Array 1 4738265-4734636 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN813019.1 Halomonas sp. R57-5 chromosome I, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4738264 29 100.0 32 ............................. TATCCTTCCAGCCTGGAGTGGCTCCCTTTGCG 4738203 29 100.0 32 ............................. CCTGCCCATGAGCCTGAACGCCTGCAGCAGTT 4738142 29 100.0 32 ............................. CTGTTCGCGCGGATCCAGGAAGGCGAAGTGAA 4738081 29 100.0 32 ............................. TTTGAAGGGCGACCTGCAGGCGACGTCTGCAG 4738020 29 100.0 32 ............................. AACMGGAAGCCGCGATTATAACGGGCCGCTTT 4737959 29 100.0 32 ............................. CGAAACAACGTGACCGACGCCGTTGCGGGTTA 4737898 29 100.0 32 ............................. CGTTAGGGGTTTCCAGCGTCCAGTATTCGCGC 4737837 29 96.6 32 ............................A CTGCACACACTGCCCATGGAAGCGCTCAGCGC 4737776 29 100.0 32 ............................. ATGGCAATTTCAGCAATGCCGCCATCACGGGC 4737715 29 100.0 32 ............................. GCTAACTGATGCCAGAGATCACTAACTTTGAG 4737654 29 100.0 32 ............................. GTTGCCGCGCCTATCGCTATACCGTTTATTTC 4737593 29 100.0 32 ............................. ATAGAATTACTGGCGCTTGCTAGTGATTTCAC 4737532 29 100.0 32 ............................. CGGCCAGAAGGCACAGCGCGCAAGCGTTTCAA 4737471 29 100.0 32 ............................. CGTTATTTAACGCTGCCGTTAACGATGAATTC 4737410 29 100.0 32 ............................. ACGGAATGCGCCGCTACGCGGTGTTTAGCGAC 4737349 29 100.0 32 ............................. CCGCCGCTGCAGCCATGAAAATGATGATGCCT 4737288 29 100.0 32 ............................. GTTGTGTCGTGTTGGGTGCGGGCGTCTATCAT 4737227 29 100.0 32 ............................. GGTGCGTAGCGTTTTGATGGTGTGTTGGTCGA 4737166 29 100.0 32 ............................. ACGKCGTGCTAATGACCTTGATGGTCTGGTGT 4737105 29 100.0 32 ............................. TGCGCGATGAGTCCATCGAACCCCCGATGATC 4737044 29 100.0 32 ............................. CGCCAGCAATAGCAGCAACGAGCCGCCATAAA 4736983 29 100.0 32 ............................. CAAATTGTTGAGCGCCGCATCTTCATGAAGCG 4736922 29 100.0 32 ............................. TATTTCAGCCCGCGCTGGATATGGTTAAAAAG 4736861 29 100.0 32 ............................. CATCTGCCTGTGGGGAAATGCCTTTGTAGAAA 4736800 29 100.0 32 ............................. GCAAGTGGGCACGTGAAAGAAAGCTGATAACG 4736739 29 100.0 32 ............................. CGCGTTACGTGGCTGCGTCACCCTGCTAGCGG 4736678 29 100.0 33 ............................. TACTGAACGGCCTGCCCGAGAACTACCTCGGCG 4736616 29 100.0 32 ............................. AGTGACCGCTGCCGGRGAACCGCTGTCTAGCT 4736555 29 100.0 32 ............................. CAGCTCTTGCTCATTAGTGATTTGGGCTTTCA 4736494 29 100.0 32 ............................. CGGTGGTGCTTCTTCCGCGAGGCCTAGGCGTT 4736433 29 100.0 32 ............................. GCGAGGTGATCAATAAGGGTGATTTTGTGATC 4736372 29 100.0 32 ............................. CGTTAGCCCGGCAGCACAAGGCACATTCCAGA 4736311 29 100.0 32 ............................. CTGTTGCCGCCCGAGCTATGGCAATCATGGCC 4736250 29 100.0 32 ............................. AGTTCACGCCGGGCGGCATCCACTATCTGGAA 4736189 29 100.0 32 ............................. GCGGAGGAACTGATCCCATTGGCCCGCATTGG 4736128 29 100.0 32 ............................. CGTAACCAGGCCAACGGGCGCAGCGACCGGCT 4736067 29 100.0 32 ............................. TCACCATCACCCAAATCGGCTTCACCGCCKCC 4736006 29 100.0 32 ............................. TCGCCACCGCCATCGCCGCAGATTCTGCCGCC 4735945 29 100.0 32 ............................. CATCACTATCGCATTGAGCAGTACCAGTMCGC 4735884 29 100.0 32 ............................. GMGGCGGCATGGACGGCCCCATCGAAGTCGAC 4735823 29 100.0 32 ............................. TATTCTTACACTTTCTCACGCTGGTCTAATGG 4735762 29 100.0 32 ............................. TGGGCGCTCGGRGTTCAGAAACTGGGTGTTGY 4735701 29 96.6 32 ..............M.............. TATATGGTCATTATCATTACCGATGAAAACGA 4735640 29 100.0 32 ............................. TCTTTGGAGTAGGACGRATTGAGGATGCGCAC 4735579 29 100.0 32 ............................. CAATGTGTTTATTTCCAGTATGCCGGGTCAAA 4735518 29 100.0 32 ............................. CCTGACCATTGGAGCGTGTCAGTAAGACAGCT 4735457 29 96.6 32 ...................A......... ATGGCGAACAGGTCGCGTACGGGTGAGTGCTT 4735396 29 100.0 32 ............................. GATGGGCGGCCGCCTTCTGGGCCCGAGGGTAT 4735335 29 100.0 32 ............................. GCGCCATGGGGGTGCTGGGTTCAGCGGTTGAT 4735274 29 100.0 32 ............................. CGATGAGCAAAGTGCTTTAGCGTCGAGCCTGG 4735213 29 100.0 32 ............................. CATCTAGCCGTGCCCATGGAATATGGGTGTCA 4735152 29 96.6 32 ..............R.............. CGCCCACGCCACCACCTGAACCCCGCTCGCCC 4735091 29 100.0 32 ............................. ATCGATGGCGCGGTAGCGCTAATCATGGCCAT 4735030 29 96.6 32 .T........................... ATCGATGGCGCGGTAGCGCTAATCATGGCCAT 4734969 29 96.6 32 .T........................... GTTCTTTTGTGCGATTCCGGTGCGCAAATTAT 4734908 29 93.1 32 ............A.....A.......... CCCACGTCGGCATCAAGTCAGGCCTAACCGTC 4734847 29 100.0 32 ............................. AATCTGGAGCGCTGGCGAGGGATTGCMGAGCG 4734786 29 100.0 32 ............................. CTGGGCGCAGCACCAAGCGCCAAACCAAGCAA 4734725 29 100.0 32 ............................. GCAGAAACGCCCGCCGCCTACGTGTATCTGGC 4734664 29 96.6 0 ...........................T. | ========== ====== ====== ====== ============================= ================================= ================== 60 29 99.5 32 CCGATCCCCGCGCCTGCGGGGATGAACCG # Left flank : GGCGATATACAGCCGCCACCGCCAGCACCCGACGCGGTTCCACCTGCCATTCCAGAACCACCATCGGTCGGCAATGCCGGGCACAGGAGCGGATAAATGGCGATGCTCGTGGTAATTACAGAAGCTGTGCCGCCGCGCCTGCGTGGCAGGTTAGCGGTATGGCTATTAGAAATCAGAGCAGGTGTCTACGTTGGCGATGTTAGCAGGCGTATTCGTGAAATGATTTGGGAACAGGTCGAGGCCCTAGCCGAAGATGGCAACGTGGCAATGGCCTGGGCCAGCAACCATGAATCCGGTTTTGAATTCCAAACCTATGGAGAAAACCGCCGCGAACCCGTCGACCATGACGGGTTACGTTTGGTGCGCTTTTTACCGCCACAAGTTAACTAGCTGATTTTATTGGATCTTTAAAAATTTAAGATGGTTAAAAAGTAAGCAAAATAGCTGGTAGAATTTTTATCTGCTATTTTCTTCTTGTAGATCAACTGTCTACGACAAGT # Right flank : ATAATGGGTTGGTTTGCCAGTTGCCACCGKCGCCGATCCTCGCGCCTGCGGGGATGAACCGCCGATCATCACGCCGCAAATCATTCAGGAAGACCGATCCCCGTGCCTGTGGGGATGAGCCGATCCATGGCTATGAGGCGATAGGTGACAACTTCCGATCCCTGCACGGGCGGGGATGAACCGAGATTGCTTTCGAGAAAGTGCATCGCGATTATCCGCTCCCCGCACGAGCGGGGATGAACCGAGGTGTTCGTAATGGCTGAATTAGCAGGCAATCCGATCCCCGCGCTTATAGGGATGAGCTGCTCATGTGGCGAAAGAACCTCATTGAGATAGATGGTCGTGGTTAGACCTGAGATATGTGCCCGTGGCACCGCTGCGCGGTGCTTTCGCGGGTGCGCCTTAGGCTTACCACGCGCTACTCGAAAGTGCATGATCCGTCATGTGTGGCAAAGTCGGTGTTGCCATATAGGCAGTTCATAAAGCTTTGCCAGCGGCGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGATCCCCGCGCCTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCTGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //