Array 1 103461-101420 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVEQ01000004.1 Faecalibacterium prausnitzii strain AF36-11AT AF36-11AT.Scaf4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 103460 28 100.0 33 ............................ CAGATGGCCGCCGCCCTGGAAATTCCGAGCGAA 103399 28 100.0 33 ............................ CGTGGTGAACGCTATCATCCGAACGCTGAACAA 103338 28 100.0 33 ............................ CCAGCGAGGATGCCTCATACTCCATCGTGACAT 103277 28 100.0 33 ............................ CGACCATGGGGAGGTAAAAGACATGGAAATCAA 103216 28 100.0 33 ............................ TGTTTACATTTGCAAGCCCCGAAACAGCCTTTT 103155 28 100.0 33 ............................ TTGCTTCCGGCTCTCCACCTTCGCCTGCTTCCA 103094 28 100.0 33 ............................ TTGCTTCCGGCTCTCCACCTTCGCCTGCTTCCA 103033 28 100.0 33 ............................ CATTCACCGTGAAAAATATCCCCGGCCCCCAGC 102972 28 100.0 33 ............................ CGGTCGATACACAAGAGCACTATCCTTTGAAGA 102911 28 100.0 33 ............................ CGGTCGATACACAAGAGCACTATCCTTTGAAGA 102850 28 100.0 33 ............................ CCGACATTGCCGCATTTATGAATCTGGGGAACC 102789 28 100.0 33 ............................ CAACTTGACTTTGTGCTTGCGCAGAGGTAACAT 102728 28 89.3 33 ............TGT............. CTATGTGGTCCTGTACCAGATGCTCTGCCTTAT 102667 28 92.9 33 ............TG.............. TAACTTCCATGATTTCATTCCTTTCATTCCTGA 102606 28 85.7 33 .C..........TGT............. TGTGCCCTTTGGTCAGTATAAGGTTAACGATAA 102545 28 89.3 33 ............TGT............. CGCAATGCTCCGCACCGCGATCTGCCCGGTCCC 102484 28 92.9 33 ............T.T............. CAAGATCGCCGCCGACCGCAAGGCCCGGCAGGC 102423 28 100.0 33 ............................ CATGAGGGACGGAAGCTTGATTTGCATTGGCAA 102362 28 96.4 33 ..............T............. CTTGCGGTACACGCTCTGGAGCTTCGAGGTGGG 102301 28 100.0 33 ............................ CTGTAACATGGATATTTTCTTCTTCTTCGTACC 102240 28 100.0 33 ............................ CGACAGTATCACCAGCTTCGACGGCAAGGAGGC 102179 28 96.4 33 ..............T............. TACCCCGCAGGGACAGCCAGAAGCATGTGAAGA 102118 28 100.0 33 ............................ TATCACCGAAATCGCAACCGCCATTCTTCCCAG 102057 28 92.9 33 ............TG.............. TGCCATCGACCAGTCCCCCAAAAAGTACATCAA 101996 28 85.7 33 ...........TTGT............. TTTCACGGATTTGATGACCCACCGATAGCTGCC 101935 28 96.4 33 ............T............... CAGGGTGTACCAGTCATTGCCGGTCGGGTCAAC 101874 28 100.0 33 ............................ TATCCCCGCCGAGCAGCAGGCCGCAGCCATGGG 101813 28 100.0 33 ............................ TGAATCGGAACTGCCGCCGTAAAACAGAAAAGG 101752 28 96.4 33 ..............T............. GAAGGGGGATTATAGGGGGTTACTGGGGAGAGC 101691 28 89.3 33 ............TGT............. CCACTACCGGAACCAGCTGCTGACCGAATGGCT 101630 28 92.9 33 ............TG.............. CTACGAGCGTGTCCGCGACGGCGACATCGACCC 101569 28 92.9 33 ............T.T............. CTTCCGCGGCTATAAGCTGAACCTCATTTCCGT 101508 28 100.0 33 ............................ TCGCTTCCGCCTCGTGTGTCTTCATGCTCTACC 101447 28 85.7 0 ............T..........TC.A. | ========== ====== ====== ====== ============================ ================================= ================== 34 28 96.3 33 CTTTTCCCCGCCCACGCGGGGGTGATCC # Left flank : GCCGCCTCAGATGCCATTGTGGAATACGGCGCTCTCCGTGTGCGGGATGGTCAGCCTGCCGAAGAATTTTCGGCCCTTGTCCGGGGCACAGAACCTCTGCCGGATGTGGTGACAAAGCTCACCGGCATCACGCCGGAGGAGCGGAGCGGCGGTATGGAGCCGCTGGCCGCGCTGGAGGCGTTCCTCGCATTCGTGGGCAAAGATACGCTGGTGGGCTATCACCTGAAATTTGACCTCGATTTCTTGCGTGCGGCCTGCATTCGGAATGACAGACCCCTGCTTACCAACCGCAGCATCGATGTTTTGCCCCTTGCCCGCCGTAAGGTATTGGGGGTGATGAACTATAAGCTGCTCACGCTGGCCCGGCATTTTGAGGTTGTCCAGCAGGAGACCCATCGCGCCCTGCCCGACTGCCGCCTGATCCAGCAGGTCTATGCAAAACTGAATGAAACGGGATCGGCCCGCTGATAAAAATGCCGCTTCTATGGGATCTTTTTAGT # Right flank : ATTGACAACCCTGCGCAAAAAGCAGATAATAGGTTTATCTTGAATGCAGAGCGAGGGAAAGTATATGCTGTATTTTGAAAACGATTACTGCGAGGGTGCACATCCGGCGATCTTACAGAAGCTGGTGGAGACCAACTTTGAAAAGGTCTCCGGCTACGGCACCGATCCCTATTGCGCCAGTGCGCGGGAGAAGATCCGCGCGGCGTGCGGCGCACCGGATGCCGATGTCTGGTTCATTTCGGGCGGTACCCAGAGCAACGCCATCGTCATTGCATCGATGCTGCGCCGCTGGGAGGGTGTGCTGGCCGCATCCACCGGCCATGTGGCCGCTCACGAGGCCGGCGCCATCGAGTTCACGGGCCACAAGGTCATCGGCCTGCCGCACACCAACGGCAAGCTGGATGCCGGGACGGTTGAGGACTGGTGCAGGACCTTCTATGCCGATGGCAATGTGGACCACCTCGTGTTCCCGGGCATGGTGTACATCTCCCACCCGTCGG # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.89, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCCCCGCCCACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [19-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //