Array 1 1669457-1667019 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP060115.1 Fusobacterium hwasookii strain KCOM 1253 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1669456 30 100.0 37 .............................. GCTTTTGTATATTCTAAAATTATTTCTTCAGTTGGAA 1669389 30 100.0 37 .............................. CTGTCTATGTTTAATATGCAAATATCGCCAATTTTAT 1669322 30 100.0 37 .............................. ATTTTTCTTATTTCTAGCATCATGTCCTCCTGTTTTC 1669255 30 100.0 38 .............................. GGGTTTTCTTCTTTTTCCTGAAAGTTTTGAAACAGTTC 1669187 30 100.0 38 .............................. GTGGTATTTAATAAATATTAAAAATATAGATAAAAAAG 1669119 30 100.0 35 .............................. CAACTAAAAAATTACTAACTCTAACAGTTTCTTCT 1669054 30 100.0 36 .............................. GTGCCTTTCATTCCAGGGGTTAAAGGTTAAAATAAT 1668988 30 100.0 36 .............................. TGTTCTAAAACTTTATCTATAGCTTTTTCAAAATTA 1668922 30 100.0 36 .............................. ATACAAATTGATATTCAAAGTAGATTTTTATTAAAC 1668856 30 100.0 35 .............................. AGAATTTCTATAATATTTATATTGTTACAATTACA 1668791 30 100.0 38 .............................. AGAGTTATAGCAAGGACTATTTCTAATAATGTAATTCA 1668723 30 100.0 36 .............................. AGATGAAGAAAGAAATATTAGCGAACAAGGAGTACA 1668657 30 100.0 36 .............................. TTAGCAAGTTTTAAATGTATTTCTTTTCTTTTCTTC 1668591 30 100.0 36 .............................. GCTACCATAAAAGCAATGTCTTTATCTCTACATCTC 1668525 30 100.0 38 .............................. ATAGTATTTGATGGTGCAGTAGGAAGCGGACAGTTAGA 1668457 30 100.0 38 .............................. ACACCAGGAAACAAAATATAGAAACCATATCTTTTTGT 1668389 30 100.0 37 .............................. GGTTGACTTGTGTATAATTCCAATATTATTCCGTTTT 1668322 30 100.0 36 .............................. AATAAATCTAAAACATTCCAATTTTCTTTGCTTGAA 1668256 30 100.0 36 .............................. TGTCTAGGTGGAAGATTTAAAATAAGAACTTCATCT 1668190 30 100.0 35 .............................. TTATTAGATGTAAATTTACAAGATACAACACAAAA 1668125 30 100.0 38 .............................. ATTTTTCTGAAAATGGATGATACTTAATTTTATTTCTA 1668057 30 100.0 37 .............................. TCAAATTTAATTGTTAGATTTGGTGGTGGAGTTTCAA 1667990 30 100.0 37 .............................. ATCTCCTAACAGGTCTAATCTGTAATCTCTAGCATAT 1667923 30 100.0 37 .............................. AGTCTATATTTAAAAGATGGAAATAATTTATTATTGG 1667856 30 100.0 35 .............................. TTGTCAACTATTGCTTTTACAGCTGTAGTCAATAA 1667791 30 100.0 37 .............................. AATGAAACTCTATATTTTAGTGCTTCTTATAGAAATA 1667724 30 100.0 36 .............................. ATTACTTGGATTATAGCTGGAGTTGCTTTAGTTATT 1667658 30 100.0 39 .............................. CACAAATCTATAAACTTCTAATTTCTCTGAGTTCTGTAT 1667589 30 100.0 36 .............................. TAAAATCAAATTTTAATTATATAATTTCTCTCTTTT 1667523 30 100.0 39 .............................. ATTACATCAGTTTCTTTTAATTTGCTAACATCTAAGAAA 1667454 30 100.0 38 .............................. AATAATTTTACAGTGTATTTTGAAGGTAGAAGGATAAG 1667386 30 100.0 37 .............................. ATTCTGCTCTTCTGCTGTTCTAACTCCCGCAGTTATC 1667319 30 100.0 39 .............................. AACATAGCAACAGCTGCATCATCATTAATCAATGATTCA 1667250 30 100.0 37 .............................. TTATTTAAACTTGCAAAAAGTTCAACCATTCGTATTT 1667183 30 100.0 39 .............................. TAGTGACAGAAATAACTTGACCTGATAGCTGTAGATTTC 1667114 30 100.0 36 .............................. TTAGATTTAAGAATAGAGAGTGACCAGGATTTACAA 1667048 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ======================================= ================== 37 30 99.9 37 ATTTATGTATTTCTATATTAGAATTTAAAT # Left flank : AATCTTTTCAAATGTGGTGGTGATAAAATGTATGTAGTTGCAGTGTATGATATTTCATTAGATGAAAAAGGTAGTCGAAATTGGAGAAAAATTTTTGGAATTTGTAAAAGATATCTTCACCATATTCAAAACTCTGTCTTTGAAGGAGAATTATCAGAAGTTGATATTCAAAGATTAAAATATGAAGTTTCAAAATATATTAGAGATGATTTAGATTCTTTTATAATTTTTAAATCAAGAAATGAAAGATGGATGGAAAAAGAAATGCTAGGTTTACAAGAAGATAAAACTGATAATTTCTTATAAATTTTATTGTCTACCTCTGATAATGTAAAATTAGTGGAAGAATGACAAAAGTTATAAAATCGTTTATTTATAAATAAATTTAAGAAAACAAAAAATTTTAAAGAATCAAAGTTTTTTATTTTTTACTAAAAAAACTTACATTGACAAAAAGATATTAAAAAAGTATTATGTAGGAGTAGCTTTTTTAGCTATCT # Right flank : TAAATCAGTTTTTATAGTGTTAAGTGTAGCTTAATAAAGTAAATTAAAAATTAAATATAGATAAAGTAATAAAGAAAATAAAAAAACGAATTTAAACTAAAACATTAATATAATGAACATAAAATTTTAAGATGGTGAAAGAAAAAAATTAAATGTAAAATTAATAAATTTTTAGCAAAAATTAGGTAAATTTCTCAATAAAAATATTGCATTTAATCATAATCAGTGTTAATATATACTTAATAAATTTGAAAGATAAATTTAAGGTTTTATCTACTAAAAATAGGGAGTGATTATAATGAGTTTTTTAGGACAAGTTAGAAAGAAAGCCTTACAAGCAAACAGAAGAATAGTTTTACCTGAATCAAGTGATGAAAGAGTAATAAGAGCAACTTCACAAATTTTAAAAGAAGGTTTAGCACAAGTTATTCTTGTAGGAAATCATGAAACAATAATGAATAGTGCAAAAGCTTATGAAGTTTCATTAAGTGGAGTAAAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATGTATTTCTATATTAGAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:90.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 2226214-2224748 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP060115.1 Fusobacterium hwasookii strain KCOM 1253 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 2226213 36 100.0 43 .................................... CTCTATTATTGCAAACTTGCTTTCTATTTTCATAATATACCTC 2226134 36 100.0 40 .................................... TTATTTGGTTATGAAAAAGGTTCTTTTGAAGGAGCAGCAT 2226058 36 100.0 41 .................................... TCTAATTGTAGTTATAGCTATTCTTACAAATCTATCAGTAT 2225981 36 100.0 38 .................................... ATGTTTCTTTTTGTTTATTTTCATCTACTCTTTTGATA 2225907 36 100.0 39 .................................... TATAATGACAATAAATGTTATTACATTTTTCTAATTTAT 2225832 36 100.0 40 .................................... ATACTTACAAGCCATCTTGTATTAAATGTATTTTAGAAGT 2225756 36 100.0 41 .................................... AAGAAAACTAGGGAAGTTGAAGTAGAAATAAAAAGTAACTA 2225679 36 100.0 35 .................................... TGTATCTAGGTTGTCATCTGTAATTGTATTATTTA 2225608 36 100.0 41 .................................... TCTTCATCACCGTTCAATCTATACTCATCTCTATTACTATC 2225531 36 100.0 37 .................................... TATAAAGTTTTTCTAAATTTGCTAAAGCTATTTCTAA 2225458 36 100.0 34 .................................... TTAGTATTTTTTACACCTCTTGAATTTAAAGTTG 2225388 36 100.0 43 .................................... TCACAAACTTGTGTACTAACCATTGTACGATTATCACCATATA 2225309 36 100.0 40 .................................... CAACTGAAGAATAAGATTCTAACATTATATCTTCTAGTGA 2225233 36 100.0 42 .................................... CCAATATTTCTAATTTTTTGTCTTTCATTACGTGAGTGTAAA 2225155 36 100.0 39 .................................... TATCTAAAGAAAATTCTCTCATTAGAGGCTGTTCTTCCT 2225080 36 100.0 40 .................................... CAGTACCACACGGCTTTTAAAAACCATTTAACTTTAAATT 2225004 36 100.0 40 .................................... CTTTACCTACTCCGTTGATAGTATCATTTTTATTTAATAC 2224928 36 97.2 40 .....A.............................. GGTAATTTAGAAACAAATTCTTGAACTGCTTTCTTTTTGA 2224852 36 97.2 33 .....A.............................. AATTTTATTTTAGATATCTTAAACTATACATTA 2224783 36 72.2 0 .....AA.....................TTCCTTTT | ========== ====== ====== ====== ==================================== =========================================== ================== 20 36 98.3 39 ATAAGTGAGAATATAACTCCGATAGGAGACGGAAAC # Left flank : GCCAATATATACAAATCAGTTTTAATCAGGTGATATTTATGGATAATTGGGATTTTTTAGATGAAGATTTTGAAAAGGAAGTTTTTGAAGATAACTTTACGGTTATCATAATTTATGATATTATATCCAACAAGAGAAGAACACAATTATCTAAACTTTTGAGTGCATTTGGATTTAGAATTCAAAAATCTGCATTTGAATGTCTTTTAACAAGAGAAAAATATAAATTACTCATTGAAAAGATTGATAGATATGCAAAGCCAGAAGATTTAATAAGAATCTATAGATTAAATCAAAATGTAGTAACTCAAATTTATGGAGAAAAATTAGAAATTGAAAATGAGATGTACTACTTTTTCTAATGAAAAGTAGACGATATGATAAAAATGGGAAGTTCAATATGATTTTTGATAAAACAAAATATAAATTTTTAAAATTTAAAAAGTCACACGATAATAGTTTTATAAACTATTGCAAACAAAAGTTTTTTTGAGTATAGG # Right flank : ATTGACAAAAAATCAATATATTTTTATAATATTAGTATAAGAAAATAAAAAGATAGAAAAGTCTAAAAACACTACCATGTTATAATATTTAATCAAGAATTTCTCACAATTGAAATTTTTATAGAAAGAAATAAAAACTATTTAAGGAGGAATTTTATGAAAAAATTATTATTTTTAACATTATTTGTAGGAATTTGTATAACTGGAGTAGCAAGTACAAAAGAAAAAAATCCAATTCTTATGAAACAAGTATTTAAAAAGGAAGAATTAATAACATTAGACAAAGAAAATGTAGCAGGGGGAAAAGGAACTTTAAAGGGAAAATTTGCTTTTACTAGAGATATGGCTACTGAAGATGAAGCCATAAAAGAAATAGGTTGGATGACATTAAACAAAGGAGAATCTGTTGGAGTACACCCTCATAAGAATAATGAAGACACTTACATTATTATTTCTGGAGAAGGAATATTTACAGATGGTTCTGGAAAAGAAACAGTAGT # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAAGTGAGAATATAACTCCGATAGGAGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.30,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [88.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //