Array 1 296-2004 **** Predicted by CRISPRDetect 2.4 *** >NZ_UXFF01000023.1 Flavobacterium psychrophilum isolate 43-SE552_S2_R1.fastq.gz, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 296 46 69.6 29 TAAT.T....A.ACC...CGGGT....................... TTTTGTTTTCGTCAAATTCCCCATTTGTG 371 46 100.0 30 .............................................. ATTAATGCGCTAATTATCGAAGGTAGGACT 447 46 100.0 30 .............................................. AGGACAATAATAAATTTATGCTAAATATTA 523 46 100.0 30 .............................................. AGCGATGGAAAATGCGCACGAGCTTACGCT 599 46 100.0 30 .............................................. AGATATATCTAATACTAGAGCGTACGACAG 675 46 100.0 30 .............................................. AAAAACAATATCGAAAAACTGAAAGAGAAT 751 46 100.0 30 .............................................. ATTTAATGTAATTGTACCCGAACCAGCTCC 827 46 100.0 30 .............................................. TATATCCGTGTTTGAATACACATTGCCACC 903 46 100.0 29 .............................................. CGTTTTCGCACGTGAAATCAAAGTACTAT 978 46 95.7 30 ..........T............G...................... TTTTAAAAAATGGTTAAGTAGGAAAACTTA 1054 46 100.0 29 .............................................. TCAGTAAGCGTGATGTCGTATATCAAAGT 1129 46 100.0 30 .............................................. AGCCAATGCCTTGTGTCCTGTTATGCGTTC 1205 46 100.0 29 .............................................. AAAAGAAATACAACAGCGACGATTGTTTC 1280 46 97.8 29 ............................C................. AGGCACTTGTTACTTAAAGTAAGTCTATT 1355 46 100.0 29 .............................................. TAATAAGTTGCCGTTGCCGTATATTCCGT 1430 46 100.0 29 .............................................. AGTAGGTAATGTATTCACAATAACACATT 1505 46 100.0 29 .............................................. AAAACGAAATACATACAGCGCACGCATTC 1580 46 97.8 30 ............................C................. AGGCACTTCTTTAGACTTAAATAAGTCTTT 1656 46 100.0 29 .............................................. AGTAATAGATGGGGGGTTTGAATGCCGTA 1731 46 100.0 30 .............................................. TCATCATCTGATGAAAATTGCTGTTCAATA 1807 46 100.0 30 .............................................. AAGCAAAATAAAATAAAAGAAATATTTAGC 1883 46 100.0 30 .............................................. ACCAAAGTTTAGGACAGCCCGAAGGCTTCG 1959 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 23 46 98.3 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : TTTTTCGACTTCCCGCTAGAAATTCGAAAAATAATCTATACTACAACTTTAATAGAAAATTTAAATGGAAAAATTAGAAAATACACTAAAAATAAAATGTCATTCCCTACTGATGATGCGGTTCTAAAATCAGTTTATTTAGCTTTAAAAGAAGCAACAAAAAAATGGTCAATGCCAATACAAAATTGGGGTATTGTTTTAAATCAATTTAATCTTATATTTGACAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACTTTGCGGGATAGTGTCATCAAAT # Right flank : CATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTATGTACTTCGGCATTTTCTCTGCTGGCACAAAATCGTATATAGATCGAAAACTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTAGGTAAGTCAAAAAAAACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //