Array 1 609724-612201 **** Predicted by CRISPRDetect 2.4 *** >NZ_ACGK02000001.1 Fannyhessea vaginae DSM 15829 Contig27.fasta, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 609724 28 100.0 34 ............................ TCAGGATTATGTGATATTTCCTGCGCTAATTCTA 609786 28 100.0 33 ............................ CTAAAAAGCTTGGTTACGATGACGCAGAAGAGA 609847 28 100.0 34 ............................ TTGAAAAACAGTTAAAAGAAGATGATAGTGATGA 609909 28 100.0 33 ............................ CGAGATAATGCAATTTTGGGAACACTTTTTAGA 609970 28 100.0 33 ............................ CTTGCCTTCCCCGTACAAAGAGTCCATCTCATT 610031 28 100.0 33 ............................ TAATGAAAAATCTCTTTATAGAGTATGCAAAGA 610092 28 100.0 33 ............................ TAATATATGAGCATACACTCCCGATAAGTGGTA 610153 28 100.0 33 ............................ CGCACCAGCCTCTTTCGCGGCTGCCGTTGTAAC 610214 28 100.0 33 ............................ CAAAAGAGCCTGCAACAATTGCAAGCCCTGACG 610275 28 100.0 33 ............................ TACAGCTCCTCAAGACAATTTGCAGCATAATGC 610336 28 100.0 33 ............................ TTGAAAAATATCAGTTCGCTCTTAAAAAAATCC 610397 28 100.0 33 ............................ CAAGGTTATCGCAAACTACGATAGAGGCTGGGA 610458 28 100.0 33 ............................ CACGAACGGACACTATTGTGCGCGACAAGATAC 610519 28 100.0 33 ............................ TAAGTGGTATTCCCCACTGTATAAACGCGCTTA 610580 28 100.0 33 ............................ CCCATTTAGCGTCAAACCGAGCGCCATGTTTAA 610641 28 100.0 33 ............................ TTGCACCCAACACAGCTACAGCTACAGTGCCAA 610702 28 100.0 33 ............................ CTAAAAAGCTTGGTTACGATGACGCAGAAGAGA 610763 28 100.0 34 ............................ TTGAAAAACAGTTAAAAGAAGATGATAGTGATGA 610825 28 100.0 33 ............................ CGAGATAATGCAATTTTGGGAACACTTTTTAGA 610886 28 100.0 33 ............................ CTTGCCTTCCCCGTACAAAGAGTCCATCTCATT 610947 28 100.0 33 ............................ TAATGAAAAATCTCTTTATAGAGTATGCAAAGA 611008 28 100.0 34 ............................ TTGGGCGCGTGGTGAGATAGGCTATTCTCGTTGG 611070 28 100.0 34 ............................ CACCAAAATTTGATAACCTCGGAGCCAATGTAAA 611132 28 100.0 33 ............................ TAATATACACCTTGATAATCCTGTACATGCTCT 611193 28 100.0 33 ............................ CACAAAAAAAGGAGACATCTGCCGCGCTTTCGA 611254 28 100.0 33 ............................ CGCCTTTAGGTAGGCTTTCAGTCAAAGTCACAG 611315 28 100.0 33 ............................ TAAGCTTGCAAAAAATACCCTCAGACAAAAGAG 611376 28 100.0 33 ............................ TAAGCTTGCAAAAAATACCCTCAGACAAAAGAG 611437 28 100.0 33 ............................ CGGAGCGTCCCATTTGCCTTGTAGCTCATGTGC 611498 28 100.0 34 ............................ TTATATACCGCAACGTTTCGATTGTACACTAAAG 611560 28 96.4 33 ............C............... CGTATTATATAAGATATACGCAACAATTAATAA 611621 28 96.4 34 ............C............... CAAGCAAAATACTACCTTGACACCGTAAACGATG 611683 28 96.4 33 ............C............... TATTTCTGTCTACGCTGTTGTTTTCGTTCCACT 611744 28 100.0 33 ............................ CGAAAGCATGACGGTCGCAACGTTCGCACGTAT 611805 28 96.4 33 .....A...................... CGGCGTTGGCACGCAATTGTACAAGGAGATATT 611866 28 96.4 34 ..A......................... CGCTGGTATAGATGTAACAAAGGTTTCAAAGCTG 611928 28 96.4 34 ..A......................... TAAGTTCATCTGCGTCTTGTGCGCTAATAGGTGA 611990 28 96.4 34 ..A......................... TCGTGGAAAGCAGCGTGTAGGACGTGGGATATTC 612052 28 96.4 33 ..A......................... TTGGGCACGTGGCGAGATTGGATATTCACGTTG 612113 28 96.4 33 ..A......................... TGGTCATTCTGTCATTGAATTTGAGGTAAAAAG 612174 28 82.1 0 ..A...................G.G.GA | ========== ====== ====== ====== ============================ ================================== ================== 41 28 98.8 33 GTTTTTCCCGCATACGCGGGGGTGATCC # Left flank : AACAGACGACAAAATCATAGAAATAGGCGCAATTAGAATTTGCGACAAGCAGGTAGATGACTATCAGTGTTTAATTAAACGGGATTCATTGAATCTTTCCCCAGCTATAACCCAACTAACTGGGCTTACCGATATAGAGCTCGCCAATCGGGGAGTAAATCCTAACTTGGCTCTTAATGGGTTGAAACAGTTTATAGGACATTTGCCTGTTCTAGGTTATAACATTGCGTTTGATATGCGATTTATAAATAATGAGCTACGCTCTATGAACGAAGAGCTTCTTGATAACAGAGAAATTGATGTAATGAGATTTATTAAGAAAGAAAAGATGTTCTTAGAGAGTTATGCGCTTGATAATGTTCTTAAAGTGTATGGAATATCAGCTACTGTTCCGCACCGGGCGCTTGGAGATGCTAAACTGATAGCAAAGCTTGCATTAAAAGTGAATAAAATTCTTGATGTTCTCTAGTTAAAGCAGCTTTAAACAGGGATTTTTAAGA # Right flank : ACCCCATCAACCTTGAGGTACATGGCGGTGTAAACGTGATTTTTACGATTGGTGGATTCGTCAAGTGTAAAGTTGAACAAGCGCATCTCTACTGGTTTGTTATGACACTTGCAACGTATGTTGTTAGTGTGTCACCTTAAAGAAAGAGCTTGAGGCGGACGCACGTGCGCTCATACCACGCCTAAACGCTAAAGGAGAAATATTACTGAAGACGACGTAACGAACGTGTAGAAGCGTTTACAAAGAGCTGTATTACGCATTCGATTAACTAATTGGTTGGATAACGGTAACTACACAGGGAGTAACCACTAAAATAATCTTGTTGAAAAATGTTGCAAGGATAATTCGAACGGTAAAAAATTGATTGTGAACGTGAAACCGAAATATTACGTCATACCGTTTTAAAACGGTGGAATTCTTATTTATATGTTATATTGTATAAAACACTTTACGCTGTAAAGTAAATGCTATAAATAGAATGTTAAAAGAGGTAATTATGA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTCCCGCATACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTTCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.90,-9.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //