Array 1 119-1166 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVCX01000071.1 Pseudomonas aeruginosa strain PABL045 NODE_71_length_18574_cov_63.3562, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 119 28 100.0 32 ............................ GATGGCCGGAAGCAACGGCAAGGGCTGCAACT 179 28 100.0 32 ............................ CAAAGCGTGGCGAATATCTACACCCGCTCGCA 239 28 100.0 32 ............................ CGGTAGAGACGTCGGTGAGCGCTGCGATCTGC 299 28 100.0 32 ............................ GCAATCGATCAAGCTATGACCGCCGAAGCCTA 359 28 100.0 32 ............................ TCGACGTTGCCGACCCGCGGCCGCGCCCGGTT 419 28 100.0 32 ............................ TCGGCCAAGGCTCCGGCATCGAGCACGATGCC 479 28 100.0 32 ............................ TTGAGGAACAGGCGCGCTACGTCCGCCGCGAA 539 28 100.0 32 ............................ TTGATGATGCCGTCCTGCTGTTTGCCGGCGAT 599 28 100.0 32 ............................ TGTACCAACTGAGGTGCTACCTCAACCATGGC 659 28 100.0 32 ............................ AGGCCGATGGAGTAGCCGGACAGCACTGAGCC 719 28 100.0 32 ............................ TAGTGTGGAATTGATGTGCGCATCTTCTTAAA 779 28 100.0 32 ............................ TGTGCCGGGCAGGCTGGCCAGCGCCTCATTGA 839 28 100.0 32 ............................ GTCGGCCTGGAGTTTCGTCGGGCGTACATCAG 899 28 96.4 32 .................T.......... CAAGCGGACGGTGACACGGACTATCAGACCGG 959 28 100.0 32 ............................ TCCGGCACGCTGTGCTGAGCCTGAGCTACAGG 1019 28 100.0 32 ............................ ATCTCAGCGCCGCCTGTTCTGCCGGCCGCATC 1079 28 100.0 32 ............................ TACGGGCAGTCACGGCGAAAGGCACTCAGCGA 1139 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 18 28 99.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : GACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTAG # Right flank : ACTCAAGAAAGAGCAGAACGGCCAGCTTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAATAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGCGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //