Array 1 420888-421460 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN869528.1 Intestinimonas massiliensis strain GD2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 420888 33 100.0 35 ................................. AAATGCATCCTTTATGCCCACAGTGAAGAGCGCAA 420956 33 100.0 34 ................................. AATGTCGTGGACCAGGGGGGAGCCGCGCAGCTCT 421023 33 100.0 35 ................................. CCGACGTACTTAATGAGGATGCACTGTGTGTTGCC 421091 33 100.0 34 ................................. CTCCTGGCCCAATCATATCACCCCCGGTAAGCAT 421158 33 100.0 34 ................................. TGGCGCTCGGCGGCCAGCTCCGCCTCAAGCTGCC 421225 33 100.0 34 ................................. GGTTATATGGACAAATCATTTGTCTCGCCTCCTA 421292 33 97.0 35 ...........................C..... CCTGCATTGCCAAGTTGCTTCTTGGCGATATTGTA 421360 33 100.0 34 ................................. CGCAGAAGCAGGAGATTACCCAGGAGTGGCAGGA 421427 33 84.8 0 .........................C.A..GCA | G [421450] ========== ====== ====== ====== ================================= =================================== ================== 9 33 98.0 34 GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Left flank : TATCCGCCGTTTCTGTGGAAGTGAGGCGGTCCTTTTGCTGGTAGTCATCACCTATGACGTCAACACCGGGGATGCCGCCGGGCGCAGGCGGCTGCGGCAGATCGCCAGGCAGTGCGTCAACTACGGCCAAAGGGTGCAAAACTCGGTCTTTGAATGCCTCCTGGATGGGGCCCAGTGCCGGCTGCTACAGGCCAAGCTGCTGGCACTTATGGACTCTGAAAAGGGCAGTCTGCGCTTTTATTATCTGGGCAACAAGTATCAAACCAGGATCGAGCACTTCGGCGCCAAGCAGAGCTACGAACCCGAAGGCGTCCTGATGATCTGATCCGGTGCGAGGGGCCGGTGGGTTGAAAAAAACGGCATAGTTCGCACCAGACCGGTGCCATTTCTCGTGTCATCCAATCCTATTTGCATGGGTTCTTATGGAGTTTGACCCTCGGTATTTTTCTTCTTTTAGGAAATTTATAAAAAATTTTAAGAAGTTTTTATGCAGTTTTGCT # Right flank : AGCGGGAAGCGGGACGGCCACAGGCTGTCCCGCTTCCCACCTTTTACTCCGCTTACTCCGCCGCAACCGGGGTGGAGGTCTCGCTCTCCCGCTTTCTGCGGTGGAATATATGGCTGATATTGTCAATGACTGAATAATACACCGGGGTAAACAGCAGGGTGATAACGGTCGAAACCACCATGCCGCTGATCATAGTGACACCCATATCCGCCATCATCTCAGCCGCGCCGCTCATACCCAGAGCCATGGGAACCACGGCCAGGATGGTGGTGAGTGTCGTCATCATCACAGGACGAATCCGCAGGGGACAGGCGTTGAGGATGGCTTCCTCGCGGCTCTCGCCCCGGGCCCGCCGGGTTTGGATGTAGTCCACCAGGATGATGGAGGCGTTGACCACGGTGCCGGCCAGCATAATGAGCGCCACCAGGGAAATCATCGACAGGTCCCGTCCGGTGAGCGGCAGGGCAAACAGGGCTCCCGCAAAGGCCACCGGCAGGATC # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.20,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 916934-914353 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN869529.1 Intestinimonas massiliensis strain GD2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 916933 31 100.0 36 ............................... TGCAAATCATGAACGAAAAGGATGTGCGCATCCCGT 916866 31 100.0 34 ............................... CTGTATCATCGGGGGGCTTATCGGATGGTTTGGT 916801 31 100.0 37 ............................... ACCATTACGGACAACCGGACCATACCAGAGCAGCGGT 916733 31 100.0 37 ............................... CGGGGGCACGGCGGGGCAGATATTAAGCAAGACTGGT 916665 31 100.0 36 ............................... TACCGAGCTCGCGTTAGACCTCTCCGCCCTCCGCGT 916598 31 100.0 36 ............................... AGGACCTTGCCGTTGTCGGAGGCGGTGACGGAGGGT 916531 31 100.0 36 ............................... AAAAGCCATGGGTGCCCAACTCAGATGAATGGGTGT 916464 31 100.0 36 ............................... CGACTCCTTGTCGATGATATAGGAGTCCTCAAACGT 916397 31 100.0 36 ............................... TCCATGGCCGGAACAATCCCTCCGCCGCAGTCGGGT 916330 31 100.0 38 ............................... GGATATACTCCATTGCTTTTCCCTCCTATATCTGGTGT 916261 31 100.0 38 ............................... AGCATCCGATCGGTGATGGCCGTGGCCAGTGTCGTTGT 916192 31 100.0 35 ............................... GGATACGTGGCCATCTGCAAGGACCCACAGCTCGT 916126 31 100.0 37 ............................... TCGGCCCGCCGCTCCTGCCCGGAGCATCAGACTGCGT 916058 31 100.0 36 ............................... ATAGTACAATGGTAACACCTCCGATAGAGTAAAAGT 915991 31 100.0 36 ............................... CGATAGGCTGGGCGGGGACGCCATGGATGCTAAGGT 915924 31 100.0 36 ............................... GCTCAGGGAGGAAGGGGGAGAGGGAAGGGGGGTAGT 915857 31 100.0 37 ............................... GTCTTTTCTGGCAGCGTACCTGCTATGGCAATCCCGT 915789 31 100.0 35 ............................... TGTTTGCATCGGAGAACGATGCGCGGTACCGGGGT 915723 31 100.0 36 ............................... AAGAAGTACCTGGACCTGGGGCGGAAGGGGGACGGT 915656 31 100.0 36 ............................... GCCGCGTCCCATAAATACCCGCTGCTTGGGCTGCGT 915589 31 100.0 35 ............................... GTGCAGTGGAGCGCGGAGGGGAATACGCCCTGTGT 915523 31 100.0 36 ............................... GCGAGTTGCGTCCATCGAAGGCGATATGGCTTGCGT 915456 31 100.0 36 ............................... AATCCGCCCCGTCTCCACAGGCCGCTGGTAGGCCGT 915389 31 100.0 37 ............................... TCCCGGTTGGCCTCATAGTACTGCCGCTGGTACTCGT 915321 31 100.0 35 ............................... GTATTTGGAACGGCAATAATGCATGTGTGCTAAGT 915255 31 100.0 37 ............................... ATGCCGGCCTCTTCCGCCGCACCAGACCACATGGCGT 915187 31 100.0 36 ............................... CCTAATCGTGCCCATCACGCGGTATATCAGAGAGGT 915120 31 100.0 35 ............................... ACGGGAGACGCGGCGGCGGGGGAGGTCTGGCGGGT 915054 31 100.0 37 ............................... ATCCCGCATGAGTATCAAAGCTACTGCATCCGCCGGT 914986 31 100.0 36 ............................... GTCGTAGCCGCCGGAACGGGGAGCCCAGTTGACGGT 914919 31 100.0 35 ............................... TCCCACGATCCGGCGAGGGGCAAGGCCACTACCGT 914853 31 100.0 35 ............................... CTTAGCGGACATAGAGCGCATCGCCATCGTCACGT 914787 31 100.0 38 ............................... TTGATAAATTGATATGCGATACGCAGTTTCCTATCGGT 914718 31 100.0 37 ............................... CAGTAAGCGGGGTTAATGATGATACTGGCCCCGGCGT 914650 31 100.0 36 ............................... GTCGTAAAGCGAGTCCCAATTATCTGATATGTATGT 914583 31 100.0 36 ............................... AAGAAGGTTACCTTTTAGGCGGTAACTTGGTAACGT 914516 31 93.5 37 ...................T...G....... CGCTCAAGCGTCTGTGCCGCCGTCATCGCCTCTGAGT 914448 31 87.1 34 .......T....A......A...G....... AAACGTGATGCCGCCCTCAGAATGGTCAGACTGT 914383 31 74.2 0 ....................AC...GCCTTA | ========== ====== ====== ====== =============================== ====================================== ================== 39 31 98.8 36 CGCGCCCCGCAAGGGGCGCGTGGATTGAAAT # Left flank : GAGGACTATCCGCCGTTTTTGTGGAAATGAGGCGCCTATGCTGGTTTTGATCACCTACGATGTGAACACGAGCGACGCCGCCGGTCGCGGACGGCTGCGCAGGATCGCAAAACAGTGCGTCAACTACGGTCAGCGCGTACAGAACTCGGTGTTCGAGTGCCTGCTGGACACGGCGCAGTACCGGAAGCTGCAGAATGAGCTTTGTAAGATCATTGATCCGGAAAAAGACAGCCTGAGGTTTTACTACTTGGGAAAGAAGTACGAGAACAAGATCGAACACTTCGGCTGCAAGCAGACGTATCTGCCCGAGGAACCGATGATCTTATAGTGCGAAGCGCAAGCGCGCAGAAATTGCCCGGGCGGTTCGCACCCAAATCTGCAATGATTTTCTGAATGGAAAAGGGATTAGAATGCCCTGACAGGCGGCATTCTGCGCAAATTTGCTCAAAACTTGTCTGTTATCGCAAAAATGTGCAAAGCAATTTGTACACTTTTGCTGT # Right flank : TTAAGGGCATGGTCAAGCACATTTATAGTAGGAATGTAGTATATGAGAAAAGAGCAAGGCTGTTGGTAAATGAGCCAACAGCCTTGCTTTCATTTCATATGGTTAACAGCAATTTAACTCGTTTCTGCACCTGCTTCTCAATCATCCGCAGGCGCTTTTCAGGCAGATTATATCTGGAATGCTTCTTGAATTTGAATGTCAGAAGATGCCGCAGTTTTTCGTGCAGCTCCGGTGTCAGGACGCTTGCTGCTGTGCCGAGAAAATCATCGTACACGCTGGGGTACAGCGTTTTGATATATTCCTCCAGCGCGGCCTCGTCCGTCCATGCGTCCCCACCCGCAAAGTTAAAGAGGGAATTGCCGTGGTCAAACAGGGGAGCAGGGGAGACGATGGTATTCGTTCGATTACCGACCATCACGCCAAAGTTTCCAAAATGGCGGTCTACATTACAGATCACCGCGTCAAACACCAGCATTTCGTTCAGCGCATGGACAAACTCA # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCAAGGGGCGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.20,-11.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.15 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //