Array 1 40787-43261 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYXY01000002.1 Jinshanibacter zhutongyuii strain CF-917 Scaffold2_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 40787 29 96.6 32 ............................A ATCATCCCGGTTTCCTGCGACAACACAAATCC 40848 29 100.0 32 ............................. CATCTGGCGGCGCGTAATGCCGAGATTGAGGC 40909 29 100.0 32 ............................. GGTTGATTACATGATCACCAGTCAGGACGGTG 40970 29 100.0 32 ............................. CGTTCCTTGTTGAAGCTGCGTGAATTGCCTTC 41031 29 100.0 32 ............................. CACGCTAATTTCATCACTATTGAGTTCAATAA 41092 29 100.0 32 ............................. GGGATTGGTGATGGGGAATGGGGAATGGGGAA 41153 29 100.0 32 ............................. CCATGAATGCGCTCGAAAATGTGAATCAGAAC 41214 29 100.0 32 ............................. GTAGGTATCCTCTTGCAGGCTGTTCATCTTTT 41275 29 100.0 33 ............................. TGATACGGGGTTGATCATGCTTACCATAAAGCC 41337 29 100.0 33 ............................. CCAGTGCTTCAGCTTAGATAAAACAGCACTGTC 41399 29 100.0 32 ............................. GTGAGCAGTCCGTCTGAGTCATTTCGGAATCG 41460 29 100.0 32 ............................. AAACATTCTCGAATGTGATTGATTTCATTACT 41521 29 100.0 32 ............................. CTACTAAAATGGCTCGAATGTCACGACAAACA 41582 29 100.0 32 ............................. CTTATTGAGATTGCAAAATGCCTTTATGTCCG 41643 29 100.0 32 ............................. GCATTACTGGGTTGGGAGCCTGAAAAATGTTA 41704 29 100.0 32 ............................. ATCTACTACATCATATAGGCTGAAGTCTATTC 41765 29 100.0 32 ............................. TTTATCGGGTAATGCTTTTTGAGACATCTTCC 41826 29 100.0 32 ............................. CGGATGATAGCGGCGTTTCCGGGTGGCAAGTC 41887 29 100.0 32 ............................. GAGCGCAATCTGATTGCGATTTGTGAGGGTGA 41948 29 100.0 32 ............................. CGCATGGTCAGGCAGGGGATATGTACTTCACA 42009 29 100.0 32 ............................. GCGTTAATAGCATTCTCACTTTTTACGCCCCT 42070 29 100.0 32 ............................. ATTAACTATCTTGGGAATACCGGACCGGCCAG 42131 29 100.0 32 ............................. CTGAATCGCTGTCTGACCCTGGGTTAATGCAA 42192 29 100.0 32 ............................. GTGAAACAGCAACACTCCGTAATCAATACAAC 42253 29 100.0 32 ............................. TTTATGAACGACAGGCAGATGGCTCACGAAAA 42314 29 100.0 32 ............................. TGAGAGGAATATTGAATGAGGCAATAGATAAA 42375 29 100.0 33 ............................. TTTATCGGGTAATGCTTTTTGGGACGCCTTCCA 42437 29 100.0 33 ............................. GATCATCATCCGGTTCAACGGATGTTGACTGGA 42499 29 100.0 32 ............................. GGGTATAAAAAAGAAATAAGTACATATGGTAA 42560 29 100.0 32 ............................. ATATGTGATGCGTTCAGACACATCATCAACTG 42621 29 100.0 32 ............................. GGGGTTATCTGATGGGTAATTTTTGGTTTCCG 42682 29 100.0 33 ............................. CCCAGATTTAGGAATATAAAAATCCTTCCTGAC 42744 29 100.0 32 ............................. TGGAAAGGAGTGGTGATAAATGACCATTGATG 42805 29 100.0 32 ............................. AACTCACTCAGGGCGAGCAGGTTGGTGAATCT 42866 29 100.0 32 ............................. GTGATGTTGAGCATGAGGGTGACAGCAAACAA 42927 29 100.0 32 ............................. ATGGATGTATGTTCCTGATTATGGGATTTACT 42988 29 100.0 32 ............................. CATCTCGCGGACTCCTTTGACCGACAAATCAG 43049 29 100.0 32 ............................. GAATAATTCATGACTCAATTAGACGCATCAGC 43110 29 100.0 32 ............................. CTTTCAGGGTTACCATAACCATAACCTGATAT 43171 29 100.0 33 ............................. GCTTTAAATGTTCGCCCGGAATGGTTGTCTAGC 43233 29 93.1 0 .............C.............T. | ========== ====== ====== ====== ============================= ================================= ================== 41 29 99.7 32 ATGTTCTCCGCGCTAGCGGAGATAAACCG # Left flank : TTGATTGAAGAAGTTTTGTCTGCTGGTGAAATTCCATTGCCTGAGCCTTTTGTTGATGCCCAACCTCCCGCAATACCTGAACCAGAATCATTAAGTGATGTGGGATATAGGAGTAAGGGGTAATGTCAATGTTAGTGGTAGTGACTGAAGCGATACCTCAACGTTTAAGAGGGCGGCTTGCTGTTTGGTTACTTGAGGTTAGAGCCGGTGTTTATATTGGAGACACTTCACGCAAAGTAAGGGAAATGATTTGGCAACAAATAATACACCTTGCTGATGAAGGTAATGTAGTTATGGGGTGGGCGACAAATACAGAGTCAGGATTTGATTTTCAAACATGGGGTGAGAATCGTCGTATTCCGGTAGATCTGGATGGGTTAAGGTTGGTCTCATTTTTACCTATTGAAAATCAATGAGTTATTGTTCTTTAAAAATATGAAAAAGTTGGTGGATATTTTAGAGTGATAAATGTCATTATAAAACAGTTAGATAAATTTAGT # Right flank : GTCACCATACCGATATTAACTCCGATTTATTTAATGTTCTTAACACGACTAGAGATTAATATAGCTATTGGCTCATTACCGATTACATCAACTCACATAAGATAATATTTGTTATATGCTTGTTTGCGCGTATCTGATTGTTGTAGGCTGTAATATTGTTGTTTGATTAGACACCGGATGGGTAAAAATGAACTACCAAAATGATGATATAAGAATAAAAGAGATTAATGAGCTATTACCTCCGGTTGCGTTACTGGAGAAGTTCCCTGCTACGGAAAAGGCTGCTTTAACTGTCGCTGCTTCCCGTGAGGCGATTCATAATATTCTGGCTGGTGAAGACGATCGTCTGCTGGTGGTAATTGGACCTTGCTCTATTCATGATATTGACGCTGCGCTTGAGTATTCTCGTCGTCTGGCAGAAGTACGTAAACGTCTTGATAAAGATCTAGAAATCGTTATGCGGGTTTATTTTGAAAAACCGCGTACAACGGTGGGCTGGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCTCCGCGCTAGCGGAGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.40,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //