Array 1 55-4633 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRQU01000017.1 Flavobacterium sp. YO12 contig00017, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 55 36 100.0 30 .................................... AATACTGATAGTGCAGTAGTGCCAGTATAA A,A [69,79] 123 36 100.0 30 .................................... AGAAAAGATAAGAAGACTGGAAGCGGTTAG 189 36 100.0 30 .................................... AATGGCGTTGTTTTGGGTTCCAGTCAAACA 255 36 100.0 30 .................................... CAGAAACCCACGAAATAGGAGGGACTGACG 321 36 100.0 29 .................................... AGGTTTTAACAGACGAAAGAATAAAAACA 386 36 100.0 26 .................................... CTTTGGATTAAAATAACGATTTGACA 448 36 100.0 30 .................................... GTAGGCGCAGACATTCCGAAATCCAGACCA 514 36 100.0 30 .................................... CAGCCTACGTAAATTCCACAAAGCCAGTAG 580 36 100.0 30 .................................... TGACAATTATCAGGATTGAACATTAAACCT 646 36 100.0 30 .................................... AGATAAATCAGAATTTGAAGGACTTGATGT 712 36 100.0 29 .................................... AATTTGGTTTATCATAATCAAGAACAATA 777 36 100.0 30 .................................... GCTTTTTAATATATTCCGAGCCGTTAAACT 843 36 100.0 30 .................................... CTTGGATTCTGAACACCGTCCTTTACGCCT 909 36 100.0 30 .................................... ACAATGGAGAAGTAAACTTTTTGGTTCTAG 975 36 100.0 30 .................................... GAGACTGCGAGACAGAATACAACGGGATAA 1041 36 100.0 30 .................................... CTATTCTAAATTCTTTTGCATCCATAATCT 1107 36 100.0 30 .................................... CAGGCGTATTTCCTATAGTATTCTCCAATA 1173 36 100.0 29 .................................... TAATCAATCCATTAGCTTTTACAATAGTT 1238 36 100.0 30 .................................... AAGAAATCAAAACCGAGTTAATTGATAATT 1304 36 100.0 30 .................................... AGTTCCGATATTAACACCTGAACGATTAGC 1370 36 100.0 30 .................................... GTTCTTCTCTATTCATGACATTTCAGGATT 1436 36 100.0 29 .................................... GTCACTAAAAGACATCGAAACTTCGCCCG 1501 36 100.0 30 .................................... ACAATCCCGTAAAACCACGAGTGAGACCCA 1567 36 100.0 29 .................................... AATGAAATTGACATATTTCCAGAGCTTAG 1632 36 100.0 30 .................................... GGCTTTAGCTTAAATGTAAACGATGTAAAC 1698 36 100.0 30 .................................... CGGTACTGCTCAGACATACACGCATAATTA 1764 36 100.0 30 .................................... ATCGCCCCGCCAAAACCTTCAAAATGTTCT 1830 36 100.0 30 .................................... CAACCGCCGAAGTTTCATAACTTACATTCA 1896 36 100.0 30 .................................... ACAATGGCATTTCATGGGCAATTGTACAGC 1962 36 100.0 30 .................................... TTGTTTGCAAGCGTGCTAACGTGGCAACAG 2028 36 100.0 30 .................................... TTTACACCCGCCATTTTCACCAAGTAGATA 2094 36 100.0 30 .................................... GGAAGCTGTAGGAGCGTTGAATATAACAGG 2160 36 100.0 30 .................................... ATTCTACAAATGAAAAAGAAGTTACTCAGG 2226 36 100.0 30 .................................... TCGACTGTTCGTATTTTGAAATCATTTCTT 2292 36 100.0 30 .................................... ATGAAAAGTAATTTAAAATAATTAAAATGA 2358 36 100.0 30 .................................... CAGCCTTTCTTTCTCCCACTTCAACGGTTA 2424 36 100.0 30 .................................... TGTTTTATTAAAGATGTTCTCTACATCATA 2490 36 100.0 30 .................................... TTACCGTACTGATTGGATATACCTTTTGCC 2556 36 100.0 30 .................................... CTTACGATGAAACAGACAGAGAGCTACCAA 2622 36 100.0 30 .................................... GTATTCACACAGCGTTGCTTTTACTGCATA 2688 36 100.0 30 .................................... TAAGGTTATTTAAATGCTCTGGACTTAAAG 2754 36 100.0 30 .................................... TTGATTTTACCAAATACCCTGCCTCAACTA 2820 36 100.0 30 .................................... ATATAAGGAATAATAATACATCTAATAATA 2886 36 100.0 30 .................................... CTACCAAAACCATCAATTAATCCTGCGACT 2952 36 100.0 30 .................................... AATTTAGCAATCGCCAAAAAGCTTTGGGCT 3018 36 100.0 30 .................................... AACTGGGGCGTAAACAGCATTTAGAACTTA 3084 36 100.0 29 .................................... GTGTAGGCTTGTTGTTTTTCCTCTGCACT 3149 36 100.0 30 .................................... TTATTAATTTTACTTCATCATCAGTAGCTG 3215 36 100.0 29 .................................... CGATTACATAATGCCGTTAATTCCCCATA 3280 36 100.0 30 .................................... TTTAGTCGACAGCACTTTAAGCGCTGCCGT 3346 36 100.0 30 .................................... CGTGGTTTCCGTAACTGATATAAATACAGT 3412 36 100.0 30 .................................... CTTCTTGCGCTACTAAGTGCCCGCGGGCGT 3478 36 100.0 30 .................................... TGTAGGAAATGGCAGTACAACTAATTAACA 3544 36 100.0 30 .................................... ATGGATCATCATTATCAATGTATCAGGGTG 3610 36 100.0 30 .................................... TTAAGCTTGGTGATTTTATCTTAAGCTCCT 3676 36 100.0 30 .................................... ACTCTACCCCTAGAGTCAAACGAGTGAGGG 3742 36 100.0 30 .................................... CGTTTTTCCCAATTAGTTTACGAGAGAGCT 3808 36 100.0 30 .................................... ATTTAATAGACAGTTAAACGACGACTTTGG 3874 36 100.0 30 .................................... AATTATAATTGTCGACATTCAAGAAGAAGT 3940 36 100.0 30 .................................... GGAGTTGCAATTATATATCCACAATCACGC 4006 36 100.0 30 .................................... TATTCAGTTGTCCCTTCATAAGGCTTATCA 4072 36 100.0 30 .................................... TTAAGCATGAAACAATTGCGGGGGTTCCTG 4138 36 100.0 30 .................................... TCTGTCCTACAAGCTCGTCACGGTGTACTA 4204 36 100.0 30 .................................... AAATCAATCCCTTTAAGGTTGTGTCAAATA 4270 36 100.0 29 .................................... GCTTTTTCCAGAAACCTCGACCGCAATCT 4335 36 100.0 29 .................................... AAGCAACTGAGTAATGAAAATCTAAATGA 4400 36 100.0 30 .................................... TGCAATTGCATCAACCCATTGCGCACCATT 4466 36 100.0 30 .................................... CTACATGGACGCGCACAACAGGCCAAACAC 4532 36 100.0 30 .................................... AGATTAATCCAAAAAGCAACAACATGACCG 4598 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 70 36 100.0 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : TTAAAGATTAGAAAACACGATATTACAATGGAGAAGTAAACTTTTTGGTTTTAGG # Right flank : TAGTTGGCTTGTTTCCTTCTGATATATAGAGTTTTAGATGTAGATATCGTTCAGAAAAATGCCTCTTTTATAGTCTGATAACCCATAATTGAGGCATTTTTTCTATTGTAGGGTTTATTTGATAAGGTCTTGAACGTTGAAACTTTGCTAATAATTACAAAAGATCAGTTTTAGAATAATTCTAGTTGTGTAGGCTGAGGTGCTGATGGTAAGGCTGCTTTTCCCCAAAAATTTAAGATATTACCAAATTGCTTATCCGTTATTCGAAGTACACTTACTTTTCCTAATGGCGGAAGTAGTTTGTGGATTTTTTTTTCATGAACATCAGCGCTTTCGCTGCTTGCGCAGTGGCGTACATAAACAGAATATTGCATCATTGAAAAGCCATCTTTCAATAGATTGTTTCTAAATCCAGATGCATTCCGTCTGTCTTTTTTTGTTTCCGTCGGCAGATCAAAAAAAACAAACAGCCACATTATTCTGTATCCGTTAAGCTCCAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 495-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRQU01000075.1 Flavobacterium sp. YO12 contig00075, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 494 36 94.4 29 ...........................T.T...... AAAATATCGATTTAATCCTAAAAGACAAT 429 36 100.0 30 .................................... CGAATCCGCATTTTCAAAAAATACAGCTTT 363 36 100.0 29 .................................... TTGTTTAATTACGTGTTAAGTTAATATGA 298 36 100.0 30 .................................... ATAAGAAGAATTACACGGATGACATCAACC 232 36 100.0 29 .................................... AGGGCGGTTGAAAGATACCGCAAAGCGCA 167 36 100.0 29 .................................... TTATGCGTTGATGAAGTTTGGTTTGTTGA 102 36 100.0 30 .................................... ACAATGGAGAAGTAAACTTTTTGGTTTTAG 36 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 99.3 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : TCCAACTTATCAATTGCCAGCAGATGGAAGTAAAATAATTACCACTTTGCATATTAATGATATGTTTTTATTGGGGGTAAATGAAGATGAAATTAATTGGAAAAACCCTGATTTTGATTTACTAAAAGAACATTTATATCGAGTACAGAAATTGTCATCTAAGTTCTATGAATTTCGACAAGGTTCGCAAGCGTCAATTCAAAATAATTTTTTGCCATTTTACAGAAGAATCACAGGTTATGGAGAAGGGATAGGAGGTTGGTTAACTCACAATCCAATAAAAGTAAGAATTTCAGTTTCAGGAAAAATTTCAAAAATATAATTTTACTTTAAAAAATGGTGTAAATACTATCAAATCAAAGGAGATGAAAAGATAGAGATTATTACCATTATCGGAAGACAAGATTTTGATAATAGTTCTTTGACATAATTCAAATCTTAAACATCCAAACCACAACGAAAAGGTATGGCATTCGCCCAGCAGGAATGCGATGAAAGCA # Right flank : T # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //