Array 1 29284-25963 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFYQ01000067.1 Klebsiella pneumoniae strain AK_1023 AK-1023_NODE_7.ctg_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 29283 29 100.0 32 ............................. AAACCCCACTAGTCTTACCGTACTTGATTGCC 29222 29 100.0 32 ............................. GGGTTGCTGAAAATCTCGCATCACAGGCAAGC 29161 29 100.0 32 ............................. AACGTAACCTGATTCCAGTCTGCATTATAAAT 29100 29 100.0 32 ............................. GCCCGAACGCCGATACGAATTTATCCCGAGGA 29039 29 100.0 32 ............................. CCTAGCAGCTCTACGGCGTCTTTTTTGCCGCC 28978 29 100.0 33 ............................. CGCATAGTGACAATTGAGCACATTAGCGGCCAG 28916 29 100.0 32 ............................. ATAGCCGACAGTACGCCAATGCTGGTGGAGCC 28855 29 100.0 32 ............................. TTTTATGCTACTAAGAAATATATGACAAAATC 28794 29 100.0 32 ............................. GCGATTGGTGGACCAGTTTCCGCGGCGTTCCG 28733 29 100.0 32 ............................. TCAAAAAATGTTTACAGATTTAGCACCAGAAC 28672 29 100.0 32 ............................. GTTACTGACTATTCTGGTGGCACACCAAACTC 28611 29 100.0 32 ............................. TAATGCGGCGTCTCCGCATCGTTGAAAAAGTC 28550 29 100.0 32 ............................. CAGCCATTCAGCAGATCCCCACTCTCCGAAAG 28489 29 100.0 32 ............................. CCGATCGGCTTCCGTGCGCGCGGGCGGGATAT 28428 29 100.0 32 ............................. CGTTCCGGCGTGTAGGGCGGGTCGAGTTCCTT 28367 29 100.0 32 ............................. GGTTCTGGCTGATTTGACCTTCGACATTACAC 28306 29 100.0 32 ............................. TCAGGGATTTGCTAGGCTCTAATCCCGTGCGG 28245 29 100.0 32 ............................. CCTGCTTTTTTCATTTTTCGGTCAGGTTAAAT 28184 29 100.0 32 ............................. TTCGCCGGCGCATCGCCCAGGTGAGGGCGCGG 28123 29 100.0 32 ............................. ATAATCCCGGTTCAGTGAATAACGGGGATTTT 28062 29 100.0 32 ............................. GCGGACTTTACTGGAGATATACCGCGCCAGTA 28001 29 100.0 32 ............................. ACGGGTCTGACTCCAGAATCGCCGTAAATATC 27940 29 100.0 32 ............................. CAACCCACGGGGATCCGAAATCGCCTGCGGTG 27879 29 100.0 32 ............................. GCAGGCCTTGCATGAACTGATGACAGGCAAGC 27818 29 100.0 32 ............................. CGTGAGTTTATGGTTTCGGTTAGGGGAAATAA 27757 29 100.0 32 ............................. ACATTTTGGTGATCCGCATATGCGTTTCCCGG 27696 29 100.0 32 ............................. GCAACGTTCTCAGTCAACGATCGGTTGCTGCG 27635 29 100.0 32 ............................. TCCTGGGGTATCGTCGATGTACAGCATGTCGA 27574 29 100.0 32 ............................. ACCCATGGCATTGGCCACATTGGTCGTCCCCT 27513 29 100.0 32 ............................. TACGCTTTAAAAAATGGGCTGAGGGTTGTAGC 27452 29 100.0 32 ............................. GTCATTCAGTGCTACAACCCGTCCAGTCTGTC 27391 29 100.0 32 ............................. CAATTCCTGCCGGTGATTCCGCGGTCGGCAAC 27330 29 100.0 32 ............................. CCCGACAAAAGTCATTGAGCTTGTAAAGGCTG 27269 29 100.0 32 ............................. GCGTGCAGTTCTATAAGGATGGCGACGCGTTC 27208 29 100.0 32 ............................. AAAATGTGCGAGCTGTGGGATGACCTGAATGA 27147 29 100.0 32 ............................. AGACGCGGCAGAACCTGATCCCTCTCAGCCGG 27086 29 100.0 32 ............................. CTTTGCCCGGTGATAACAAAATCAGCAACTGC 27025 29 100.0 32 ............................. GAGATACCGTTTTAATTCAATACGGCGGCGGC 26964 29 100.0 32 ............................. GGCAAAAAACGGATCCGCCACGTGGAGTGGGA 26903 29 100.0 32 ............................. CACCAGGCCGCCGTCTTTGATGACGCGCATGT 26842 29 100.0 32 ............................. AGGATCGGGATTTTCCCGGCGTTCCATCGCTT 26781 29 100.0 32 ............................. CATCGGAGGTGATAAATGCAGACAATTATCCA 26720 29 100.0 32 ............................. TTCTGGCAGGTCGACGACGACAACAATCAGGT 26659 29 100.0 32 ............................. CGGCTGATCTGCGGCCGCCTGGATGTGTCCAA 26598 29 100.0 32 ............................. CGCACTTTCACGATGATCATGCGTGAGGCGGT 26537 29 100.0 32 ............................. GCGTTATATTTGTGAGTCGGTGCTGAGTCCAG 26476 29 100.0 32 ............................. CCAGAAGAGGAGGCAACGCTGGATCTTATAGC 26415 29 100.0 32 ............................. TGGTCAGGGCTGATTGCAATGGACCGGGCAAA 26354 29 100.0 32 ............................. CCGAGCCTGAGTTTTGTGAACGGCCCAGCCAG 26293 29 100.0 32 ............................. GGATTTCCATCTCCGGCGTCTGACTACGTTGA 26232 29 96.6 32 ..........A.................. ACGGTAATTATTTATGCCCTGGATAATATTGG 26171 29 96.6 32 .......T..................... TCTGACTGTCGAGGCATTATGTGCCCTCCGAT 26110 29 96.6 32 A............................ ACGGTCCGACAGAACGGCGCTGGAATCTCTCG 26049 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 25991 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 55 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGTTCTTGCGGCAGGCGAAATTCAGCCACCCCCGCCACCTGAAGGCGCACATCCTGTAGCTATCCCATTCCCTGTCTCTTTAGGTGATGCAGGCCATCGGAGTCGTTAACGATGAGTATGTTGGTTGTGGTGACAGAGAATGTTCCTCCGCGACTCCGTGGACGGTTAGCCGTCTGGTTGCTGGAGATTCGCGCTGGTGTGTATGTTGGGGACATCTCAACAAAGACACGAGAAATGATATGGCAACAGGTTTCCGTTCTGGCAGAAGAGGGGAATGTTGTTATGGCTTGGGCGACGAATACCGAATCCGGATTTGAGTTTCAGACATATGGTGTGAATAGACGTATTCCGGTGGATTTGGATGGACTGCGGTTAGTATCTTTCCTTCCTTTTTTAAAACAATGAGTTATATGCTCTTTAATAATGTAAAATTGTTTCTTAATTGTTGGTGAATTGTTTTTCAGTTAAAAGCTATTGATATTGAAGTCTATTTTTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTCTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //