Array 1 1060-3830 **** Predicted by CRISPRDetect 2.4 *** >NZ_SUNM02000015.1 Klebsiella pneumoniae strain AS009117 AS009117-illumina-1_15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1060 29 100.0 32 ............................. CTGCTGACGACGTGGATCCGCTGGAACGTCAC 1121 29 100.0 32 ............................. TACTGGCAACGGAATTCGGTTCGACGTTTATG 1182 29 100.0 32 ............................. CGCTCCCCAGGACAAACGCGGTCTCCGGATCC 1243 29 100.0 32 ............................. TTGCACGCACGTGAATAGTCCAGGCCGCCTGG 1304 29 100.0 32 ............................. TAGGGTATCCCGTTCTCATCCACGGCAATATG 1365 29 96.6 32 ............................T TGAACTGATCAAGGGGCGGCTTCAGGCAATTG 1426 29 100.0 32 ............................. AGTAACGAAACGGTCGCACTCAACCGCGCCGC 1487 29 100.0 32 ............................. TCTTGTTAGTGATTGAGTAGCCCATCTGGGAC 1548 29 100.0 32 ............................. CTACCCGTAAAAAAACCGCTGCCGCTGTCGCC 1609 29 100.0 32 ............................. CTCTTAATGGAATTCGTGAAGACGCTGGCCTT 1670 29 100.0 32 ............................. ATCTGGCGAGATTTTACGGGAAATAATATCCC 1731 29 100.0 32 ............................. GTTTTGACCGAGTATATCTGGCGGGATACCCC 1792 29 100.0 32 ............................. GTCCTGGCTGACCCGGACGAATTTGTTGTGAT 1853 29 100.0 32 ............................. GTCCTGGCTGACCCGGACGAATTTGTTGTGAT 1914 29 100.0 32 ............................. CATCCCCTGCAACCTGTTCAAAATGTGCAGCA 1975 29 100.0 32 ............................. GCGGTTTGCTATCAGATGAGCCTGTCATCAAA 2036 29 96.6 32 ............................T GGCACCCCATCATCTCCCATCGTCACCTTTAC 2097 29 100.0 32 ............................. ACGCGGGAAAACCACTGCGATCCCTCATCGCT 2158 29 100.0 32 ............................. CAGCTGGCCGTTTTGATATGGACGACGCGCAA 2219 29 100.0 32 ............................. TGCCAGCCAGCTTTGCGCGCCTGCTGAGATAT 2280 29 100.0 32 ............................. CAGGTGAAGTTATGCCGCGAAACTCAGATATC 2341 29 100.0 32 ............................. CACGGTTTTCAGGAATTTAACGAGAACCAGGC 2402 29 100.0 32 ............................. CGCAGGCGTGTGCCGTCAATGTCGGCGCCATA 2463 29 100.0 32 ............................. CATATTAAACTCATTGTTGCCGGCGCAGAATT 2524 29 100.0 32 ............................. CATTTTATGGCTGTTCAAAATTGGCTATAGTG 2585 29 100.0 32 ............................. CCAAACTCTTTCATCGCGGCTGTAATATGCGG 2646 29 100.0 32 ............................. GTTCGATCTCCGCATAGAGTGCGGTTCGACCA 2707 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 2768 29 100.0 32 ............................. GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 2829 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 2890 29 100.0 32 ............................. AGCTGCGTGACGTTGAAAAAGATGGCTGCGGG 2951 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 3012 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 3073 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 3134 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 3195 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 3256 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 3317 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 3378 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 3439 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 3500 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 3561 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 3622 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 3683 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 3744 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 3802 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 46 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCTTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGTGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //