Array 1 341449-338031 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHHJ010000004.1 Geomicrobium halophilum strain DSM 21769 Ga0415242_04, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 341448 30 100.0 37 .............................. TCGAATATCTTCTATCGAAAATTTAATTGGAAATTAT 341381 30 100.0 36 .............................. TCACGCCGCCATGTGCTGTTGTTAAAGAATGCTAAC 341315 30 100.0 35 .............................. ACCAATAAACATGCCGGCCATTTGGGTTTGCTGCG 341250 30 100.0 37 .............................. TCAAAAGTTGTGGTTGATGGAAAAGGGAAGGAATACA 341183 30 100.0 37 .............................. GGGTTGTGCAGGTAAATACAACCCGGAACGCTAACGG 341116 30 100.0 36 .............................. GATAATAGACATTCTCTTGACCAAAACGGAAAGATT 341050 30 100.0 35 .............................. TCGACGGTGTAGGAAGCATGGGCAGCGCGGTTTGG 340985 30 100.0 36 .............................. CTTACCGCTCCATCTACAGCTACACCTAAGCAGAAT 340919 30 100.0 37 .............................. AGGTGTGTAATATTGCACTAAAATAGGCAGCAGTGCC 340852 30 100.0 37 .............................. GGAACTGCAGACACGATGAGCGGGGAAATGAGTTCAA 340785 30 100.0 37 .............................. TTAATCAACTCAGCGACGAACTTGCGATGCAGGTTGA 340718 30 100.0 37 .............................. CTTCATCGCCCCTATCATAAAAATAGACGGGGAGCAT 340651 30 100.0 36 .............................. TGCGCTGGCAGGAACTAACGCTAGGCGCGGGCGAAG 340585 30 100.0 37 .............................. CGATGGACGATCTAGGCGAAGGTATACAGGCAGCCGT 340518 30 100.0 35 .............................. AGGTGTAATAAAACGTGAAGAAGGTGTCTGTTTGG 340453 30 100.0 36 .............................. TTTTGAAGTAGGGAATTGGTTGCGGAAATCTATCGG 340387 30 100.0 37 .............................. ATGAAGCCGCCGTGAAAGCGGCGCACCTGCTCAGCAA 340320 30 100.0 39 .............................. GAGTCTTGGGAAGACGTTGCAGGTTCAGAGGACGAGCCG 340251 30 100.0 39 .............................. ACCTGCTGTGGGTGACAGATATCCAGAGCCGAAAACCGC 340182 30 100.0 37 .............................. TCGTACTCTATCTATAAATATATAAACAGGGGATATC 340115 30 100.0 37 .............................. TCTACTCAACTAACTGGGCGGAATGTTGTGGAAGTCG 340048 30 100.0 36 .............................. TTTATGAATGGATGCCCGATGAAGGCGGCGTTGGCG 339982 30 100.0 36 .............................. TGGACATCGGGGAATTTGTTTCTGAGGGACTAGCCG 339916 30 100.0 36 .............................. TGGAAAGATGGGAAACCAAAAGATTTCCTTATCCAT 339850 30 100.0 36 .............................. TCATTGAATTTATTGACGATCTGACAGTTGGTGAAT 339784 30 100.0 35 .............................. CAGGAAACCATTGACTACTGCAAATACGACGTTTC 339719 30 100.0 36 .............................. ACAACTTCTTCTATGATGACAAAATTTTACATTACA 339653 30 100.0 35 .............................. TCAGTATATATTACAAGCCGGATCAACTTATCAAG 339588 30 100.0 37 .............................. CTTGAAGCTGAAATCGAGAGGCAAGCCAATGGTTACT 339521 30 100.0 37 .............................. TTGGCTTATCTCGGAGCTGAAAAAAACGTATAGTAAT 339454 30 100.0 36 .............................. TGAGTTGGATGTCGCTCTAAATTGGATGAAGCGTTA 339388 30 100.0 38 .............................. AACTCATCCGTCATAAGGTCATCCATCGATCCAAGGCA 339320 30 100.0 35 .............................. TGAAAAGGGGAAGGTGTCACCAGAGCAGGACATGC 339255 30 100.0 37 .............................. CCTGCTTCTGTCTTATCTTTTATTTTCGGCTTTAACG 339188 30 93.3 36 T..A.......................... CCCAACATTCAGCTCCGTTTGTGGAGACTCCCTTCT 339122 30 100.0 35 .............................. TACCATTGAACGCCGCCAAACGTGGCCGGGCGCAC 339057 30 100.0 37 .............................. TTTTCTTCTCGTCACGTACAGACAGCCCCGCGTTTTC 338990 30 100.0 35 .............................. TCTTCTTCGGATCAATCATCGGAACGTTAATCATC 338925 30 100.0 35 .............................. TCTATCAAATGTGGGGATTGTTCGATTAAGTTTTC 338860 30 100.0 37 .............................. CCTTCTTTTGTTAGATTTTCACCCATTCAACATCCCC 338793 30 100.0 39 .............................. TAGATACCCTGTACCGTCACCCTGTCGGTGCGGGTGAGA 338724 30 100.0 35 .............................. TGGGATAAAGTATGGACGTGGGTGTCCGATTTTAT 338659 30 100.0 37 .............................. CCGAACCGGAAATAAGCACCTGCGCGCTGGGGGATTA 338592 30 100.0 37 .............................. CTCACCGATCCAGCAATTGCAGAGTCAGACCAACTTG 338525 30 100.0 38 .............................. TCAAAACCAAATAACAAATTGCTTTTTTGGAAGACCTC 338457 30 100.0 35 .............................. TGCATACCGTATAAAGACGTTCGATCCGTCCCCAC 338392 30 100.0 36 .............................. CACAGTGGCAAGTAGTTTTCACTCGAAAATATATCT 338326 30 100.0 36 .............................. ACGGCAGACGATTGGGTAATCCGCTCGTTACCGCCA 338260 30 100.0 37 .............................. ACGTCCCAGATACTTCTGGTTCACCATCCGTAGATGA 338193 30 100.0 37 .............................. ATGATGTATTGTACACCATTGATAGAACCTGTATTTC 338126 30 100.0 36 .............................. ATGGGAAGATTGATTCAAACATTCAATTAGACATTG 338060 30 96.7 0 ..............C............... | ========== ====== ====== ====== ============================== ======================================= ================== 52 30 99.8 36 GTTTAGATCGTACCTTTGAGGAATTGAAAC # Left flank : CGAAAAAGAATATAAGCCTTATAAAGCTTCGTGGTAAAGAGGTGAACAATTTGTTTGTTATCTTGGTCTATGATTTTGCCCAAAAAAGGGTAAATAAGGCTTTAAAGATTGGCCGTCGATATTTACATTGGGTTCAGAATTCTGTTTTGGAAGGTGAGATTTCTAAGGCGAATTTTGTTAAACTAAAAAAAGAATTGGAAATGTTAATAGATCCCGATGAAGATTCTGTGATCCTTTATACTTTCCGATCGCAAAAATATTCTCAAAGAGAAGAAATGGGCCTGAAAAAAGGTGGTGATGATAACATCATCTAATCCATGTTATGGTGTCAATCTATTGTCGTCGACCATTAATAGCGTAATAAACCCTGAAGATCGACGACATGAATTATCTTCTCAATAGGGGATCTATCAGGGGGTTGAAAAATTTTATCTATATTTTCAACAAAAAGCAGGAAATCTAGATGTAGCATAGAACGCTTATATTAGCCATTTTTTGGG # Right flank : TTCCGGATAATGAAGATTATCCAGAATTCTGGATAATAAGAATAAAGCGAGTGTCGAAGGGACAGTTGGATGAATTTCTCGACAGGTGATCGCGCCACTAAGAAACTATAAATGTCCTTCATGTGTTGGAAATTATTCAGGCGAGGTTAAAAAGAGCATCCACGGTTTTCTGTTCACAATTTTTGCCGGAAGGATGGCATTCAAAGTTAGGACAAGCACAAGTAGCTGATGCGATTCTTGACCGCATCGTTCACGATTCCTATAAGATTCTCACTGATGGGGAAGTTTCGATGAGAGAGCGCCATGGTTTGGGGGATCAAATGACATTTCAATAAAGGTGGAAAATCGTATAGCGAAGCATTTTTTCCACACGTATTTACCTGACGAGGTGATGGTTATAGTGGAAGATTAGCTATTGCCCCCCTTGCACATGGAACGAGGAAGAAGATTTAAATCACGATGAACTTGTTCGTTGGGCCATTGAGATTATTGATGAGCAT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAGATCGTACCTTTGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //