Array 1 75955-77246 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWMX020000022.1 Escherichia sp. 93.1447 MOD1-EC7292_22_length_85970_cov_58.8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 75955 28 100.0 33 ............................ ATCTGGAGGCGGTTACTCTGTCCGCGTCCACGA 76016 28 100.0 32 ............................ TCCGCGCTTGTTATAATCCACATCAAGATCGA 76076 28 100.0 32 ............................ AATAGGGCTGAGCAAAGCCTCCAAGCTGTCCA 76136 28 100.0 32 ............................ GTTGTGCCCCAAGTCTGAAGGGGCGTTATGTT 76196 28 100.0 32 ............................ CCATCCTGATGATGGATGTGGCACAGGGGAAT 76256 28 100.0 32 ............................ ACGATGTGATAAAACTCATTACTCCCTGTGCA 76316 28 100.0 32 ............................ ACTTGTTCAGCTCACATAAAGCTGGCGAGCCG 76376 28 100.0 32 ............................ AGCATCCTGTGCCACTGACGCCATCGTTTCAG 76436 28 100.0 32 ............................ AGCAACAAAAAACCTGATGACCGGATGACACA 76496 28 100.0 32 ............................ GCGCCACCCAGGTGGCCCGACACCGATTGAAT 76556 28 100.0 32 ............................ CACATATCTGATTAAATATCACGACACGGCGA 76616 28 100.0 33 ............................ ACTTCCATGTGGCGGTTTTGCCACATCCATAGT 76677 28 100.0 32 ............................ ATCATAAGCAGGTGTTACGCGTCTCCTACAAA 76737 28 100.0 32 ............................ ACTGCTGGCCCGACTGTAGACGGGCGGGAAAT 76797 28 100.0 32 ............................ ATTTCATTGATAAAGGAGTTATAGGCGACTTC 76857 28 100.0 32 ............................ GAAATGATGAGTCGAGGACGGCGACATCATCA 76917 28 100.0 32 ............................ ACGGGCGCGGCGGCAGAGTGTCCGATTAAATA 76977 28 100.0 32 ............................ AGTTCTCGACTGATGCAACTCATTGCCCCCTC 77037 28 100.0 33 ............................ GACAGCAAATCACCGCGTAACCAGATTTGACGA 77098 28 100.0 32 ............................ TGTACCAGCACTTGTCGCAGCGGGTGCTACGG 77158 28 100.0 32 ............................ GCACTTATGGCGAGTAACAAAGGTTGAAATGT 77218 28 92.9 0 ....................T...C... | C [77241] ========== ====== ====== ====== ============================ ================================= ================== 22 28 99.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GAGTTGCAGGTTCAACTGGATCAGAAAGGTGTTTCTCTGGAAGTGAGCCAGGAAGCACGTAACTGGCTGGCTGAGAAAGGTTACGACCGGGCAATGGGCGCACGTCCGATGGCTCGCGTCATCCAGGACAACCTGAAGAAACCGCTCGCTAACGAACTGCTGTTTGGCTCGCTGGTGGATGGCGGTCAGGTCACTGTTGCGCTGGATAAAGAGAAAAATGAGCTGACCTACGGGTTCCAGAGTGCACAAAAGCACAAAGCGGAAGCAGCGCATTAATCTGGGGTCGTGAAGCCTTTTAAGTAGGTTGATAAAGTCCGTAATCTCGTAAGAGGTTACGGATTTTTTTGTTTGTGAGGTGGGGCGGTAAAAACCCTATTTTTGAGGGCGAAGGTAAGTTATTGATAATTAATGCTGCTGGAAGGCAAGGATAAAAAAGGGGCTGGACAAGGAATTTTGCTGGTTTCGCTTTATTAACAATGGGCTAAGCGTGTAGTATTTGA # Right flank : ATACGATGATGGCAGAAATTTAGCTGCGTTATGGCGCTCTCAACTCCGAACCATTAGCTGTGACACACAATAACAATTGTGATAATTGCGACGAGAATCAATTTCTCACACAGAAATCAATGCTGTACTAATCCTAACTCCTTCAAATAAAAATAATCACAGGATGTGTTTATGTCTTCAAATTACCTTACTCCTTCTGATCTCAAAACCATTCTCCACTCCAGGCGTGCCAATATTTATTATCTGGAAAAATGCCGGGTGCAGGTGAATGGTGGGCGAGTGGAGTATGTCACCAGTGAAGGCAAGGGGTCGTATTACTGGAATATCCCCATTGCGAATACCACGGCGTTGATGTTGGGGATGGGAACGTCCGTTACCCAGGCGGCGATGCGTGAATTTGCCCATGCTGGAGTGATGGTGGGTTTTTGTGGTACGGATGGCACGCCGCTGTATTCGGCAAATGAAGTTGATGTTGATGTCTCCTGGCTCAGTCCGCAAAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 59054-58725 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWMX020000028.1 Escherichia sp. 93.1447 MOD1-EC7292_28_length_64626_cov_63.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 59053 28 100.0 32 ............................ AGATCCAGATTTTTATCACGCGATTTCAGAGA 58993 28 100.0 32 ............................ AATAGGGCTGAGCAAAGCCTCCAAGCTGTCCA 58933 28 100.0 32 ............................ CAGCGCTGGCGGTGGATGATGCGGGGTAAGTT 58873 28 100.0 32 ............................ TGAACGGCACATTTTTGCGCCTCTGGTAGAAC 58813 28 100.0 33 ............................ TAAACAGCAACTACTTTAAGATTGAAATATTAC 58752 28 89.3 0 ....................T..TT... | ========== ====== ====== ====== ============================ ================================= ================== 6 28 98.2 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGTGTTTTTTATTTAAGGCGCATTAATGCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAAGATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTTTTGCTGCCTTACTACATGGGGGCAACGGGGCGCTACTATAGGGAGTTGGAGCAAAACGGTCAAGAAGAATTTATTTAGATTGATTTGTTTGGTTACGCAATGAACACACGATTCATTCGCCCGAGATTATGGTCGTATGCGTTCTGATCAATTGTTTATCAAAAGCTACGAGGGAAATATGAGAGTGAAGAAATACCAATCGACCCATTTTTTTAGAGTGACATGTAACTCATTGATTTTGTTTATTACTATTTTGACGTCTCGAAAAAGGGTATGAACCTATGATTTTGTGATTTTTAACAGTAAATCAATCGGATAGTCTGCTATTATTTCA # Right flank : ATCCACACCCCAATATTTATTTTCTTCCTTAATCCCGGGCGCAAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCGTCAGGCGGCAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAGGATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGTGCAGTAACCACGTGACCGTTTTCTAACTCTACGCGGAACATGGTGTTAGGTAACGTTTCAAGAACAGTACCTTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCGTAATTTGAACCGGCAAGATAATGCCGAAGTTCTGTAAATAAGTAAAGATTTGCGCGCTAAATCGCAACAAACAGGTTTGGCACATAACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAACGGTGAGATAAA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //