Array 1 2105906-2104885 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP033878.1 Halorhabdus sp. CBA1104 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	==============================	=======================================	==================
   2105905	    30	 100.0	    36	..............................	TCCTGGGACGTCCTCTCGTTCATCGCTCGCAACGAT   	
   2105839	    30	 100.0	    35	..............................	ACACCGAGGACGGCAGCGACAAAGTGGTGGCCCGG    	
   2105774	    30	 100.0	    36	..............................	CGGCGGTTGGTCGTCGCCCAGCCACCCAGGCTCATT   	
   2105708	    30	 100.0	    35	..............................	AACGCAACAGTACCACATATCTAATTATTCTGAAG    	
   2105643	    30	 100.0	    36	..............................	CGTGGGCAGACCGCTACAAACTGGAGTCCAAGACTG   	
   2105577	    30	 100.0	    34	..............................	GACTTGTGCCGTGCCGATAGATTCTCTGGTTTCG     	
   2105513	    30	 100.0	    39	..............................	AGGATAGTTTTCAGCGGTCTCATGACGACCTGTTCGGTC	
   2105444	    30	 100.0	    36	..............................	GACCCAGACATCCACGAGTTCGTCGGCGACATCTTA   	
   2105378	    30	 100.0	    37	..............................	GACTTCACGCAAGTTGTTCTATTGACACCTGACCCGG  	
   2105311	    30	 100.0	    35	..............................	ATAGTATGGATATGGACGGCGAAACCATGTTCATG    	
   2105246	    30	 100.0	    35	..............................	GCCGGGCCGAGTGTCACACTCCCGCTTTTGTCGCT    	
   2105181	    30	 100.0	    38	..............................	CTCGTCGAGGTCGTCGAGATCGAATAGCATGGTCCCGT 	
   2105113	    30	 100.0	    36	..............................	ACGACCGACCGATCCCATCGTTTGCACCGGAGCCAC   	
   2105047	    30	 100.0	    36	..............................	GTCGGGAGTACTCGATCATATGATTGCAGTTGACGA   	
   2104981	    30	 100.0	    37	..............................	TCACCGTTTCAGTCACTTCATCCGACATTCGGTATGG  	
   2104914	    30	  90.0	     0	......................A...C.C.	|                                      	
==========	======	======	======	==============================	=======================================	==================
        16	    30	  99.4	    36	GTTTCAGACGGACCCTTGTGGGGTTGAAGC	                                       	       

# Left flank :   CGATCGGACGATCGAACACCCTCGCCTTAACCGAAAGGTGAGCTACCAGTATCTCCTTCGAGTCGAGGCATACAAACTCAAGAAACACCTGCTGACCGGCGAACCCTACGAATCCTTCGAGCGGTGGTGGTAACGTGGTGTACGTCGTCGCCGTCTACGATGTCGAGGCGGATCGAACGCGCCTCTTCTTGAATTTCCTGCGCCGGTATCTGACTCACGTCCAGAATTCGGTGTTCGAGGGAGAGATCACGGAAGGCGATCTCGAAGAGATCAAGCGAGAACTCGATTCGATGTTGGAGGCCGGTGAATCCGTAATCGTCTACCGGATGAGCTCCGAACAGTACGTCTCGCGGACGGTCTATGGCGAAGACCCGACGGACGACAGTCACTTTCTATAGTGTCGTCATCGACCCCCCGGGTTTGAGGGGCCATTGCGGGTCGACGAAAATACTAACTCCCAGGCGCAGGTATGACGCTCTATATGGTCGATTTCGGCCATG
# Right flank :  TTCACACGTCGTGTTTGTGCGGGCCACTGAGCGGTCGAGGGTGCTGAAACGAACTCGTGTCTTCGTCCAGGCCTACTGTTCCTGGTGCTGCCCCGAGCCACGTTCAAATACTAATATTCCTTAAAAGTGAGTCGTCTAGTTCTCTTTGGCGGCTTCGATCTCTTGGGTTGCTTCGAGGACGAGATCGTGTGCACCACCGTTCGAAGCGACCAGGCCCGTGCTGTCCGGTCCCCAGGCGTCGCCGTTCAGGTCTGTCACCGTCCCGCCGGCCCATTCGACCATCGCTGCACCGGCGATCGTGTCCCACGGGTTCGTTTCGAGATTCGTGATCGCGGCTTCGATCTCGCCGGCAGCGACGAGTGCGAGTGCCAGTTGTGTCGAGCCGACCCGCCGGAGATCACTGAAGCGCTCGACGACGGCACGCGCCGCGACGGCGAACTGCTCACGGCTGTCGAAGCCCCAGAAGTACGTCGGTGCGACCATGAACCCGCTCGGGTCGG

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTCAGACGGACCCTTGTGGGGTTGAAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-4.30,-6.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [41.7-50.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.28   Confidence: HIGH] 

# Array family : I-B [Matched known repeat from this family],   
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