Array 1 249059-252925 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTDH01000003.1 Klebsiella pneumoniae strain K304 K304_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 249059 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 249118 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 249179 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 249240 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 249301 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 249362 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 249423 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 249484 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 249545 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 249606 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 249667 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 249728 29 100.0 32 ............................. GAACGGAGGAATATAAGAACAAAAGCCCGCAG 249789 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 249850 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 249911 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 249972 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 250033 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 250094 29 100.0 32 ............................. GACCTGTCATGACGGAAATAGCGGTTATAAAC 250155 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 250216 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 250277 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 250338 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 250399 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 250460 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 250521 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 250582 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 250643 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 250704 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 250765 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 250826 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 250887 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 250948 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 251009 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 251070 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 251131 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 251192 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 251253 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 251314 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 251375 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 251436 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 251497 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 251558 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 251619 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 251680 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 251741 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 251802 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 251863 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 251924 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 251985 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 252046 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 252107 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 252168 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 252229 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 252290 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 252351 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 252412 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 252473 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 252534 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 252595 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 252656 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 252717 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 252778 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 252839 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 252897 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 64 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //