Array 1 31626-31764 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_RJFI01000020.1 Helicobacter pylori strain ZH35 20, whole genome shotgun sequence		Array_Orientation: Unconfirmed

  Position	Repeat	   %id	Spacer	Repeat_Sequence          	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	=========================	===================================	==================
     31626	    25	  96.0	    35	...........C.............	GTAACAGTGCAAGTTCAAGCTTTGATAATAGTAGT	
     31686	    25	 100.0	    29	.........................	ATGACAATGTTAGCTTTAATAACGACACC      	
     31740	    25	  96.0	     0	....................C....	|                                  	
==========	======	======	======	=========================	===================================	==================
         3	    25	  97.3	    32	TTCAATCAAGGGACTTATAATTTTA	                                   	       

# Left flank :   ATATTGAAAGCGGTTCTAATTCCCCAACGCACAACTCTTATTGCCTTTTTAGCAGCGCTCAAGGCTCTGGGACTTATTATTTGAACACCCTTACCACTTATAGCACTGGTGGGGCTAGTTTCACGCAAAAATTCAATGGCGGCACGCTTAATGTGGGAGGGAATATCCGCTTTGGAGGCACAGGTATTAATGGGGGTGATGTCGGCTATATCACAGGCACTTATGACGCTCAAACGATTAATTTTAATTCTAGCCATTTAACAACCGGAAACTCATACGCTGATGGCGGTGGGGCCACGCTCAATTTCAACGCGACTAACAATATCACTATCAATCAAGCGAGTTTTGATAACAGCGATGCAGGGACGCAAAAATCTTACATGAATTTTAAAGGCTCTCAAATTAATGTCAGTGGCTCTAGCTTTAAAGACGACACTGATGGGGGCTTTAATTTCAGCGGTAATAATAATCATAGCACTATCTCCTTTAATCAAACTAAC
# Right flank :  AATACCAGCAAGGTGAGTTTTTCAGGCACTAACACTTTAAACTCAAGTTCGCCTTTTGCTAGCCTTAAAGGCAGCGTGTCTTTTGGTTCTGGTGCGATTTTTAACCTCAATCAAACCCTTAATAGCAACCAAACCTATGACATTCTCACGACAAATGGGACCATTCAGTATGGGGTTTATCAAAGCTATTTGTGGGATTTGATCAACTATAAGGGCGATAAAGCCATCAGCCATGTTGGAGTGGGTAATAACACTTATGATGTAACCTTTGACATTAACGGGCAAGATGAAACTTTACAAGAAACCTTTAACAACCAATCCATTATTACCCAATTTTTAGGAGACGATTTACAACAACAAGCCCAAAAAACCTACCAACAAGACTTGAGCAACTCCCAGAGCGCTTTAAATAACGCTACTAGTGATAATAAGATCGCAAATAGCGATACAAGCTACACTCAAAGCAAAGATACTACTATCGCTAAAGACGCTCAAGGTTT

# Questionable array : NO	 Score: 2.53
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TTCAATCAAGGGACTTATAATTTTA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:76.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [1-1] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         NA [0,0   Confidence: NA] 

# Array family : NA
//