Array 1 30397-28658 **** Predicted by CRISPRDetect 2.4 *** >NZ_PIUN01000012.1 Klebsiella pneumoniae strain 14CSI Contig_12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 30396 29 100.0 32 ............................. AGATCCGCCGCGTACGTCGCGCGCTGGAAGAT 30335 29 100.0 32 ............................. CAGAAATTTACCGTTGCGCCGGCGGTTCAGCA 30274 29 100.0 32 ............................. CGCAGCTGGATTCCGAGCGCGTGGTGTTCGGC 30213 29 100.0 33 ............................. AGGTATCAGCAGAAATGCTGACCCGGATCCTGC 30151 29 100.0 32 ............................. GTGCGGAACAAACCAGTAGGTGTCCAGGTCGT 30090 29 100.0 32 ............................. CTAAACCCTTTCCCCTGGACGGAGGCGCTCAC 30029 29 100.0 32 ............................. ATTAACGTTTTAATCCCGATATAGTCACTGGA 29968 29 100.0 32 ............................. TGACAACCAGATCCGAAAATCCTGGAGCCGTG 29907 29 100.0 32 ............................. CCATTTCCCCGAGTCAAAATCAGTAAAAAAAT 29846 29 100.0 32 ............................. GCGCGCGCCTCTTCGAGTTGTCGTATCAGCGA 29785 29 100.0 32 ............................. GGGACAAAAAATATCGGCGCCAACGCGGCACG 29724 29 100.0 32 ............................. CACTGATCGCGGCGTATAGCGATACGGGCCCG 29663 29 100.0 32 ............................. GCTATTGACGGGCTGAAAGAGGTGCAGGAGGC 29602 29 100.0 32 ............................. CATTTCAGGCGGCAGGGCGCGCACAACTTGCC 29541 29 100.0 32 ............................. CATACAGTATTATCATAGCGAATTCCCATTGG 29480 29 100.0 32 ............................. CCACCGAACTGGCCGTGCACATTCACCTCAAA 29419 29 100.0 32 ............................. GCGCTCGACCGCCAGACAATCGGCTTTAACGG 29358 29 96.6 32 .............T............... TTTGCGGAAAAAGTGGCCGCGTATTCCGGATT 29297 29 100.0 32 ............................. AGTGCTACACCGATACTGGCCCATCATTCCAG 29236 29 100.0 32 ............................. GTTGTCAGTCAGGGAAAATCTATCCGCAGGGG 29175 29 96.6 33 ............................T GGCGGCGCGACAAAAATTATACCCAGCAACGAA 29113 29 96.6 32 ............................A GTCGATCCCCACGGTTGAGAAATTATTGACCC 29052 29 96.6 32 ............................C CCTGAATCCGTCAACGTTTGGAGTCTTGAGTT 28991 29 100.0 32 ............................. GGATTTCCATCTCCGGCGTCTGACTACGTTGA 28930 29 96.6 32 ..........A.................. ACGGTAATTATTTATGCCCTGGATAATATTGG 28869 29 96.6 32 .......T..................... TCTGACTGTCGAGGCATGATCTGCCCTCCGAT 28808 29 93.1 32 A..................T......... TGCGTCACGACGCCGGCGACAGTGACATCGTC 28747 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 28686 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 29 29 98.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGACACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCAGGAAAGTTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //