Array 1 70376-72841 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAECSS010000004.1 Klebsiella pneumoniae strain CCBH27867 NODE_4_length_142219_cov_16.436416, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 70376 29 100.0 32 ............................. TCGCGCGTTGGGGCGCTGACGCGTATCGACGA 70437 29 100.0 32 ............................. ATGACTGGGCCTTATAATCACGGAAATAATCC 70498 29 100.0 32 ............................. AAAACGCGACAATCGCAATCAACAGTTATTTT 70559 29 100.0 32 ............................. CGCAATGAACAGTCTGGTCTGGTTATTTACTC 70620 29 100.0 32 ............................. ATCCCGCCGCAAAAATTACACGGAGAAATAAC 70681 29 100.0 32 ............................. AACATCCTCGACTGACACAGGGCATCGCTCTT 70742 29 100.0 32 ............................. AGTAAAGGGAAGCTGAGTCATGACAATCAGTC 70803 29 100.0 32 ............................. CGTGTCGGTCATGGCGATGCTGGGCGGCGATA 70864 29 100.0 32 ............................. CGCCTGGGGGGATCGCGGTGAGTGATTCATTT 70925 29 100.0 32 ............................. CGCCTCAACAAATGCGACTTCATAGCCTGCTG 70986 29 100.0 32 ............................. GCTCGGTGTGGCCTAAATCAATTCGCGGATCC 71047 29 96.6 32 ............................C CTTGCATACGTGTTACCCTCCATAACCTCACA 71108 29 100.0 32 ............................. CGTCGCCTGGCCGTCTGGTAAGTCCGGTTTTA 71169 29 100.0 32 ............................. CAGATATCGGCACCGCGAGGTTCTGAGTCGTA 71230 29 100.0 32 ............................. AGATCGAATAGTCGTAGTTTGTTTTACGGCAG 71291 29 100.0 32 ............................. CTGGAACGGACCCTGAGCGCCTTTGGGGGAAA 71352 29 100.0 32 ............................. ATTTCTCCGGTTGCCCCGGGTTCCCGGGGCAT 71413 29 100.0 32 ............................. GTGCTGGCCTTGAGCTTTTCAGCAATACGTCC 71474 29 100.0 32 ............................. TGCAGACGCGGCACTTTTACCCACGCTTGAGC 71535 29 100.0 32 ............................. ATATTCCGAGCGTTGCCAGCCTGCTGCGCAAT 71596 29 100.0 32 ............................. GCGGCGGCGTTAGAGCGCGCGCCAGCGTTTTC 71657 29 100.0 32 ............................. ACGGCATCTGCGAAATTCATGTTGCTAAATAC 71718 29 100.0 32 ............................. GCTGCGTATAAAGGCTGCAGACCGGAGAGAGG 71779 29 100.0 32 ............................. ACTGCGATTCGTTGACGATTATTCCTCCGCGA 71840 29 100.0 32 ............................. CGTTATTTTAAAAGCTGACGGCGAAGTGGTGG 71901 29 96.6 32 ............................A GCGCACCCGAACCATTACGGGGCTTGCCATTC 71962 29 100.0 32 ............................. GCCGAGTTCGTCAATGCTATGAATTTTATAAC 72023 29 100.0 32 ............................. AGTGGCGTTAAAAATGTCGCGGGTAATTTGTT 72084 29 100.0 32 ............................. TGCTGATTTCGTTTGCAGGGAAAATGGATTTT 72145 29 100.0 32 ............................. GGCAGCGAGGCGCAGATCCCGCAGCTTTACCA 72206 29 100.0 32 ............................. TTCGGCCAATAACCGACTATGTGAGGGACTTT 72267 29 100.0 32 ............................. CCCGATAAATTCACTCTGTGTCATACGGTGAT 72328 29 100.0 32 ............................. ATCTGATCAGCGAATACATGAAGAACAACCCA 72389 29 96.6 32 ......T...................... GTTTGATCGGCGTCAGGACAATATCCGCGGGC 72450 29 100.0 32 ............................. TGATCCACGTAAGCAAGCAAAGTGATCCGCCA 72511 29 100.0 32 ............................. AGGAACCGTTCCGGCAGATAGCTCTTACGCTC 72572 29 100.0 32 ............................. GCATCGACGCCCGTATCGTTATCGACAAAATA 72633 29 100.0 32 ............................. ACACGTCGTTAGGTGTTCCGTACTGGGAGAAA 72694 29 100.0 32 ............................. CCAGGCGACCGTATCTGGGTGCGTGAAACGTG 72755 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 72813 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 41 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAAATTGTTGTGATAAAGTTGGTGAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGTACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //