Array 1 238410-238775 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017071.1 Geobacillus thermoleovorans strain FJAT-2391 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 238410 36 100.0 30 .................................... ATTCCGGATGTAACGACAGACGGTGGTGTC 238476 36 100.0 30 .................................... CCCACACGCTGGCGATTCGGTTTTTCATCG 238542 36 100.0 30 .................................... TCCGCCTCTTTATTATCTATCTGCCCGGCA 238608 36 100.0 30 .................................... CCCTGCCAACACCGTTGCAACTGCCGCCGC 238674 36 100.0 30 .................................... TATTCGAGGCTTGTGCCCCGTGCGTGGCGA 238740 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 100.0 30 GTCATAGTTCCCCTGAGATTATCGCTGTGGTATAAT # Left flank : AAACAAGGGATCAAACAAGGTATTAAACAAGGGCGCCAACAAGGGATTGAGGAAGGGAAGCTCGACGTGGTGAAGAGAATGCTGGCGAAAGGGTATGATGTCGACACGATCCACGAACTGACCGGGCTGCCGGTTGAGAAGATCGAACGGGTGAAGGGGTAAGCAGAGCAGACTCTTCGCCGTCGAGCCTCACATTGTCGTCGACCCCCAATCGTGCAAAAATCCCGGGGGATCGACGACATTGGTTTTGATCGCTTAATCTCTAAAGCCATCATGGATGGGCTTGGTTGACAGAATATTCGGGACGCGTTATGCTGAAGTTGCGGTTGCGGGGGAAAGCTTGATATGGCAACGCTTTTTGGATTTTTACCATACCTTATGAGGGATTGAAACGATGCCCCATTCCTACTTCGGGGTCGTTTTGTGTTTTTATCGTGCCTATGAGGAATGAAGACACCTGTTCTTCCTATAGCTTATCGGTAGTATGTCATTGCTTTAAT # Right flank : TTGCCTCCCGTTGTTGTGTACGTTTCCTCGCGTCATAGTTCCCCTGAGATTATTGTAAATTAGCACATTATTTCAGAATCACTTTTTCAAATTATTTCAGATGGATTCTGAAATAATGTGCAAAATTTTTGCGGATTGTTCCGGATTTTGCACATTCTTTCGGAACGTTTGCACGCTCTTTCAGATGAAGATTTCCAGCGCGCCTGATGGACCTATGGAAAAGAGAAAGCACAAAAGAGGCCGATTCGGCCCCTTTCGTGCTAATACCCCATTTCCTCTGCGGCCATGCGCACCATTTCTTCGTCAATGGCGTCCTTTTTCAGCTGATACCCGTATAACAGGCACGTCGTGGCCAACGTGTTGATCACCCGAGGCCATCCCCGCGACTGCAGGGCAATCGCCTCTAACGCCGATGGGGTGAAGATCGGATGCTTCGCCCCGGCCTGTTTCATCCGATGTTCGATGTAGCCCGCCACCTCTTCCTTCTCCAGCGGCCCCAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATAGTTCCCCTGAGATTATCGCTGTGGTATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 245892-246059 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017071.1 Geobacillus thermoleovorans strain FJAT-2391 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 245892 36 100.0 30 .................................... CTCGTCTGTTCTGTCAACAGGTTCTGCACA 245958 36 100.0 30 .................................... AAACGTTCTTGGCTAACGTCCAACCAAAAT 246024 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 100.0 30 GTCATAGTTCCCCTGAGATTATCGCTGTGGTATAAT # Left flank : CGTTTCGAACCATGCTTTGACCGCTTGCCAGATGACCGGCCGTGTATATTGAACATACGGGAGGAGGAAAGAAGGCAGCACACTCACGGTTTTACGGCATTCTTGACAGCGATATCGTGCGATCCAAAGGCGATACTCCCCCTCTGCCGTCAACGCATAGCGTTGGTAGTATCCATGACGATGCAAGGGGCGGCGGGACGGACAGTGGGGGCATTGTCTCACGTCAGGAAAATCGTTCCCTTTCCCACGATCCGTATACGTTTGAATGTCAATGCCAAAGTCGTGAAACTGGATCACACTTCCTTCCCCCTCTCCTTGAAACGAATGGAAATCTTCGTCCGAAACAATTCACAAAAAAATTAGCACATTCCTTCAGAAAAGGGGAGAGGGCTTTCTGAAAGAATGTGCAAAAAAATGGGTGTTTTGTGCTGAAATAAAATGATAATTTACAATTATCGCTGTGGTATAATTATTTTTTGTGATGAAACTTCAAATGCGAT # Right flank : TATCCAGCGCGGCAGGATTTAAGGGCATTGGAGTCAGTCAAGACTTTGTGGAGAACATTTTTTCGGTTCACTACGGGTGTTGTCAATCACTAGTTAGCGAACCATTTTCAGGAATTGATATCGTAAGCGCTTTCGGACTCTCATCCCTCATCTTGAAGTGATGATATTGTATTCCATTTTTTTACACCCAACCAAAATCCCGAAGCGCCGACAACGCTTGATGGATCGGCGTCCCGGATGACCGCTGCAGACACGGTAGATTCTGACGCACCACATCTGCCCACAACCGTCCTGCCTTCCGTTTGGCCTGTTCGATCCGCTTGGACTTCGTCGAGGCCGAGGCTGCCGTTCGGGTCTCTTCTTCCTCCACCAACTGCCCATTTCTCCGCCAAATCCCGTCGATTCGGGCTGCCATCGCCCTCAGAAACGCCCGAAGCCCTTGGTCTTTCCAGCTGCGGCGGGATTTCACCCGATGCGCAAACCGGCTCATCACGCTCTCG # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATAGTTCCCCTGAGATTATCGCTGTGGTATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 3 250091-250319 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017071.1 Geobacillus thermoleovorans strain FJAT-2391 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 250091 30 100.0 35 .............................. TCCGAACGGCTTTAATGAGGAAGATAGCAAGAATA 250156 30 100.0 38 .............................. TGATCCAGCCGGTTATAAACGTGAAAATGGTGAGCTGA 250224 30 100.0 36 .............................. TATTCATGCCCCCGCTCGCTTTCCGGGATTCCCACG 250290 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 4 30 100.0 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : CCACCCCATCGGTTCACTTGCCTGCGGAGTGGCTCGCCAAACTCGCCTCCGTAGCGTCAGCGCCGCTGCAGCCAGTGAAAGAAGCGATGGCGAAAACGGAAAAAGCGGGATACCAAGAGGCGATCATCGGCCGACTGCTTCGAGACATAAAAAGTTAGCACTCGCCCTTGTTCATGCAAGTGTTGGGATTCCAATGTTTGTATTCGTCTTGCCTGCGATGGATGGGCAGGCGGCGCCCCGGTTTTATTCACCGCATGACGAGCGCTTGCCCTCGCTTAGGCAAACAGCAATCGGCAAACAAGGCACGCCAAACGCTAGGAAGCAGTCTTCGTTTGTCGTCGACCTCCAATGACGCAAAAACCCCAGGGGGTCGACGACATTGGTTTTGATCGCCTGATCCCTACAGCCATCAAGGGTAGACTTGATTGACAGAATCTTCGAAACGTGTTATGCTGAAGTTGCCGTTGCAGGAGAAAGCTTGTTATGGCAGCGCTTTTTGG # Right flank : CTTCGGCAGATGATCAAAGAAGGCCTGGAATCCGGGATTAGATTCGGCACAGCGAACCGGGAAATCTGCTTGTGTCTACTAGTTGCAATGAATGAACTGGGGGTGAAGAAACCATGATCACGATCTATGACTTGATCGGCTACATTCAAAACATGGACAACATGGACAAATTGGATGAAATCATCAGTCGATGGTACTTTCAAACGTCTGTCTGGACATCACAGGTGAAAGAAGAAGTCAAAAAAGCGGTGGTCGAAATCCTACAACTAGGCGAACCTAAAGTGTACCAGTTTTTTGTGGATATGTACGGTCTTAAAATGTGAAGTTTTTATCGTACCTATAAAGGGATTGAAACGTCATCCCGGTCGTGACAATTGGAGTTCCTTCTGCCGTTTTTATCGTACCTATGACGAATTTCTCACTGTGAGCAGGATGCCGCCTTGGGGACGGCGAATAGAAAAAGAGAGACCATCAAGGTGAGGTGATTGAATGGCGATTGA # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.52%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 4 252784-253273 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017071.1 Geobacillus thermoleovorans strain FJAT-2391 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 252784 30 100.0 37 .............................. TCAACGGGATAAAAAGGAACTGTCGATCGGCCATATT 252851 30 100.0 36 .............................. ATTGTGAAGGAATTGGGGTACGAATGGGACCGGAAC 252917 30 100.0 36 .............................. GATTTCACCGACACTAGCCGGTAGGCGTTGATGAAA 252983 30 100.0 35 .............................. CACCTTACATCCGGTCAGGCACTCGCCTATTTTTA 253048 30 100.0 35 .............................. GCCGACTGTGCCGCCGCATTTGCTTCGTTTGCCGC 253113 30 100.0 37 .............................. CCGTTTGACCTTTATAATATTTTGGCTGTTATCAATG 253180 30 96.7 35 ................C............. CGGAGTCGGCCGCTTTCTCCACGCGTTTCCGCCCA 253245 29 73.3 0 ......G...CG.....A..A.-GC..... | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 96.2 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GTATGAAACGATCGATGGCAAAAAGAAAACGCATTTTTTCGGGCCGGACGACGACGTCTTTCCCCACCTCGTGGAGCTGAATTTCCGCCATAAATACGAAGCGTACTATGGCGTCGAGCCAGCAGAGAGATTGGTGATCCAGCCTGTCCATGTCCACCACCGTCATCGAGTGGTAACACGATTCAAAGATATGTATATTACGGGCTGGTTAGGCCATTATCGTCTTTCCTCTTCTCCCGAACAACTGACGTTTCTATACCACGTTGGCCTAGGCAGCCGCAATTCCCAAGGATTCGGCATGTTTCGGTTAATCAGCGAGTGAGCCATTCTGATTGTCGTCGACCTCCAATCGTGCAAAAACCCTAGGGGGTCGACGACATTGGTTTTGATCGCCTGATCCCTACAGCCATCATGGTTGAACTTGATTGACAGAATCTTCGAAACGTGTTATTCTGATGATGACGTTGAAGGGAAAAGGTTGATATGACAACACTTTTTGG # Right flank : CCCTCTTCAATGTCACGCCATCGTATGAACGTCTTCCGTTTGAAGAAACCGGATGGCTGCACTTCCCCGATCGACCGCTTCGTTTTGCTTCGGCTGCTCATTCTTGCGCCGCTTGCTTTGCAGGAAGCCGCTTTTTTGTTTCGCACATGGAGAACGTTTTGGCATCTGCTTTTTTTGTATGGCCCCATTGATCCACCAGGCATGGTTGTTCACCGCCTTTCTTTGCCGCTGCTGCATTTCCTCAGTCCGATGCGATATACTTGACATGGGAACAATCACGCTTCTTTCTCGTTCACCGTCGTGTCGGCGGACATGCTGCGTTGGCGTTGGACGGTTTGAAAGAAGGCGGAGAAAAGCGACGGGGGTGGGATGGATGCGCCGCAAGCTTCGCGATCTCGGTTTTTCCATCGGCACGCTTCCGGTGGGGAGACGCAATCAAATCACGGATGTGCCTGGGGTGCGGGTCGGTCATGTGACGATTCGTAAAGATGTCGATGAAC # Questionable array : NO Score: 9.07 # Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 5 1957447-1956140 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017071.1 Geobacillus thermoleovorans strain FJAT-2391 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================================================================================= ================== 1957446 30 100.0 38 .............................. CTGTAAATCATTCAAGTATGAAACGCCCCCAAAATTGA 1957378 30 100.0 36 .............................. ACAGCATCATTCAGGATATTCGAGAGGGGAAAGTAT 1957312 30 100.0 34 .............................. TCAAGTCAATACGTCACGATTGTGGTGGATGATC 1957248 30 100.0 39 .............................. AAAAATGTTTTTTGCCATATCAATCGCCAACTTCATTGA 1957179 30 100.0 35 .............................. GACGACGAGTTCCGCAAACGAGATGTGGAACTTGT 1957114 30 100.0 35 .............................. GCAATATCGCTAGCATTGAAGTCACCTTCTCCGAC 1957049 30 100.0 35 .............................. ATTGCTGCCCAACAAGCACGAACCGGTTGCCATTC 1956984 30 100.0 38 .............................. GTAACAGTTTCGCCGTTTTCTCCGGCAAGTCGGCTTCC 1956916 30 100.0 35 .............................. CAACAAATCGCCTACGGTCACGTCATCGGTCTTGA 1956851 30 100.0 39 .............................. CTCGCTTTCACATTGCGAGCGTCAAAATCCATTTTCACA 1956782 30 100.0 35 .............................. GTATTTTTGGAGCGTCGTAAATAACCCGCTCCCAC 1956717 30 100.0 34 .............................. ACCAAAAATGAACGGATTTCCACCGAGGAAAAGA 1956653 30 100.0 34 .............................. CTGTAGATGAAAACAGCGTGGACGTATGGCAAAG 1956589 30 100.0 39 .............................. CCTAATGTCCGATAACAGCCTACCAATCCCAATCCGTCA 1956520 30 100.0 38 .............................. ACGACGATCATTCAGGATTTGAAGCAAACCGCAAAAGA 1956452 30 100.0 121 .............................. AGTTGTGAATATGCGTCAAGGCCATTCCTGTGCATGGAGTGAATCCTTTGACACATAGTACGATGACTGGCTTTTCATAGAAGAAGAAACAAGAATGCTTCTTCTTTACGCCAAAATAAAG 1956301 30 100.0 35 .............................. TATGCAGAAACTCAGCGCATAAATCAGAGTGATTA 1956236 30 100.0 37 .............................. ATCTGTTCAACAGTTAAATCACGTGGTACAGGAATAC 1956169 30 86.7 0 ...............G..G....C....G. | ========== ====== ====== ====== ============================== ========================================================================================================================= ================== 19 30 99.3 41 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : CCAACCCGTCCCTTTCCGACGATATCGTCCGTGTCGCCCGTTCGCCGATCCGCAAGCTCGGGCCGAACGACCGGCTCATCGCTCCGGCGACGCAATACTGCACACTATTTGGCAGCGTTCCTGCTGGTCTCGCCAAAGGAATTGCCGCGCTGTTGCGCTTTGATGATGCGAGCGATGCAGAAGCCGCCGCTCTGCAACAAACGATCGCACACCACGGAATCGAAGGAGCGCTTCGGCAATACGCGGGGCTTGAGAGTGCGCACCCGCTTGTGGCCGCGGTGAGGGAAGAGTACGGGAGAATGGAGAAAAACAAAAGCTGACCGCCTTTCAAATGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAATATTTTTTTGCGTCAAAATCCTACAACCAACACGGCTCAACAGTATTGACAGAATTTTTGAAACGTGATATTCTGAAAACAGCCAAAAGGGGAAAAGCTTGATTTTATGCGAATGGTTTGG # Right flank : GCTATACAGTACGGTACAACTTTTTCTGTCCCCGATGCAGGATTTTCACCCCCTGCTTGCGAATGGATAGAATTGAACACGTTCAAAGAGGGGTGATGGAATGGCTATTGACCACGACCGGTTGTTTAAAGAACTGATCCAAACGTTCTTCGAAGAGTTTCTTCTCCTCTTTTTTCCCGACATGCATGAACACATTGATTTCAGCCATTTGTCCTTTCTGTCCGAAGAACTGTTTACCGATGTCACGGCAGGTGAAAAATACCGCGTCGATCTATTAGTCGAGACGAAGCTGAAAGGGGAGGATGGGCTGATCATCGTTCATGTGGAGAATCAAAGCTACGTGCAACCATCGTTTCCAGAGCGCATGTTTATCTATTTCAGCCGTTTGTTTGAAAAATACCGCACCCGCATCGTTCCGATCGCTGTCTTCAGCCATGACACCCTCCGCGAAGAACCGTCCGTGTTCTCAATCGAGTTTCCCTTTGGCGACGTGCTGCAGT # Questionable array : NO Score: 8.79 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:-0.42, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //