Array 1 10031-10327 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LDVZ01000018.1 Haemophilus sp. C1 contig526, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
     10031	    32	 100.0	    35	................................	TATCGATATGGAATCTGAATTGCCAATCAATAAAT	
     10098	    31	  96.9	    35	...........-....................	TCGTTTAAAAGATATTAATACACAAATGCAACTTA	
     10164	    32	 100.0	    34	................................	CGCGATTTAAAACTCGCTCACACATACTGTTACT 	
     10230	    32	  93.8	    34	.....T.......A..................	ACCAAAGGCCAATATTCTCACTGCGAGATTGCCA 	
     10296	    32	  84.4	     0	..G.G.A....T.........C..........	|                                  	
==========	======	======	======	================================	===================================	==================
         5	    32	  95.0	    35	GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC	                                   	       

# Left flank :   TTGATGAGGTAAGTTATGTTAATGCTGATTACTTACGATATTTCTTTTGACGATCCAAACGGACAGGCGCGATTGCGCCGCATAGCAAAACATTGCTTAGATTACGGCGTGCGGGCGCAATATTCGGTATTTGAGTGCGATGTTACACCAGACCAATGGGTAACATTGAAAAATAAGTTATTAGAAACCTACGATCCTCAATGTGACAGCTTGCGTTTTTATCATTTAGGCAGCAAGTGGCGTAATAAAGTGGAACATCATGGCGCAAAACCGGCTGTTGATATATTTAAAGATGTACTTGTCATTTAGTTCGCTAACCTATTGTTCTCATTAAAACCCTGATAGGGTAGCGATCCTTATTTTCTTTAACAATTTGAATAAGTTAATCTATTTGTATAACGGCGGTATGACCGTTATACTTATTAAACTCCTTATCATAAAATCAGTTAGCGAAATACAGTGTTTAATACGCTGATTTTTCTTGCTTTTTTATGTAGGGA
# Right flank :  CTGTAATCACAATCAAGTTACCGTCATTAATATGGGCAGCTGCGTATTTAAGTAAGGATGAAAGAAGATAAAACGACTATGTCAGTAAATGGATAACTTAACATTTAAATACAAAAGAGCGGTCAAAATATAATGATTTTTGGCCGCTCTTGTTTATACGATTTGAATTCAACTAATTTAAAAGATTAACCTGCTCTAAAAATTCTTCTTCTGTTAATACTTTAATATTTAGTTCCTGCGCTTTGGCTAGTTTAGAGCCAGCTGCGTCACCTGCGATGACAAAGTCCGTTTTGCTGGAAACTGAGCCACTTACTTTTGCGCCTAGCTGTTGTAGTAATGCTTTTGCTTCGTTGCGACCCATTTGAGTGAGGGTGCCGGTGAGAACGACGGTTTTATCTTTGAATAAGTTTTCACTTGCTTCTTTTACTTCCACGGTTTCCCAATGTACGCCTTGTGCGAGTAAATCCTCAACAACGGCAACATTATGTGCTTCACGCCAG

# Questionable array : NO	 Score: 5.73
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,-4.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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