Array 1 241-1471 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMEV01000016.1 Halomonas alkaliantarctica strain 22509_21_Filter NODE_16_length_32469_cov_73.0912, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 241 32 100.0 36 ................................ AAAAGCGACAACTACGAAGACGCGGCCGCTTACTGC 309 32 100.0 34 ................................ GCGCCACTTGTAACTGGTCTGCCAAGTGTTGGGC 375 32 100.0 35 ................................ ATCCAGCACTGCCGGTTCCCAGCCGCCTTCTCCAG 442 32 100.0 35 ................................ TAATCTATGGCCGCATACCCCAACGTCAACGCGGC 509 32 100.0 34 ................................ GTCCTCATCGAGTACGGCGTATAGCCAGCGGTTG 575 32 100.0 34 ................................ CTCGTCGAGCCACACTACGTCCTGCTCAGTGCCT 641 32 100.0 35 ................................ CCGCCTGCTGCGTGCCGATGCCGACCAAGCGGGGC 708 32 100.0 35 ................................ TTCAAGTTTGTGGCTGGCATTTGCGAGTACATCGC 775 32 100.0 35 ................................ ATCACGTCGCCGATGTTTACGTGCGGGTCAACCTG 842 32 100.0 36 ................................ CAATCCTCCATGTTGAAGAACCCCTCTTTAGAGGAG 910 32 100.0 34 ................................ CTTTAGATCGTCGCGGTGCCATCGATACAACACG 976 32 100.0 34 ................................ ACCACCGCGAGATCAGCATGGAGTTTGCGACGCG 1042 32 100.0 33 ................................ ATTGATCGCCTACTGATGCTCCTTCGTAGGCTG 1107 32 100.0 35 ................................ CAGGGTGCCGCTGGTGGTGCGCCCCAGCACGAAGT 1174 32 100.0 34 ................................ CAATTAGTTTGGTGCGAATTATTTGCGAGCTGGT 1240 32 100.0 34 ................................ CAATTAGTTTGGTGCGAATTATTTGCGAGCTGGT 1306 32 100.0 34 ................................ ACGTCCGCCAAGTCGAGCAGCACAGGCTTATCAA 1372 32 100.0 36 ................................ ATATCGCCTAGCGCAGTCGTGATGAAGTTCCAGCGC 1440 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 19 32 100.0 35 GTCGCGCCCCACGCGGGCGCGTGGATTGAAAC # Left flank : GTCGTCAACTCCGCCTCCACGGCCTTAGCGATTAAGTCTCGGGCTCCCTGGCGTAGCAGTTCATGCAGCGGGTCAGTGATGTCGTTGTCTGGCTGCGTTACGGCTTGGAGGGTAGAATCGGTCATGGCGTATCCATTGGTGTTGGTTGAGATCTTGGTCGTGATCAATCAACAGGATACGCCACCTTTCCTACTTCCTCCCATACACCAGAATCGAGCTTAACTCAATAATCGCTCGCGCG # Right flank : CGATTTTGTGATTTGCGACCGGCGCGGAAGGGAAGGTCGCGCCACGCGCGATAACTAGCGGTGCCGTGTTTTTGAACGCTTATCTTTAACGAGGACATACGCATAAAGGGGTGAAATGAGTGCCACACCCAGCCAGAGCACAAGCACAAATCCAACCAGCCAAGCAATCATCGTCAGAAGCAAATCAACCATAGGAAAGCCAAGACGTCACTCCTCCAGCGACAAACCGAGGTTACTGATACCGTCATTGCGGCCGAGCTGACGGATGGCCTTAAGGGCGTTTTTATCCAGCGGCTCGGAGACGGCCTCCAATACGGCGTCCTGGAAGTTGTTTTCGTCCTCGGTGAGCGGGTGGTCGCGAATCAACAGCGCGAGTTTCTGCGCGTCCTCCTCGCCTTCGGTGAGTTCGATAAAGGCGCGCACGCCGGCGCGCGAGGTGCGGCTAACATCCAGCACCGCCTCGGGCGCCTCCCCCTGCAGCGTATCCAAAATCGATGACA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.80,-10.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [50.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 50430-51524 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMEV01000015.1 Halomonas alkaliantarctica strain 22509_21_Filter NODE_15_length_51680_cov_54.1832, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 50430 32 100.0 35 ................................ AAGGATGGCGAGCGTATCCGTATCAACGGTGTCAA 50497 32 100.0 34 ................................ AGCATTATCTGGCGTGACAGCATCGCCATCCTCG 50563 32 100.0 35 ................................ CGCAGTAGCGGGCTTGCAGTACCAGGGGCGTTGCC 50630 32 100.0 34 ................................ AAAGTGTTTTGCAGCGGGCAAGAGATCGGCACGG 50696 32 100.0 34 ................................ GCCTGAAGCGGCGCGCGTTGCGGCATCAAAAGAG 50762 32 100.0 35 ................................ CGCCGCGACCCTGAGATTATCCTGCCGTCTGCCAT 50829 32 100.0 35 ................................ GCATGAAGCGCCGCAACAAGAAGTAACCTACCGGG 50896 32 100.0 35 ................................ AACGGTCGACGCCATCGGCGTGGCCGCATTCGCCG 50963 32 100.0 35 ................................ GCTCGCACGGCCTCTGTCACCGGCCTCGTGTCGTC 51030 32 100.0 35 ................................ ATGGGTAGTGCTCCTTATGCGAAGGGATGGGCCAA 51097 32 100.0 33 ................................ CCTGAGATCAGCTATGCCATCGACTGGATGGCC 51162 32 100.0 34 ................................ ACCTAACTAATACCAGCCCAACGAGCACTCCCCG 51228 32 100.0 36 ................................ TGGTACGCCTCGCCCTTGGCGTTGTCGCGTTTGCGT 51296 32 100.0 34 ................................ ATTTCTGGGGCCTTAACGCCGCCATTAAGGGCGG 51362 32 100.0 33 ................................ GCCACCAAGGCGACGTAGACGCGCTGGCGCCGC 51427 32 100.0 34 ................................ AATCTGGCCGGTATTCGGCAAGCTACTAAAAGGT 51493 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 17 32 100.0 34 GTCGCGCCCCACGCGGGCGCGTGGATTGAAAC # Left flank : CTGCGTATTACGATAGGAATCATACACCCATGATGGTCTTGGTCACTTACGATATTTCCCTTGAAGACCCCGATGGCCCTGGTCGCTTGAGGCGAGTAGCGAAGGTCTGTCTCGATTACGGCGTTCGAGTTCAATACTCTGTTTTTGAGTGTGAAGTGGAACCTGCTCAATGGGTTATTTTCAGAGACCAGTTGCTCAGCATTTATGACGAAAAACAGGACAGCCTGCGATTTTATAAACTGGGTAAAAATTGGAAAAACCGAATCGAACACCACGGGGCAAAACCGGCCCCGGATATATTCCGAGACTCAATGATTGTATAAACGCTAACCGTGAGTGCTCATTAAAAATGCGGGATGTTAGCGAAAAGCTGGAGCCCTTGGGTGGCCCGGCTTTTTCGTTTTTGGCTATCACGATGGTAGCCAGTGATTGGGTAAATCAGTGAGGTTAGCGATGGCAAGGGAATGGCCGTTTCTAATTCAATTAGTTACGATGGAGCA # Right flank : TGTAAACGTGACCCCATCCCAATAATCGCGAGTTATGGTCAAGTCTGGTGTACAGCGGTCAAGCGGCGTTGCTGTCTGATTGATCGGTTAAAGGCTCACCATCCTGGAACTTCACGTTATTCACGACGAGTTCCAGTTTGTTGAACCCGGCTATAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.80,-10.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //