Array 1 1147223-1150030 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021642.1 Campylobacter concisus strain P2CDO4 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1147223 30 100.0 37 .............................. TTTTGTTTAGATCGCTATTTTCGGAGCAGGCATACAA 1147290 30 100.0 36 .............................. GCTTTTTTGGCAAAGGCGCAGAGATCGCCAACCAAA 1147356 30 100.0 38 .............................. ATATTGCAAGCGATAAGCCAAATTTTGGCGATACAAAA 1147424 30 100.0 37 .............................. ATGTAGAAAATTTGGGTCTTTAATGTAGAAAATTTGA 1147491 30 100.0 35 .............................. TTAGTATATTGACTAACTCTTTCCTGACGATTTGA 1147556 30 100.0 36 .............................. TCATCATAAAACATTGCTTTGCAGCCGTTTTTCCAA 1147622 30 100.0 36 .............................. CTCCCACGAATGGCGGTAACGGAATAGGAGCTGCAA 1147688 30 100.0 37 .............................. GGCGAAGGGGGGCTTTTATGACCCAGCTGGCTCATTA 1147755 30 100.0 36 .............................. TAAATTTAGTCCCTGCCCTACTTTCATCTCCAGATA 1147821 30 100.0 37 .............................. GCTGATCGACTGTTAATAGATTTTCTCTCATTTTATA 1147888 30 100.0 38 .............................. AAGACGTCACTCGCTCACAAAGAGTAAGGATAAGTGAA 1147956 30 100.0 37 .............................. TATAGTAGGCTAAATCGCCGTGATTGAGTGGCTTAAA 1148023 30 100.0 37 .............................. AAATACATTCTAAAAGGTGGTCTTGTAAGAAGTTCAA 1148090 30 100.0 39 .............................. CACTATAAAATAAACAATTGTCGTAAGTTTGAAATCCTA 1148159 30 100.0 36 .............................. CCAGTAATAGTATATTCAATAACACTAGGCTCATTA 1148225 30 100.0 36 .............................. CACCTTTGTACACACTTATATTATATTTAGCCAAGA 1148291 30 100.0 38 .............................. AAAGTAATATTTCGATATTCTAAGGCAGATAAACTACT 1148359 30 100.0 37 .............................. CTAAAATGGCTGAAACTACACATAAACCTAGCTATAT 1148426 30 100.0 35 .............................. TAGAAAACTAAATGGCAGGATTGATCTAATATCTC 1148491 30 100.0 36 .............................. TTTTATGAAGCCCTTAACTCTGCGAGCAATCATAAA 1148557 30 100.0 34 .............................. ATTCTAATTTTTGGTCTGCTCCAAAAAATTCAAA 1148621 30 100.0 37 .............................. ATTTCAGCAGTAGAAACAGCAGTGAGAAAAGCGACAA 1148688 30 100.0 37 .............................. CTAATGATGATATAGCTATCTGTATTTGTGCTGGATA 1148755 30 100.0 36 .............................. GAGAAACTGGCAAGATTGATTCTACTATTTCAACTT 1148821 30 100.0 36 .............................. ATGCCCTCTTGATCGACAATGCCAAACGCCATCGCC 1148887 30 100.0 38 .............................. GAGGCAGTCACTTGTGAGATTTTGCCAAACAAAAAGGC 1148955 30 100.0 36 .............................. ACCGCTAAGGGGCGAGGACTAAAGCCAGTTAAAAAG 1149021 30 100.0 34 .............................. CATGTTTCCAAATTAGAAACAACTACTGCATTGC 1149085 30 100.0 34 .............................. CAGTTTCCATCTTGTCTTTTGCCAGCATAACCGA 1149149 30 100.0 35 .............................. TATAGTTGTTTCTTATGTTTTGTTTTTTGCTTTAG 1149214 30 100.0 37 .............................. ACATTTATGGGGTGGTAGTATATGCCTGCGCTTGTAG 1149281 30 100.0 34 .............................. ATTTGACAAGAGCCACCATTTGGCGGACTTCGTC 1149345 30 100.0 34 .............................. GCTTTGAGATCATTATGTTTTCTTTGAAATATCT 1149409 30 100.0 35 .............................. ACGGCTTTCAAACTTCAATTAATAATCCTAGTGGT 1149474 30 100.0 35 .............................. ACGGCTTTCAAACTTCAATTAATAATCCTAGTGGT 1149539 30 100.0 37 .............................. AAAATGGTTTTAAAAACTGGTTAAGCAATATCATAAA 1149606 30 100.0 36 .............................. TCTGCTAATTCTTGCCTAGTCATTTTTAATACTTTT 1149672 30 100.0 37 .............................. CAAAACTAAGAATACCATCATCTTTTAAGTGCCTTAG 1149739 30 100.0 34 .............................. GTTCGTCTTGTAAAGGCAAAAGTGAAGCAAGCGC 1149803 30 100.0 38 .............................. GAGCTAATAAGCGAGCTAAGAAGAATAAGGGCAAGCAT 1149871 30 96.7 34 .........................T.... TTTCGGCAATATCGCTGAAAGTAGCCGAATTTTC 1149935 30 100.0 36 .............................. AACTGGTGAAGTTGGCCTATAAGCTCTCCACTTCCG 1150001 30 96.7 0 .............................T | ========== ====== ====== ====== ============================== ======================================= ================== 43 30 99.8 36 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : GCTAGATCCTCGCATTGGCTTTTTGCACGAGCCAAACTACCGCGCGCTAAGCCTTCACCTCGACCTTGCGGAGATTTTTAAGCCGATCTTGGGCGACACGCTGATTTTTAACATGCTAAATAAAAAAGAGATCACCGCAAAAGACTTCCAAACGGACGCTGGCAGGATAAAATTTAGCAACGACGCCGTGCAAAAGATCGAGCTAAAGATGATCTCGCGCCTTTGCGAGACGCTCACGGTGGGCGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAGCAAATAAGCTTAAAAAGTGTATCTGCGAGGACGCGCCTTATGAAGGCTTTAGGTGGGAGTGAAATCGCATTTTAATAAAGCGTTTTTTAAGATTTTAAAATGCTTGAAATTTAGGGCTTGGCGTATTTGTACATGACTAAATTTTAGTCAAATTTAAGGCGAAAAAATATAGACTTCTTGCACTAGAACACCTATAAAATCAGCTTTTTGGTGCTA # Right flank : TCCACCAAACATGGTTGGCGACAACCGCAATCACTCTTTTGATAGTCGTTTTTTTGGGGCAGTTCCATATAAATTTTTAGTTGGCAAAGTTAGATGGCAGCTGTTTTGACACAATTCAGAAAAACGCCTTGACCAAATATTAAAATAAAATAAATTATCGGATCAATGAAATTTAAAGAAGGTTATAATACTTTTTGTCAATTATAATTAAAACAAAAAATATATGAATTTATAAAACCCACTTGTAAAGACAAGCAGGTTTTAAAATGTTTTATTTCTCTAGTTTTTCTTTAAGTTTTTCTTTTTTAGATTTAGCTTTTGAAGCAGCTTTTTCTTTCTTTTCTTTTACTTTGTCAACAACTTTGTCTTTTTCATCTTTTGCTTTTTCACCCATACTAGTTTCATCTTCTTTGCTAGAAGTTAGCTCTTCTTTAGTTTTAGAAGCCTTCTTTTTAAATTTATCTTTTTTATCAGAGATTTTATCTTTCATCTCGTCTTTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //