGTTGAAGA 1532408 30 100.0 44 .............................. AGGTGGGTATTTAGAGGGTTTAATAAAGACTTCGGTAATTGGGC 1532334 30 100.0 40 .............................. ACGAAGAATTGCGGCAACAGAGATATCTAAAAACCGTAGA 1532264 30 100.0 44 .............................. GAAAATACTTGAAGGGTTAAGAAGTTTAAAAAGTCAAAAAGCCA 1532190 30 100.0 37 .............................. TTTCTTGCTTCTCTTTCTCAATCTTTCTCATCGCTTT 1532123 30 100.0 40 .............................. AAAAAACTAGATGTAGATTTAGAAAAGTATGATATTTCAA 1532053 30 100.0 41 .............................. TGCCAAAGTCGAAAAGGAGGGCGAAAGTATGAAGATTACCG 1531982 30 100.0 41 .............................. GTTGAAAGTATGGTAAGGTTGTTAAACAGCGCGATGATACC 1531911 30 100.0 43 .............................. ATGGAAATTTTAGGCGCAAAAGATACGGATACAATCGTAACAT 1531838 30 100.0 38 .............................. GGAGTTTACGAAGTAGAAAGAGAACCGATTACACTTGA 1531770 30 100.0 41 .............................. TGTTGAATTCGCTTCTTCCACCAGAAGAAGTTCTAAAATCG 1531699 30 100.0 39 .............................. TAACGTGTTGCCACTGGTTGAAAACTACGGCTTGTTGTT 1531630 30 100.0 45 .............................. AGAAAGTTGCGGAAGGTTTTATTTTCTATCAGAAACAAGAAATTT 1531555 30 100.0 45 .............................. TAGAAGTGTTTTCTGATTCATTCAGAATTGGTGACAGATTTTATG 1531480 30 100.0 41 .............................. CGGGGATGAGGAAGCTGAAAGGGTTTTGAGCAATATTGATA 1531409 30 100.0 46 .............................. GAGGAGGGTGAAACTATGGTAGTTGGTGGAAGAGTGTCAGTGGGAG 1531333 30 100.0 41 .............................. AAAAAACTCGGCGGGATAATAGTTGAAGTACAAGTCACAGC 1531262 30 100.0 40 .............................. TAGCAAGAGAAATAACACCAGACGAGGCAAGGGACATCGT 1531192 30 100.0 40 .............................. TAGCAAGAGAAATAACACCAGACGAGGCAAGGGACATCGT 1531122 30 100.0 43 .............................. GAAGGATTCATTATCACGTAGTTTTGTTTAGCAATACGTTTAT 1531049 30 100.0 39 .............................. AATAACGATAGGTGTTCCGTTGGCGGTAAGGATGCTTAA 1530980 30 100.0 43 .............................. GAAGACGAAGCCAAAGAAGTACTAAAGGAATATGACGTATTCG 1530907 30 100.0 42 .............................. AACAAATTCCACAAGCAACAAGAGAAGAAATACTTAGTCTGA 1530835 30 100.0 34 .............................. TTTATTTAAGAGTGTCAAAGGACACTGAAATTAA 1530771 30 100.0 41 .............................. AACCGCTTGGCGAATTTGCAGACTTAACAAATCTTGTGTAC 1530700 30 100.0 37 .............................. GGAAGAAGCAAAACAGATTTACCACGAAGTTCAATCA 1530633 30 100.0 47 .............................. CAGGGAGTTCCTTGGGAAGGTTGACAAACTCGTTTCAAGACTTCCAC 1530556 30 100.0 47 .............................. CAGGGAGTTCCTTGGGAAGGTTGACAAACTCGTTTCAAGACTTCCAC 1530479 30 100.0 40 .............................. AGAAAAAAATAATTCGTGTATATACCTGCATGGGTCATAA 1530409 30 100.0 42 .............................. AATTAGAACGGCGTGGAATATTCCATGTTTATCCGTGGGAAG 1530337 30 96.7 41 .................A............ AGTTGTGATAAGGTACGAAGTTAAGAATTTGGACGATTTAG 1530266 30 100.0 40 .............................. GCACGTACTTTGTTGTTGACACACGTTAACAAACAAGACA 1530196 30 100.0 42 .............................. TCTTAGGTGTTTCAAGGTGGAAATCACCATTAAGGCTCTACC 1530124 30 100.0 42 .............................. AGAAAAAACTGGAGGTGTTTAGTATGGTGAGTTTGGTGGTGA 1530052 30 100.0 39 .............................. TTGAGTTTAGACTTCTAGCCCGTTCTTTGGGCCGAGGTG 1529983 30 100.0 37 .............................. GTTAAGAGACCTGCAAGAAATATTGAAGAATGTAGGC 1529916 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =============================================== ================== 42 30 99.9 41 GTTTCCATCCCTCATAGTCACTTCTAAAAC # Left flank : AGAAGTCATAAGACTCTCTTTCAATTCACACATATATTGATAGTAAAGAAATTAAATGAAAAAGAAATAATCCAAAGTATCTCAAGGAAAGGATTACCACAAGATAACGGACCAGCAGAAAGCTTTTTTAGTCATTTTAAAGAAGAGTTAGTAAAAATACATGGAGAAAAGACGGAAGAAGAATACAAGAAATTGATAGAAGAATATATAAGATTTTACAACGAAGAAAGATATCAGATTAGATTAAGATATCAGATTAGATTAAAAGGCATGACCTCAGTAGAGTACCAAAGTCATGCCATCTGAAAAGCAAATAATATACTTTTTTTATCTCTCTCACTTTCGGGGGTAAGTCCAATTTGCAGAGGGCTTTTTTTGTTTCTATCCATTACTTCTGCCAGCGCGGAAAAACAATCCACATTAAAAAAATCATTCAGCTACCATAAACAATCCTAAAATAATGGTTAATCCAAAGACAATATACGAACGCCCCAATGTTT # Right flank : TCGTAAAACCCTCATAGATATTATACTACTATTTTTGTTAAATTTGACAGTTACATTTGTAAAAATTAAAAATCTCGTGTTTATGCGTTTTTAGGTTAATCGTGACCGGGAACTATCCCCCGAAAAAATGGCTAAATTTTGTGTGTTTACATAATCGTTACAATATGTGTTTTGGGCAAGTATTATTAGTGCGGTTTTAGGAATTTTATTAATGATATATGAAGGTAAGTTTGGAATTCCTGGCATTTTTTGTTTGCGTTTAAAATAACCTGTATTTTTAGTTGTATTGCAATTTTATGTATTATGGTATATGTTTTTTCGAATAAGCTGTATTTTCAAAGATTTTGGTAAATATGTTTTTCAGAATGTGAGAATGATTGTGTTACTGTTATGTTCTTTCGTGGTATGTAACAAAAAGATGTGATGTATACTAATAGTGTAATAAAAGCTACGTGCAAGGTGTAAATTTGTCAAGTGAGCTAAAGTAAAATGAAACTGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATCCCTCATAGTCACTTCTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //