Array 1 18934-19144 **** Predicted by CRISPRDetect 2.4 *** >NZ_MZNI01000002.1 Gilliamella apicola strain Aw-17 NODE_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 18934 29 100.0 33 ............................. CAATCAGGCTAATCAACTAATGCAAATGCGCGC 18996 29 100.0 32 ............................. ATTTACAGGCTCAAATAGAGGTTTTGGAGAGC 19057 29 93.1 30 ...........G..T.............. GCTAGACACACACTACACAGACCCAGAGCT 19116 29 79.3 0 ............C..........TTTT.T | ========== ====== ====== ====== ============================= ================================= ================== 4 29 93.1 32 ATGTTCCCTGTATACACAGGGATAAACCG # Left flank : TAACATTAACTTTATAGCATTAATTAGCCAGTAATAAAAATACCTGTTAAATCAAAACAATTTGCTTAAAAAACAACCCAAAAAGTTGGTAAAATTTTAATTCTCCTATTTTAATTATAAAACAAAAAGTTATAATTAGAGTGTTCCCTGTGCACACAGGGATAAACCATTGGAAAAACGCTAAAAATCAATCTTAGGTGCATGTTATCTGTACATACAGGGATAAACCGTCGATGTGTTAATATTACATAGCATTTTTTTGCTATTCAAAAAATCGCAATTCTATATTTTAATTTTATTGTTGACCATTTTTTAATTACATGAAAAATATAAATTTATCGGTAGAATCCCGTAGAATCTAATTTTAACTTCCATTAATTTTAATTAATTTAATAAAAACATAGTGTTATGAATTATGATTTTGATGAAAAATATCTCAAAAAACCGGTAGAAATTTGACGGTCAATATTTTAATTATAAAACAATATGTTATAATTGGT # Right flank : TTTTATGCAAGATTTTGCTAATTTTTGTTAAAAAGTTTCAGGTTATGCCTACGTTTCAGTATAAAAATATATAAAATTAATCTAGTTAACTGATCAATTATCCGATGCACAGTAATACGTTATCAAGAGACATAATAACTAATGTATTAAAACCATACTTCAACAAAGTGAACAGTTAAAGTAACGTTTTGTTAGTTCTTGATGTTCATTGGTTATCTTCGTACAATAAAAAAAATTTTTATTTTGGTTTGTTATGCAATTACATTTAGTGGTTAATACGTTTGGATCTGACTTGCAGCATCGTTATGGAGAAAAGATCTATAAATTAACGTTACATGGTGGATTTAGTTGTCCAAATCGTGATGGTACTCTTGGTGTTGGCGGTTGCACTTTTTGTAATGTTGCGTCAATTATCGATGAATCTATCCAAGTTAAATCTATTTCTGACCAGCTTGCAACTCAAGCGCATCAAATGAAAAAATCAAAGCGTTATCTTGCCT # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCTGTATACACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: F [matched GTGTTCCCTATACACATAGGGATAAACCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 7339-7546 **** Predicted by CRISPRDetect 2.4 *** >NZ_MZNI01000037.1 Gilliamella apicola strain Aw-17 NODE_37, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =================================== ================== 7339 26 100.0 35 .......................... CCGTATCGCGTAGGGCTGTTCGAGCTGGTGCTGTA 7400 26 100.0 34 .......................... CCGGAAAGGGGGGGCGTTCGCCATACCTAACATG 7460 26 92.3 35 ............C.T........... CCGGCAGAACTAGACACAGAAGCAATCAGTGGATA 7521 26 88.5 0 GC...........G............ | ========== ====== ====== ====== ========================== =================================== ================== 4 26 95.2 35 ATGTTCCCTGTATACACAGGGATAAA # Left flank : TAGTATAAAAAAATCAATAAATAATTTATTTTAAATTTATGGTTATAAACAACACACCATGTTGAGCTAAGATAAACGTTTACTATTAATATTGAGTAATAGCTTACAAATAACAGCGTTTATAAAATTATTTCAATTCAAAAAAATATATTGAATTACTCAAAATTACAGAAATGCACTTTCAAAAAATGAGTACTTGAGATTAATTTGTGAAAATTTTATAACTAAACTACATCAACAAACAACTTAAAAAGTAGAGTTATTTTGATAACAACAAATCATTAAAAGCAGAACAATAAAAATTCCCATTTTTTAACTAAATGAAAAATATAAATTTATTGGTAGAATTCCGTAGAATCTAATTTTAATTTCCATCAATTCTAATTAATTAAATAAAAACAGTGTGTTATAAATACAGATTTTAATACAAAATAGCCTAAAAAATTGGTATAAATTTGGTGGTCAATATTTTAATTATAAAACAGTATGTTATAATTGGT # Right flank : ATCATAATAGATTAGAAGTTGTTAATTTTATATGAATGGATTCTAAATATTATTTATACGACATATATTTGATTGATTAATGAGTTTTTAAGGTTTGCATGGTAAAAGTATAAAATAAATGAATTTTTACCTATCAGTATAGATAAGCAACTAAACTTATAAATACAAAGTTATTTTATTGATTATGCTCAATAGCGCTTACAGAATTTGTTTTGTTTATAACTGCATATTACGATCTCTTTCCATAAAATAGTTTATGAAAAGTCTTCATTTCAAAAGGAATTAATAATTTATTCACTTAACTGCTTTGGTGGTTTTTTATTGCCCAAATTATCTAAATAAAATACTATTACCCAAAATAAAATTTAAAGTATGAAAAAATTTAATTATTTTATCATCTGTTATTATTCAATAATAAATGGAAGTAAGGAATGAAAAATTTAATTGCAATTTCAATATTAACTTTGATCGGTTTCAACGCTTTTGCTAATGATAATGCA # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCTGTATACACAGGGATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTGTTCCCCGTATACACGGGGATAAA with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 33701-33184 **** Predicted by CRISPRDetect 2.4 *** >NZ_MZNI01000014.1 Gilliamella apicola strain Aw-17 NODE_14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ===================================== ================== 33700 26 100.0 35 .......................... CCGGTAACTAAGGTCAATAACACGGATGTTACGCT 33639 26 100.0 35 .......................... CCGGGTTAGAATTTAGTACATTTGCAGAATTAAAA 33578 26 100.0 35 .......................... CCGTTAGCAGTTTTCATAATATCATCAATAGATTC 33517 26 100.0 35 .......................... CCGACACGGATATTACCATAGGCGGAGATTTCGGT 33456 26 100.0 35 .......................... CTGGGCGTATAATTGATCGCCCTTAGTTAATAGGT 33395 26 88.5 35 .............G..T.T....... CCAAAAATGAAATCGATTACAGTTTTTGTGAAATC 33334 26 92.3 37 .........A......T......... CCGCTATAGTAATGGTACGCACAGATAATGCGTACGT 33271 26 96.2 36 ..............G........... CCGGTTATATATTTGCACTAAATTACGCCCTTCGGC 33209 26 96.2 0 ........................T. | ========== ====== ====== ====== ========================== ===================================== ================== 9 26 97.0 36 GTGTTCCCTGTATACACAGGGATAAA # Left flank : GCTTATTGAAGAAGTTTTGTCCGCTGGTGGTATCGAACCGCCTCTACCACCTGATGATGCCCTGCCACCCGCTATCCCAGAACCTCAATCTCTAGCCGATAGTGGCTTTAGGAGTCGCTAATATGAGTATGTGTATTGTGGTAACTGAAAATGTTCCACCACGATTACGTGGACGTTTAGCAATTTGGTTACTTGAAATTAGAGCCGGAGTTTATATTGGTGACATATCAAAACCAATAAGAGAAATGATATGGCAACAAATTGTTAAACTAGCAGAAGAAGGCAATGTTGTCCTTGCTTGGGCGACTAATACAGAATCAGGATTTGACTTCCAAACTTATGGCGCTAATAGAAGGGTTCCGGTAGATTTAGATGGACTAAGATTAGTCTCTTTTTTACCTATTGAAAATCAATAGGTTAACGTTCTTTAAAAAATTAAAAAAATTGGTAGATTTTTGGGTTGCCAATAAATCTAAATAAAACAATTATATATATTTAGA # Right flank : TAGTTAGATTAATTAGGTAAAGTAATGAAAGGCTTTTAGCTACAGGGTTATAAGCATATCTTCTCCTTAAAGTCTTAATAACGTTTTAACTTTATTTCTTTACCAATAATAGACATATATTTACTTTTATATTTTCATTAACATAAAAAATCGAATAATATTTATTAAAAATCTTGGATAGCTGTAAAATTCGTTTTAAAACACTAAAAATAAAGGTAACAGTTAACTAACTAAACTAATAATCAAAAATAGCGTACAATAGCGCGATATTAAACATATGATCATCATAAATAGTTTAGGAATTTAGCATGACAGGCAAATTTATTGTCATTGAAGGTATTGAAGGTGCGGGTAAAACGACAGCAGTCAATACCGTTGCTCGTATTTTAAATCAATATCATATTTGCGATTTACAATTTACTCGTGAACCAGGTGGTACACCAATTGCTGAAGCATTACGCAATCTTATTAAAAATGGTTTAGATGATGAACCTTTGACG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATACACAGGGATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: R [matched GTGTTCCCCGTATACACGGGGATAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.20,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //