Array 1 1036-3623 **** Predicted by CRISPRDetect 2.4 *** >NZ_RBAE01000030.1 Klebsiella pneumoniae strain C1682 C1682_S5_L001_R1_001_contig_30, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1036 29 100.0 32 ............................. CTGCTGACGACGTGGATCCGCTGGAACGTCAC 1097 29 100.0 32 ............................. TACTGGCAACGGAATTCGGTTCGACGTTTATG 1158 29 100.0 32 ............................. CGCTCCCCAGGACAAACGCGGTCTCCGGATCC 1219 29 100.0 32 ............................. TTGCACGCACGTGAATAGTCCAGGCCGCCTGG 1280 29 100.0 32 ............................. TCCAGCGTGTGCATCTCGCCGATCTCTTTTTG 1341 29 100.0 32 ............................. TAGGGTATCCCGTTCTCATCCACGGCAATATG 1402 29 96.6 32 ............................T TGAACTGATCAAGGGGCGGCTTCAGGCAATTG 1463 29 100.0 32 ............................. AGTAACGAAACGGTCGCACTCAACCGCGCCGC 1524 29 100.0 32 ............................. TCTTGTTAGTGATTGAGTAGCCCATCTGGGAC 1585 29 100.0 32 ............................. CTACCCGTAAAAAAACCGCTGCCGCTGTCGCC 1646 29 100.0 32 ............................. CTCTTAATGGAATTCGTGAAGACGCTGGCCTT 1707 29 100.0 32 ............................. ATCTGGCGAGATTTTACGGGAAATAATATCCC 1768 29 100.0 32 ............................. GTTTTGACCGAGTATATCTGGCGGGATACCCC 1829 29 100.0 32 ............................. GTCCTGGCTGACCCGGACGAATTTGTTGTGAT 1890 29 100.0 32 ............................. GCGGTTTGCTATCAGATGAGCCTGTCATCAAA 1951 29 96.6 32 ............................T GCTGCACGATGTGATTGAGAGATGCCGGGAAG 2012 29 100.0 32 ............................. GGTTTATAGAGGCTGAGGTATTCACAATGCGC 2073 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 2134 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 2195 29 100.0 32 ............................. GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 2256 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 2317 29 100.0 32 ............................. AGCTGCGTGACGTTGAAAAAGATGGCTGCGGG 2378 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 2439 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 2500 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 2561 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 2622 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 2683 29 100.0 32 ............................. TCTTCGAGTTCAGGCCGGTATCCCACTCGCTC 2744 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 2805 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 2866 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 2927 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 2988 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 3049 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 3110 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 3171 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 3232 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 3293 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 3354 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 3415 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 3476 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 3537 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 3595 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 43 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCTTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCAACACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //