Array 1 1456124-1455692 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JH621344.1 Kingella kingae PYKK081 scaffold0001, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1456123	    36	  91.7	    30	AG.....C............................	GGAATTCAAGCTCATTTCACACTCGCAGCA	
   1456057	    36	 100.0	    30	....................................	GAAATTTTCGGATAGGTTTCAGTTAGAACA	
   1455991	    36	 100.0	    30	....................................	CAAGGGATTTTAACCGCGCCTTGACACCTA	
   1455925	    36	 100.0	    30	....................................	CACCGAGCTGATGAAATGGTGTGTACGCCG	
   1455859	    36	 100.0	    30	....................................	TGCAAACAAAACGATCGCAGTCGGTAATAA	
   1455793	    36	 100.0	    30	....................................	ACTCGTGGTGATGATAAGCTTTATGCTTAC	
   1455727	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
         7	    36	  98.8	    30	GTTGTAGTTCCCTTTCTCATTTCGCAATGCTACAAT	                              	       

# Left flank :   TCAGCAAAATTGGCGGAATTGATGGAGATGCCCGAAGACAAAATCCGCAAAATCATGAAAATCGCCAAAGAGCCGATTTCTATGGAAACGCCGATTGGCGATGACGATGATTCACACTTGGGCGATTTTATTGAAGATGTGAACAACGTTGCGCCAGCCGATGCAGCCATGTATTCGAGCTTGCGCGAAGTAACTTCCGATATTCTGGAAAGCCTAACGCCGCGTGAAGCCAAAGTGCTGCGTATGCGTTTTGGCATTGACATGAATACCGACCACACGTTGGAAGAAGTGGGCAAGCAGTTTGATGTAACGCGCGAGCGTATTCGTCAGATTGAAGCCAAAGCATTGCGTAAATTGCGCCACCCAACGCGCTCGGATAAATTGAAGAGCTTCTTGGATAGCGAAGAAGGCAAGTAAATCGTTGTAAATAAAGTGCAGGCTGCTTTTTCAGTAACACGAAAAGCAGTCTGCACTTTTTATTTAATTCAATTGAGTTTGAG
# Right flank :  ACCCCTGCCCGAAGCCCTGATAAATTCAAGGTTTCGGGCATTTTTTCACTTCAAAAAATCACGCTAAAACAGCAAAAATTGCTGTGCATTCACCCGTTTTTCTTGCGTTGGTTTATCGCCAAGCAGCACTTTCATCGCGACAAATTGCTTTTCCGTTACTTCCAAACAGCGTACCGAACCTTCTTTTGGCAGATTCGCGCAAAGCCGTTTGTGGTGTTTTTCCAACATATCTCGCCCACGTACAATCCGTGTATAAACCGATAATTGCAACCGAATGTAACCGTCTTTTACCAAAAAACGGCGAAAATCATTAGCCGCCTTGCGTTTGGCGCGACTGGTTACGGGTAAATCAAAAAAGACGATGATTCGCATAAATTGGTTCTCACTCATAGTTATGTTCTTTTAAAGACAATAATTCAGGCAGCGTCAATTTTTGTGCATCTTTTTCTTTCAAAGCAGCCTGCAAACTCGCTACCGAACGGTCTATCGCGCCCAATGTA

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGTTCCCTTTCTCATTTCGCAATGCTACAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         R [matched GTTGTAGTTCCCTTTCTCACTTCGCAATGCTACAAT with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.30,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.78,4.77   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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