Array 1 145625-141236 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBQJ010000001.1 Intestinibacter bartlettii strain MSK.13.56 DAHONILI_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================================== ================== 145624 35 86.5 9 A.......................-..-..A.A.... ATCGATTAA A [145593] Deletion [145581] 145579 37 94.6 56 ..................C.....T............ TTTAAAAAAGTGTAACACTTGTAATAACAAAAATCAATATATGATATATGATTTAA 145486 37 94.6 37 ........AT........................... AATTAGGTTTATGTTTATCTTTCTTAGCTCAAGAAGG 145412 37 100.0 38 ..................................... ATGATTATAATACAACTAGAAATATGAAATTAAAATAC 145337 37 100.0 38 ..................................... AGTTCTTACACAACTTCCCCCACCCGCTCCTCTTATCC 145262 37 100.0 36 ..................................... CCATTTCCATCTTCCACAGTAAGATTTCTAGCATCT 145189 37 100.0 37 ..................................... AAGATGAAGACCAAAGAATTGTAAGAGAAAGTCTTCT 145115 37 100.0 36 ..................................... TCCTATTTCTTGTCCAGCTTCTTGACTTGCACTTCT 145042 37 100.0 36 ..................................... TTGTAAAATATTAGGGACAGATAATTACTTTAGAAT 144969 37 100.0 36 ..................................... TCAAATGTTATTTAGAAACTTGTCAAAACCTATTAT 144896 37 100.0 37 ..................................... AAAGTTGCAGTTTCACCTTGTCCTACATTACCTTTTT 144822 37 100.0 37 ..................................... TACTTGCATTGCCTCCAGCTTTACAACAACTTACTTT 144748 37 100.0 37 ..................................... TATTTCTAGAATGTTTATGGAATTCACTTTCGTCTTT 144674 37 100.0 36 ..................................... TTGAATGGGACACTATAGATGATGCAGTTGAGTATA 144601 37 100.0 37 ..................................... AGTTTGCTGGTAATGTTAGTGGAGTGTCACTTAAATT 144527 37 100.0 37 ..................................... TATATTCAATTTACATAAGTATAACATACTTGATATT 144453 37 100.0 37 ..................................... ATTAGTCGGTAAAAAGCCGAGTTATCGTCCATTGATC 144379 37 100.0 36 ..................................... CAGAAAAAAGTTTGTCGAAAAGCAAAAAATTATACA 144306 37 100.0 37 ..................................... AGTGTATCATACTGAACATAAGAATATTGACTTTTAA 144232 37 100.0 38 ..................................... GTAACAGTATATGCAAAACATATAAGTTTTGACTTAGC 144157 37 100.0 40 ..................................... TTTGCGAAGCCCAGTTAACTACGTTATTATATGCTTGTGA 144080 37 100.0 38 ..................................... AATTATCTCTAATCCTTTAGCTTCAATTTGTCTTTTTA 144005 37 100.0 37 ..................................... TCTTCAAAGATTGCCTTCATACAGACATTATTATTTT 143931 37 100.0 38 ..................................... ACATTTATTGTCTTTTAATGCACTGTCTAATGCATAAT 143856 37 100.0 37 ..................................... AAAAATGCAAGTTTAAGAGTGAATTATGCAATTGTAG 143782 37 100.0 36 ..................................... CTAATGCAGTGCTAATGGCTTTATCTAATGAAATGC 143709 37 100.0 39 ..................................... ATTATCTATTACTATATTCTTAATGTCTTTGTATTTTTT 143633 37 100.0 35 ..................................... TCAACTCTATCAAAGTCATCAGAAGGTTCAAGATT 143561 37 100.0 36 ..................................... AAAATGCTGGGAAGTTTATACCTATTCCAGATAAAC 143488 37 100.0 37 ..................................... AAAATTGATAATTTGTACAATACTTTATTTTCTTTTT 143414 37 100.0 37 ..................................... TCTTCATTATATGTAGTACCTAGAGGCATTTTTAATT 143340 37 100.0 36 ..................................... AGGACACAAGTCTGTGCCAAGAAAAAACCAATGTTT 143267 37 100.0 36 ..................................... TTCATCAAAACGAGGTGGAAGCGTTGTTCCAATTAA 143194 37 100.0 38 ..................................... AGTTTGTCTTAAATAGTCATATGTCATAGTATCTGGAT 143119 37 100.0 36 ..................................... TAAAAAACAAGATGGAACACTTATAGGAACTGGTGT 143046 37 100.0 39 ..................................... GGAGGTGTATTATGAGAGATTATGATATAGAGAGTGATT 142970 37 100.0 38 ..................................... GTTTTGAAGGAAGCTATATCAGCATTAATTTTTACATT 142895 37 100.0 37 ..................................... ACCTCTAGTTATGATTATTGCCCTGTATTGGATAACT 142821 37 100.0 36 ..................................... AAGTTCAAGGACGTTTATTGGAGCATATAAAAACTA 142748 37 100.0 36 ..................................... GGCGAAAATAACAAAAGACAAAGAAATATTAGTACA 142675 37 100.0 36 ..................................... ATATTGACGATAAACTTGAAAGACAGCTTGAAAGAA 142602 37 100.0 37 ..................................... AAAGCGATAGAGAAAACTACATAGAAGAAGGTATGAT 142528 37 100.0 37 ..................................... CCAAAAGAATTAGTAGAATCTGTAAAGGCAGTAGACT 142454 37 100.0 37 ..................................... ACAAGTAGCTCAAATTGATATGTTTTTCTGTATTTCT 142380 37 100.0 36 ..................................... ACTTTGCATTAATACCTCGTAAAGTCCATCTTCTGT 142307 37 100.0 37 ..................................... ATAAAGAAAAAAACAGTAAGTCGGTAGGTGAGTTTGC 142233 37 100.0 36 ..................................... AAAACAAGCTCAGGTAGAAGTTAATAGAATATTAGA 142160 37 100.0 37 ..................................... TCAAAACGAAAAATAATGCAATTATGCAATGCTGTAC 142086 37 100.0 38 ..................................... ATAGATAACGGTATATTAATGGCTAATACAGATGCTTA 142011 37 100.0 37 ..................................... TTAATGCACTTGCATATCTATTCCTACCATGTTCTCC 141937 37 100.0 39 ..................................... CTAATGACAAATCAGTTGGTTGGTTGTTCGCAATATCTT 141861 37 100.0 36 ..................................... TACTTTTTATAGTACTAGATTATATAGCAGGTTTAA 141788 37 100.0 36 ..................................... GTTTAATGAAAGAAAAAGAATATGACACAGTATGCA 141715 37 100.0 36 ..................................... ATGGATTAGAAACCTATTAGAGCAAGGTTATGAGGT 141642 37 100.0 36 ..................................... GTTAATTTTACTGACATTTTTACTGACATTTTAATT 141569 37 100.0 37 ..................................... CCACCAGCTGTAGCTTTGCCTATTACACTTTCTTTTG 141495 37 100.0 38 ..................................... GATGGGCAATAGTAGCAAATGATTACGGCTCAGGAGAG 141420 37 100.0 37 ..................................... GTCAGCATGCCTTTACACTGCTCACACAATGCTATCC 141346 37 100.0 37 ..................................... GTTATCCCACCTTTTCCAGCAGTTCCGCCACTCTTGT 141272 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================================== ================== 60 37 99.6 37 GTTTTAATCCTTGTTTTATTGGAACTTATTCTTTTAC # Left flank : TTTGTGATTATAATAAAATACGATTGATTTGCATCTTTTTGAACTTCCTCGATTATATTTACCCAAACTTCATCTAGATAACTTTTGTCTATTTCCATAAACTCTAAAGAACTTGCTAATTTTTTTTCTTTTATCTTTGCTGCATCTTTATCTTTATATTTTTCTATTTTTATTCCTGCCCCAACATGTCCATTTCCTTGTTGATAAATTAATGCATCTTTATAAACATCTTTGTAAAAACTTCTTAACTCCTTGGTGACTTTTCTTTCTCCTTCATCTATATTTATGAAGATCACATTATCCATCGGTTTCGTGTCTTTAGTCCATAATTCAACTAAATCCTTCTCACCATCTATAATTCTCACTTCATGACCTATATTTTTTATTTGCTCTATCAAATAATCACCTCCTGCAAAGGATATTAATAATTACATATATTAATAAAATCTTATATTTAGATAATAGTCCTATTGTTATTATATGTCAATAAATGTTTTTAA # Right flank : TCGTAACACCTAAACACATTGAAATAACTAGTTTGTAGCGATTATATAATTTTTAAACTTATTAAAAACCATCTTGTTTTTAAATAAAACAAGTCAATTTTTTGTTATCAACACCAACTCCAAATCAAGTTATATCAATGGATATATAGATTAGGATTATATTTTTTAAATAATTTTACAATAACAAACAAAATTATTAATCAAAAAAACTTTTGAAAATTTTTATATCTAATTATAGAGTATCATACTATTTATAAAAAATACACAGATTTTTTATAAATAGATTTAGCTAAATCATATTTTAATAAAGTATGTATATATATCAATAAATTTGAAAATAATTCAGCTAAGTAAGAGTCAAGAGTCCTTATTGTAAGTATCTATATTTTCCTTTTTTAATAAATAACTCAACGTACTCTTGCCTGGATTTTACCTAGCTGTATATCTTTTATGAAAATTTCAACCTTTATTTGTATTACATGCATTTTATTTCCCCCAAA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCCTTGTTTTATTGGAACTTATTCTTTTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.68%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [75.0-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 2 152193-156369 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBQJ010000001.1 Intestinibacter bartlettii strain MSK.13.56 DAHONILI_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 152193 37 100.0 38 ..................................... GGTAGCCTAGATTTAAGTTACCTCTTTCAGTACATATT 152268 37 100.0 36 ..................................... GTAATTTTAAAGAAGTTATAAGTAAGATAAAAAATT 152341 37 100.0 36 ..................................... GATATAATTGTATCTGCTGGTGGTAAGGCTATAGGT 152414 37 100.0 39 ..................................... ATTTCTACTTATAGTGGTGAAGTAGGAACTAACGTTGAA 152490 37 100.0 36 ..................................... ATAAAATCTTGTTGTGAACATTCTTCCATGCACGTT 152563 37 100.0 38 ..................................... ATGAAAATATGAATATTTTAGGTTTAAAAGGCGAAGAT 152638 37 100.0 36 ..................................... AATTGCGAATTAACTTCGTTGATAGCTCCTACTACT 152711 37 100.0 38 ..................................... TGCTTTGCCGAGTAACATTTCTTTTACAAATCGCTGTT 152786 37 100.0 38 ..................................... TTACAATGTTTATACAACAAATGAAACTAAACTATTCT 152861 37 100.0 37 ..................................... TTTGATTATAATTTTCTGAATAAGCAGCGTGTGCTTT 152935 37 100.0 37 ..................................... AATTAAAATGTCAGTAAAAATGTCAGTAAAATTAACT 153009 37 100.0 37 ..................................... AAAGAAGGAGATTTGATATTCTACGATAGAGATAAAG 153083 37 100.0 38 ..................................... CTTTTATCGTATTTCAGTCCCATAAATGTATACATTGA 153158 37 100.0 37 ..................................... TATAAGAAAGGAATTTTGCATGAATGATGAATGGTTA 153232 37 100.0 36 ..................................... GTATCTGTTTTATTTCTTCTATCGAATATATTTCTT 153305 37 100.0 38 ..................................... TTTGTAGCTAGACCTAAAAAATCATAGGAGGGATTATT 153380 37 100.0 40 ..................................... TATGTAATCTTCTCTATATAGATGATAAAGTTCAAATAAA 153457 37 100.0 36 ..................................... TCGCCAGTTTCTTTTTTAAAGTATTTACATTTCATC 153530 37 100.0 36 ..................................... GTTATCATCACCATATAAATCACTATCCGTTTCACT 153603 37 100.0 35 ..................................... ATAGTAGCGCAAAAGACAATAGACAATAAAAACAA 153675 37 100.0 37 ..................................... TTTCACCTTTACCAGTTACTCTTGTTGTTCTAAATGT 153749 37 100.0 37 ..................................... ATCTGTTATATCCCCATGAATTTCCGTTAAATATATC 153823 37 100.0 36 ..................................... TATGGAGTGTCTTGTCTTATAGCTGATGCTACAGCT 153896 37 100.0 37 ..................................... TTTTATAAAAGAAAGGAAGAGATAATATGGATTCAGT 153970 37 100.0 36 ..................................... TTCACTGTATTCAGCAAACTAAATAATGCATCAGCA 154043 37 100.0 37 ..................................... AAGCTCTAGTTGTTTCTACTATATCTCCTTCATATAT 154117 37 100.0 36 ..................................... TTGTCAACCTTTTTTTCAAAACTTTTTCTGAAATTT 154190 37 100.0 36 ..................................... GTACTTGTAATTCTTCAAGTTTCTTACAATTAACAT 154263 37 100.0 37 ..................................... GTCAAAACACTTGACAGGCTAATTTAATTTGCTATAA 154337 37 100.0 38 ..................................... TATATTCATCTATTGAATTTTTACAAACATAGTTTATG 154412 37 100.0 36 ..................................... TTTTTACGACAAATACAAAAACTTCTTATCAAAAAT 154485 37 100.0 40 ..................................... TATATATCCCATTTATTAACCTCATTAAAGAATTTTTTTC 154562 37 100.0 36 ..................................... ATATTCCCATAGCTACTAATATAGGAAGTACTGAAT 154635 37 100.0 37 ..................................... ATTTTAGAATAAAAACACATACCTATTATATTATTGA 154709 37 100.0 37 ..................................... GTTAATAGCTCTATGGATCTAAAAAGATAGGTGTAAA 154783 37 100.0 37 ..................................... AAGCATTACCTGGACCAGCTAAAGCGCTTGTTGTTGT 154857 37 100.0 37 ..................................... ATAAGAAATTGCAAGAAGCTATAGCTATAGCCGAAGA 154931 37 100.0 38 ..................................... AAATTCCAAAATGTTTTATATCCTTTGCCTATCTTCTT 155006 37 100.0 36 ..................................... GTAGATTGTGGTAATTATATGGAATGTGAGAATTCA 155079 37 100.0 36 ..................................... GTAGATTGTGGTAATTATATGGAATGTGAGAATTCA 155152 37 100.0 37 ..................................... ATCTTTCAAGTCTTATAACAACTGGAGCAAACTTTGA 155226 37 100.0 38 ..................................... AATCAAGATTTTATAGCAGATGAAGATGCGCACATATA 155301 37 100.0 36 ..................................... AATTATTAACTAACCCTTTTCATTTTCCTTCTCTTA 155374 37 100.0 37 ..................................... ATATTTTCTCTAAGATAATTTTTACCTTGCATGACAT 155448 37 100.0 36 ..................................... AAAGAAAAATATCCGAGTTCAATAAAAGAAGAAATA 155521 37 100.0 38 ..................................... TAAATAACTCTGTTCCATTCGAAATAAAAAGTTTCTTC 155596 37 100.0 37 ..................................... GTACATATGCTTATATTTGTATAAAAAGTGAAATAAA 155670 37 100.0 37 ..................................... GAGATAGATTATAAGGGATGCAAAGCTATTAGCTATG 155744 37 100.0 37 ..................................... TTAAGTATAAATTTATCTAATTCTTTACTTAAATAAA 155818 37 100.0 37 ..................................... AACAAAAATATCCTCAAACAATAGCAGTTTCCGATGT 155892 37 100.0 37 ..................................... TTTCTACTTTTCCATCGTTTACGATTGCTTTTATCAT 155966 37 100.0 36 ..................................... GTATCTGCTATTTTATTTACACATTCACTATTATCA 156039 37 100.0 37 ..................................... TGAGGTATATGCAAGCCAAGAGCAAGGATTTACACCT 156113 37 100.0 36 ..................................... ATTAAATCATTTGTAATTTCTTTTACAGCTTCATAC 156186 37 100.0 37 ..................................... TAAAAACATCTGGTAATCCATCATCCCTTTTTCTATT 156260 37 100.0 36 ..................................... TTAAAAATAGTAACAGTCTATATGGCTTTTTAAAGC 156333 37 94.6 0 ...................................TA | ========== ====== ====== ====== ===================================== ======================================== ================== 57 37 99.9 37 GTTAAAGAGTAAGTTCCATTAAAACAAGGATTAAAAC # Left flank : GTTAGCTTTAAATCAAAATAATATTAAAAAATATACAGCAGCAGATCTAATAGAAAAAGAAGAAATACTAAAAAGAGTACTTATAGGAAATATTTTGTCTTTTTCAAAAGGAATGGATTATACAGTTGACGAAACTATAAAAGTAAAGTTAGACTTAAATCAAATAGATGTTAAATTTAAACAAAAAGAAATGTTAGCTTTTATAGGAGAATTTTTTATAAACTTTGAAATACCAGATAATTTTGCGATAGGTAAAGGAATATCGAGAGGATTTGGAACTGTAAAAAAGATTTAAAAAAGATTTTTAATAGTTTTGTTCCTACAAAATTATTGGAAATTTTGAACTTTGACAATTGAATGTGTTGGAATTACTTGGTTTGAGATAGATGTTAATAAGCTAAAAAATGCATTTTTTTAATGGGAAATCATTGTTTTGAGGTTAGATGAAAATAAAGCAACACATTGAAAATCAGTAATTCCAATGGTTTTAGGTTCTACGA # Right flank : ATCAAAAATGAAAAATATATTGATGTTTAAGAAGGAATTTGTCATATACTAGCAGAAATAATAAAATTAAGTAATATAAAAACTAAAGAAGGTGATATTAAGCTATGAAGCTAGTTGTTAATTCGGAAGGAGTATATTTGACTAAAGTAGGCGAATGTTTTTGTTTGAAAAAAGAGGGGCAGAAACAAGAAATTGCTGCTAAGAAGGTTGAACAAATAATTATAACGACATCTACAGCTTTGTCTACTGATGCTATTGAGTTGGCTGTTGAGAATAATATTGATATAGTGTTTTTAAAAAAGTATGGAAAACCTTTTGGAAGAGTATGGCATTCTAAAGTTGGTAGCATAAGTACTATTAGAAAAAGACAGTTAAATTTAGATTCTAATAAAATGGGTACAATTTTAGTAAAAGAGTTTTTGACTCAAAAGATGACTAATCAGGTTGAATTTTTAAATGAATTATCTATGAATAGAAGAGATAATAGAAAAATTGAAATA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAGAGTAAGTTCCATTAAAACAAGGATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 3 452099-451539 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBQJ010000001.1 Intestinibacter bartlettii strain MSK.13.56 DAHONILI_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 452098 36 97.2 38 .....................G.............. GAAATATCATCATTCCTATTACTAATAATCCTAAAATT 452024 36 97.2 40 .....................G.............. TGTTACGTATCTTCCTATGTAACTTGTGTAAATATATCCT 451948 36 97.2 36 .....................G.............. TTAATGACACATAGCATGCAGTAGTACTATCTTCTA 451876 36 100.0 40 .................................... TGAATTCAGCTATAGATTTTTGAGTAGGATCTGCTAACAT 451800 36 100.0 40 .................................... TATTGTTCACACATAAAGCATTGTGTGTCTGATGGGTAAG 451724 36 100.0 39 .................................... AATTTGCTACCATGTAGCTATATGCAAATGTTTGTGCTT 451649 36 100.0 39 .................................... GATTCATCGAAGTCTTTGTTTCCACAAAAATGTCTGTTG 451574 36 88.9 0 ..........G.............A.A...C..... | ========== ====== ====== ====== ==================================== ======================================== ================== 8 36 97.6 39 GTTAGATAAGATATCTTCCCTAAGGGGAATTGAAAC # Left flank : TTTACTAGGAGGTGATATTTATGAAAAAATTTATCTTAATTTTAAGAGAAAGGGGTATAAAAAAACGGAAAATATTATATTTGAAAATGCCTGAATAATGTTGATATTTAGGCATTTTTTATGCTATTATGTAATTAAGAAAGTAAATTTTACTTTGAAAATTTCAATAGAGATTATGATATAGTGATTTAAAAAAATTTGATTTTTATGCGTATAGTATACTAATAAGATCTAAATTAAAGTTTAATGATTATATATTTTTTAGTATAAAATCAAATAAAAGAATTAAATATCTTATCTAACATTATGATATTCTAACTTTTAAATTTTAAGTCTTTAAGGTATTTTAGCTTATTTTTTAATCCAACCGCCACGCACCAGTGATACCAACGGTTTGAGGTGGTTTTGAGAACGTAAAGTTTTTCTTATATGTAAGAAAAAAGTTGTACCCCGCAACGGGGGTCTGAAAGCTAGTAATTGCAAGGGCTAAAAATTTAGGG # Right flank : AAAAATTTTACTATTTTTATACTCTATTTAAATTGTTTTATTGAATAGGGTGTTTTGCATAATTGAAACTTGCTAAAATATGTAAGATGTTTTAAAGATAAAAAATAGATTTTTAAGATATGAACATTAATAACAATTTTATATTTATGTTATTATTTGTATAAATTTATATGTATAATAAGGAGTGATTTACATAAATAATTCTAAAGATAAAGATTTTTTATGTAGTTGAAAGAAGTGTCATAAACAGTAAAAATAAAAATAACTCCCCCAAAAAATAAAATTTCGGGGAAGTTTAATTTTATTTATCCTCTATAAAAGTTTATTGCCATATATCCAACAGCTTGTGTTGCAGACCAATCAAATGCAAATCCTACTGGTGCACTGACTAGTGGAACCATTTTTACAAAGCTTGTCATAGATTTTTGTCCAGCTTTAGTTATAATTTTTCGCCCAACGACTTTCCATATTTTGACCATAACGTCTCTTGTTATATATTT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:0, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGATAAGATATCTTCCCTAAGGGGAATTGAAAC # Alternate repeat : GTTAGATAAGATATCTTCCCTGAGGGGAATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.60,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA // Array 4 469413-469745 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBQJ010000001.1 Intestinibacter bartlettii strain MSK.13.56 DAHONILI_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 469413 36 100.0 39 .................................... GAACTTTTCCGCTAGATGTTTGGTTTTCATATCCTCCAT 469488 36 97.2 36 ..........G......................... ACGAATTCTATTAAGTCATCATGCCAACGACCTTTT 469560 36 100.0 39 .................................... CATTACCAAGAGATGTTGGATTAATAAAAGATGATTTTC 469635 36 100.0 38 .................................... TTTTCTGTTGCTAATGCCAATTCTTCATCTGAAGCATT 469709 36 75.0 0 ....A......C...C........ATC.C.A....T | T [469737] ========== ====== ====== ====== ==================================== ======================================= ================== 5 36 94.4 38 GTTAGATAAGATATCTTCCCTTAGGGGAATTGAAAC # Left flank : AAAAGAAGAGAACTTGTAAAATATCTACAATCTTATGGTGGAAGGGTCCAACGTTCTGCATTTGAGTGTATCATGACTAAAAAGCTTTATAAAAATTTAATTAAAGATATAAAAAAATACATGGATCCTAAAACAGATTCTATTAGAATTTACAAATTAAATCGCGACAATAAAATTTTAAACTTTGGAGTTAATAAATTGACTGATTTAGATGAAATAAAAATTCTATAATTTTTTAATCTTATAGACTTTTTGGTATATTTAGTATAAAATCTAATAAAGTAATTAAATATCTTATCTAATATTGAAATTTTCTAACCTTTAAATTTAAAGTTTTTGCGGTATTTTAGCTTATTTTTTAATCCAACCGCCACGCACCGCTGGTACCAACGGTTTGAGGCACTTTTAGGGATATAAAGTTTTTCTTATATGTAAGAAAAAAGTTGTACCCCGCAACGGGGGTCTGAAAACTAGTAATTGCAAGGTCTAAAAATTTAGGG # Right flank : TAGTACCAACTTTTTATAATATTTTTTTAGACATTACCCTCAAAAAAAAAGCCATCAAATTCAACTAAATTCTTTGTCTTTTTTTAATCTGTATTCCTCATTTTAAATTAATCAATTTATACATAAAAAAAGACACTGCACAAACCACATATTGCACAATGCCCTATAAAAACTATTTAATTTTATAATACTCATACCATACCCTCCTTCTATTAAAATGCAATTGGACAGCCTGAACGTTTGGAACAGAACAGGCATTTAAAATTCATTGTGATACAACTCATAAACTCACCTCCTATATAAAAATTAATTCCTATTTGTCATATTTCCCACTCATAATGTCTGATAAAATATCGATTAGCCCTGGTGCTGCGACCTTTAGCAAGTCTTTTAAAAGTTTCCCATAATCCATAATAATCACCCTCCTTAAACTATCTAAAGATATATTGCTATTTTTATTAATGAACCTATTGTACCTATGCTTATACCTGACATAATCT # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:0, 3:3, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGATAAGATATCTTCCCTTAGGGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.70,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA //