Array 1 24731-24282 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWNZ020000006.1 Escherichia sp. 11.1596 MOD1-EC7064_6_length_165087_cov_71.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 24730 28 100.0 32 ............................ AGTCGAACCGCGTTTTGTATTTGAACGGTACT 24670 28 100.0 32 ............................ ATCGCAAGACGACTTGCGCACCTGGCTGGAAA 24610 28 100.0 32 ............................ TGGGCGCGGGAATATAACACCCAAAATAAACC 24550 28 100.0 33 ............................ AATCAGCCCCCCGAGCGCCGGTGATAGCGTCGC 24489 28 100.0 32 ............................ GCAGGTAAATATAGCCGGGCATTACTACTGGA 24429 28 100.0 32 ............................ GATTAACATTCCCACAGCCTCGCCAAGGGCGA 24369 28 100.0 32 ............................ TGTTTGAGAACCTTCGCCGCATGGGGCATCAG 24309 28 89.3 0 ....................T..TT... | ========== ====== ====== ====== ============================ ================================= ================== 8 28 98.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGTGTTTTTTATTTAAGGCGCATTAATGCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAAGATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTTTTGCTGCCTTACTACATGGGGGCAACGGGGCGCTACTATAGGGAGTTGGAGCAAAACGGTCAAGAAGAATTTATTTAGATTGATTTGTTTGGTTACGCAATGAACACACGATTCATTCGCCCGAGATTATGGCCGTATGCGTTCTGGTCAATTGTTTATCAAAAGCTACGAGGGAAATATGAGAGTGAAGAAATACCAATCGCCCCATTTTTTTAGAGTGACATGTAACTCATTGATTTTGTTTATTACTATCTTGACGTCTCGAAAAAGGGTATGAACCTATGATTTTGTGATTTTTAACAGTAAATCAATCGGATAGTCTGCTATTATTTCA # Right flank : ATCCATACCCAATATTTATTTTCTTCCTTAATCCCGGGCGCAAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCGTCAGGCGGCAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAGGATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGTGCAGTAACCACGTGACCGTTTTCTAACTCTACGCGGAACATGGTGTTAGGTAACGTTTCAAGAACAGTACCTTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCGTAATTTGAACCGGCAAGATAATGCCGAAGTTCTGTAAATAAGTAAAGATTTGCGCGCTAAATCGCAACAAACAGGTTTGGCACATAACTCCGAAAATACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAACGGTGAGATAAAC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 40877-38985 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWNZ020000006.1 Escherichia sp. 11.1596 MOD1-EC7064_6_length_165087_cov_71.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 40876 28 100.0 32 ............................ ATCAATGATGGCGTGTCGAGCGTCTACATTCT 40816 28 100.0 32 ............................ CCAGCGCGGTAAACGCCTGCGACATTGATTCA 40756 28 100.0 32 ............................ TGATCATGGCTCGGGAATAATCGAGTACACCC 40696 28 100.0 33 ............................ TGGAGCCAGCGTTTTACCGTCCTGGCAGACGGT 40635 28 100.0 32 ............................ AGTTCGCGAGCTGCGCTTTGATGTCAGGCCAT 40575 28 100.0 32 ............................ TGCCATTTTTCGTGCATCCTCCAGTTCAGTTA 40515 28 100.0 33 ............................ TGGACTATCAGCGCCCGGTTGCCGGAGAGTGAA 40454 28 100.0 32 ............................ AAAAACAGGTGTCAGCATACGTGAGTATTTTT 40394 28 100.0 32 ............................ ATTGAAGCACCGCCGCCCCGCCGCCCGTTCAG 40334 28 100.0 32 ............................ AGCAGGCGTCCATTCTGGAATTTGCAATCTGG 40274 28 100.0 32 ............................ GTTCCGACAGTGAAACCGTCCTCGCCATCGAG 40214 28 100.0 32 ............................ TGCCCGAGACTCCCAACAGCATCATTAGTAAC 40154 28 100.0 32 ............................ TGGCCGACGCATCCGCTAACCGCCGACGAGAT 40094 28 100.0 32 ............................ GCCAGTGTATCCGCCGCCGGTGTGTCGTGATT 40034 28 100.0 32 ............................ GTCCGCGCTGGTAGTCCTGAATAATGGTTTTA 39974 28 100.0 32 ............................ CGTAGGGACGCCGTAACCGCCGATTACATAGT 39914 28 100.0 32 ............................ AAAAGTGAAACGCAATTAATTGAGCGCGACAC 39854 28 100.0 32 ............................ GCACTTATGGCGAGTAACAAAGGTTGAAATGT 39794 28 100.0 32 ............................ GTGTGTTCGTTATCGCAAGTGCTAGAGACGAT 39734 28 100.0 32 ............................ ATGCTGTTGCCGATCGCTTTGTAACGCGGCCC 39674 28 100.0 32 ............................ GAACCGGCGCAGCGTGGCTGCTGGCAGCAAAG 39614 28 100.0 32 ............................ GCGCTGGTTGCCGTGGGCTGAAAAGTATCTGG 39554 28 100.0 33 ............................ TGCACAACACCGCGCCCTCCGCACCGGCACGCA 39493 28 100.0 32 ............................ GGCACGGTGCCTTTTCGTAATGTCGAATTTTT 39433 28 100.0 32 ............................ ATATCCGGGCGGATCTTAATTTGTCCGCTCTG 39373 28 100.0 32 ............................ TGGCCGACGCATCCGCTAACCGCCGACGAGAT 39313 28 100.0 32 ............................ GCCAGTGTATCCGCCGCCGGTGTGTCGTGATT 39253 28 100.0 32 ............................ GTCCGCGCTGGTAGTCCTGAATAATGGTTTTA 39193 28 100.0 32 ............................ CGTAGGGACGCCGTAACCGCCGATTACATAGT 39133 28 100.0 32 ............................ AAAAGTGAAACGCAATTAATTGAGCGCGACAC 39073 28 100.0 32 ............................ GCACTTATGGCGAGTAACAAAGGTTGAAATGT 39013 28 92.9 0 ....................T...C... | C [38990] ========== ====== ====== ====== ============================ ================================= ================== 32 28 99.8 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AGTTGCAGGTTCAACTGGATCAGAAAGGTGTTTCTCTGGAAGTGAGCCAGGAAGCACGTAACTGGCTGGCTGAGAAAGGTTACGACCGGGCAATGGGCGCACGTCCGATGGCTCGCGTCATCCAGGACAACCTGAAGAAACCGCTCGCTAACGAACTGCTGTTTGGCTCGCTGGTGGATGGCGGTCAGGTCACTGTTGCGCTGGATAAAGAGAAAAATGAGCTGACCTACGGGTTCCAGAGTGCACAAAAGCACAAAGCGGAAGCAGCGCATTAATCTGGGGTCGTGAAGCCTTTTAAGTAGGTTGATAAAGTCCGTAATCTCGTAAGAGGTTACGGATTTTTTTGTTTGTGAGGTGGGGCGGTAAAAAACCTATTTTTGAGGGCGAAGGTAAGTTATTGATAATTAATGCTTGCTGGAAGGCAAGGATAAAAAAGGGGCTGGACAAGGAATTTTGCTGGTTTCGCTTTATTAACAATGGGCTAAGCGTGTAGTATTTGA # Right flank : TACGATGATGGCAGAAATTTAGCTGCGTTATGGCGCTCTCAACTCCGAACCATTAGCTGTGACACACAATAACAATTGTGATAATTGCGACGAGAATCAATTTCTCACACAGAAATCAATGCTGTACTAATCCTAACTCCTTCAAATAAAAATAATCACAGGATGTGTTTATGTCTTCAAATTACCTTACTCCTTCTGATCTCAAAACCATTCTCCACTCCAGGCGTGCCAATATTTATTATCTGGAAAAATGCCGGGTGCAGGTGAATGGTGGGCGAGTGGAGTATGTCACCAGTGAAGGCAAGGGGTCGTATTACTGGAATATCCCCATTGCGAATACCACGGCGTTGATGTTGGGGATGGGAACGTCCGTTACCCAGGCGGCGATGCGTGAATTTGCCCATGCTGGAGTGATGGTGGGTTTTTGTGGTACGGATGGCACGCCGCTGTATTCGGCAAATGAAGTTGATGTTGATGTCTCCTGGCTCAGTCCGCAAAGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //