Array 1 174-2814 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNGG01000022.1 Fervidobacterium sp. 2310opik-2 contig_3, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================= ================== 174 36 100.0 41 .................................... CGCCTAACCAGTAGTCACAACCGTCACATAGTCACGCAGTC 251 36 100.0 35 .................................... CGAATATCTAGCGGATGAACCGCTAGTTACAGTTA 322 36 100.0 40 .................................... AAGGGAAAAAGATTTTTTATTCGAAGGTTTTCAGAATGAT 398 36 100.0 45 .................................... AATTCAACACTGTGGAAGAAGCAATGTACTACTACGTCCTCAAAA 479 36 100.0 40 .................................... CAAGGAATTGACTTCACAACACTCTTCGATTCTGTTAGAA 555 36 100.0 42 .................................... CGTTATATTATGCAGTTAAAGTTGGTAGGAAGCCTGGTATAT 633 36 100.0 41 .................................... AGATATGTCAGAGAAGACCCACAGTACGAGGACTACTTCAT 710 36 100.0 41 .................................... ACCAAGAGCTTGAGAAACTCCTCAAGCTCTTGATCCAGCTT 787 36 100.0 41 .................................... GGATCGCCCTCCAGAGGCTGGCGAAAGCCAGCCTCACGGAC 864 36 100.0 40 .................................... GATCGTACACTTTTATTAGATCTCGTCAGGACTGCCCTGA 940 36 100.0 41 .................................... GGTTTCACTTCTGCGATTGGGCATCAAGGAACGGCCGAACT 1017 36 100.0 39 .................................... CATAGTCAAACTAAAGATAATAGAGTAAAAAAGAAACAT 1092 36 100.0 40 .................................... AGTTACCGTAATGATATTGATTTAGTTTGAGTGAGTGATA 1168 36 100.0 42 .................................... AATATATGGAAACAGTGCATTGATGTAAAACCTAGTATGCGT 1246 36 100.0 40 .................................... AACACCACCCAGCCGAAAAATTTTATTAGCATTTTCCGAA 1322 36 100.0 40 .................................... AACACCACCCAGCCGAAAAATTTTATTAGCATTTTCCGAA 1398 36 100.0 40 .................................... AACACCACCCAGCCGAAAAATTTTATTAGCATTTTCCGAA 1474 36 100.0 39 .................................... GAACAAGTAAGTAGCGGGGCGAAAGCCCCATTTTTTTGG 1549 36 100.0 41 .................................... ATAGGCAAATCAAACACCTTTCATTTCTAGTTTTTTTCTCC 1626 36 100.0 40 .................................... TGTGTTCGACGGAGAAACAAAAGTGCTACACGTTTCGATG 1702 36 100.0 40 .................................... TCCTTGAAAGGTTTTTTAACGTTGCAATAGTCGATGCAGT 1778 36 100.0 41 .................................... ATTCCAACAAGAAGTAGTGGGGCGCGTAAGCCCCTTTTTTT 1855 36 100.0 41 .................................... TTTTAGAGGGTATTGAAAGCGTTATTTCAGACGGCGAGTGT 1932 36 100.0 43 .................................... AATACGTCAAAGAACTTGAAGAAGAATTTGACGCAGTAGAAAT 2011 36 100.0 40 .................................... GGTTTACATCGTTGTCTGCGAAAGAACAGCAATTAATATT 2087 36 100.0 41 .................................... AATTCCGACAAGAAGTAATGGGGCGAAAGCCCCATTTTTTT 2164 36 100.0 41 .................................... TTTGGGGCACATCGTCGGGATGGTGGGAACTCCACACGTAA 2241 36 100.0 41 .................................... AATTCCAACAAGAAGTAGTGGGGCGCGTAAGCCCCCATTTT 2318 36 100.0 43 .................................... AGGATTGTTGTTTGTGGTGTTGCCAAACGAGTTAAAGCCTTTT 2397 36 100.0 41 .................................... ATGTTTGACAAGATGGTATATTTTGCAAACACGTTTGACAA 2474 36 100.0 40 .................................... ATAGGTCGTTTTTAATCGATCTCGTCAGGACCGCCTTAAA 2550 36 100.0 41 .................................... GAAAATTCGAGAGGGAAGTTGAGCTCGAATTCGAGGTGCCA 2627 36 100.0 40 .................................... AAAGAAAAAGTAAGAAATGCAATACTTTACATCATTAAAT 2703 36 100.0 40 .................................... TAGTTACAAAGAAAATAAACAGAGAAATACTCACACACGT 2779 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================= ================== 35 36 100.0 41 GTTTCCATCTCTTTCAGAGAGTAGTTCCTTCCTAAG # Left flank : GGGGGTGTCCCCTATTTAAGAAGATAATATGATTTTTGAAATTTATCAATACCTTTGGTTAACAAAATCGATGTATTTAAAGGAGGGGGATATAGTCTGAGAAGGTATAGTATAAGAAAAATGGGGATAATTACTAATCACTTGAAGAGGGATAATGAGGTTTGAGTAGTAATG # Right flank : GAGTTACCTTCCAAAATATGCATAAATTCTATTATCTTGGAATGCGATTTTCCCTACCTCAAAAGTTTGATTGTCTAAAAAATTTTTAGTTTGACTAATTTTGCTTTTATCTTCTTTATTCATGCCGATTCCCAACCTATTTTTTAGCTTGTTACCACTTAAATTACCATGAATACTTGCTTGGTTCAATCTCTTCACAATCGAAATATGGTTGTAACAATAGGTAAGGAAACGGTATTTCGTAATGCTAACATTCTAAGATATTTCTTTATTTATGCGTTTTTCTGAATTTTAGCCAAGCTAAAAAGTTGAGAGGATCAATTATTTATGCCGATTTTGGATTGATTGAGTTTTTAGTGCTGTTCAAAAATGATTTTATTTAAATGCAATTAAGATTATTGCGAATGATTATCAACACTTTATGGGAGTTTTTGATTTTTTGGTGTTCTTTGATTAAATTATACCATATTTTCTTCTTTTTTTGTCAATAAAATTCCTGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATCTCTTTCAGAGAGTAGTTCCTTCCTAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.40,-3.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 102-1833 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNGG01000029.1 Fervidobacterium sp. 2310opik-2 contig_9, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 102 29 100.0 37 ............................. GAAATTTTACGTTAACTCTTTGTTACATTAAGTGTAC 168 29 100.0 38 ............................. TTGAACTTGAAGCAAACAGCAAAGATTTGATGATTCCT 235 29 100.0 36 ............................. TAGAATTTCAGAATTTGCTTGACAAGTATATAATGC 300 29 100.0 36 ............................. ATAGGAGGGTAATACAAAATAAAACGGAGGTCGATT 365 29 100.0 37 ............................. TATTGCGCAATCAGACCAAGTTGAGCGTGTGTTATAA 431 29 100.0 37 ............................. TACAATTAATCCTAGCGTACAAGGTGAAACCATATAC 497 29 100.0 35 ............................. ACGATAGACGGAAAGAATAACTGTACTTGCACCAA 561 29 100.0 36 ............................. GCTTTCGTGGTATACTATATGTGATGCATCACGAAT 626 29 100.0 36 ............................. CGAAATTATGGTAACAGTAAACGGTGTAAACAAAAA 691 29 100.0 38 ............................. TATATAAAGATACTTCAAAAATCAACAGACCGTTGCGA 758 29 100.0 35 ............................. TTGAGAAGTTCGAAGGCTTTACTAAGTTACTTCAA 822 29 100.0 37 ............................. AATGAGTTCCTTATCCATACCTAATACCTCCTTTAAT 888 29 100.0 36 ............................. TGGTAACATGTTAATGTTTGTTTCATCTAGTATGAA 953 29 100.0 37 ............................. TGGAGCATCTCATTGGCATCTACCAACAGTATCTCGA 1019 29 100.0 37 ............................. TTTGAACTCCTGAACTGCATACTTGAAGCCAATATCT 1085 29 100.0 35 ............................. TACGTTGGAGACAGTTTCGAACTGTTTTCAGCGGA 1149 29 100.0 36 ............................. TCATGATGACGAAATCGCGGAAGAGCAACGAGTATT 1214 29 100.0 38 ............................. TTGACGAGGCTCTGTGCCACGGTTTAAATAGAAACACA 1281 29 100.0 36 ............................. TTGGATGTGTGTTTAACATTTGCTCGAAAAGTTCAA 1346 29 100.0 36 ............................. CAATATATCACGTTTTCAATCGTACATTTTACATCT 1411 29 100.0 36 ............................. AAGAACTCAAACAAGACTTAACCAAGACTCTTGCAA 1476 29 100.0 38 ............................. TTTTCAGCCTTTTTTGACACAATAAGCCCGAAAAATTC 1543 29 100.0 36 ............................. TGGAGGTGTTTGGTATGAGAATTAGTGAACTTAAAA 1608 29 100.0 37 ............................. ATACAAATACCACGTCTGGTAATTTATTATCTGTTTA 1674 29 100.0 37 ............................. GAGAAGTACGAAACGAGTGTTTCGTGCTTGAAACCGT 1740 29 100.0 36 ............................. TGAAGCTTCAACGGTTACAGGAACAGTCTGACCAGT 1805 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 27 29 100.0 37 CTTTACATTCCTCATAGTTCAGATAAAAC # Left flank : TGAAATATTAAGTTATTGAAAGTCAAAGTGTTGACTAGGTTTTTTATTTTTCTATTTTTTCTCCTCTTGACTTATTACCGGAAATCTTATGCATGTTGAATC # Right flank : CCCACATCAGTAAAAGAGAAAAAGTTTAGAGGATATTTATAATTAAAGTTAATTTTAAAATTGCTTAAAAAGAATATATTTTGCAGCAAAGTATTGATTTAGATTTAGTATTTTTTTGATGAATAATTTATTTTTCTAGATTTTATCAATATTTTACTGTTGCATAGTCTAAAATGAGGTTCGCTGCAAAATTGATTATATTGTTATAATTACAATATTATGGAGTCATAATTCTTTTCTTGCCCCAATATTTTCTTGTTGCAAGCATTTTTAAATTCAATCTCATAAAAATATATTGAATCCTCGTCTTTTTCTATTACTGAGAGCAGTTCTCGTTTACATTTTTCTAACTTTCCAAATGTGATTTCACCTTCGAAAACAGAGTTTTGTACCCAGATAAAGTATTTTTTCAATATCTTTCTTACCTTGTTTACTCTTTTTTCATTAACATCGTAAGTAACTATCAAAAATATACTTAACCACTCCTTTGAAAAAATATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTACATTCCTCATAGTTCAGATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 235-1640 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNGG01000005.1 Fervidobacterium sp. 2310opik-2 contig_13, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 235 29 100.0 40 ............................. GTCTGCTTGTCCGTGTAATTCTCAACAAATTCAGCTGAGA 304 29 100.0 36 ............................. GCAAGTGGCATTACTTTAAGTGGCGTGACAATCAAA 369 29 100.0 36 ............................. AAATACGTCTTTTGTTTCGTTGTACTTTTCAAATAA 434 29 100.0 36 ............................. CTTTATTGTTTGCCGCGGTTCTTGCCGCGGCCTTTT 499 29 100.0 36 ............................. AGTAAATTTTCTAATACACTTTTTGTATATAATATG 564 29 100.0 35 ............................. CCCGCAAGAATGACCTTGTCGCCAACTTTCATATT 628 29 100.0 36 ............................. TACTGTCTAATCTAACACGTGATGCGACAACACCAC 693 29 100.0 36 ............................. AAGTGTCAATGTTAAAAAGTATACCCGATAGGTCCG 758 29 100.0 37 ............................. AACAAAAACATCATCCAGATTTCACCGTCAAATCTTC 824 29 100.0 36 ............................. GAAGAATGGGGAAATGTTCAAAGTCTCACTGATATT 889 29 100.0 37 ............................. AGCTTTGGATCAGGCTATTTCTAGTCGATTGGATACT 955 29 100.0 37 ............................. TATATATATGTTGTATACTATAGTGACGGCAACAAGT 1021 29 100.0 37 ............................. GTTATTAAAGGTATCACAATCTATAGAGATGGTTCAC 1087 29 100.0 37 ............................. AAAACTCTTTGCGCCTCTTCGAGTTCATCCTCAAGCA 1153 29 100.0 36 ............................. TTTTGTCTCTTTACTCATCGTCATCGTCACCCCCAT 1218 29 100.0 37 ............................. TTCTGTCTGTGCGGAATATTCATTTTTCAAAGACACC 1284 29 100.0 38 ............................. TCTTCTAAGATCTCGATTTGTGTGTTTTCGATATTTGT 1351 29 100.0 37 ............................. GAGATCTGGTCTATACTCTTTTTGTACGTATCTTCCA 1417 29 100.0 36 ............................. TAGCGAAGCTTTCTCAAATCCATTAAATTCGAAGGT 1482 29 100.0 36 ............................. TATTGTAAGGCAGTTACATTCAAGTGGAGTAAATAA 1547 29 100.0 36 ............................. TAGCTCAATATCTTCAAAGTGTTTCAACGATTTTAG 1612 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================== ================== 22 29 100.0 37 GTTTTATCTGAACTATGAGGAATGTAAAG # Left flank : CGGATTGAGTACAGCCTTACAACCTCGCGGTACATAAGAAAACGAGGCAAAACATTTTCCGGCAAGTAAAAAGCTGTACTCTAGTTAGGCAATCTTATTTAAGAGAACAAAGTCTCAAGGAGGGGCAACCTGAAACTATTTTACCAGAGGTGTTAAAAAATATGCATTCAATTTTCAAAGACCAATTTTAATTTTTACCGAACTTATTATACGAGGAGGGATTAACATGAAAAAG # Right flank : GATCGACAACAAAGACAAAAAAATATTACTTGAATACACTATACGATTTAAAAAAATATGATGGGAGGGATAATATGCGCAGAGCATATTTTTTGGTGAGTGAGAAAACCTATAAATTATTTAGGCGCAGGTTAAGATTCAATGAATTAAAAAAGTATGGTAAAACGTTTTATATCACGGCAGACTCAATACAAAGACGGGGCAAGCACAAAGACGGGTATTTTGTACGACCGCGTGAATTGGCATATATGAAAATATTGCTCAATGAAAACGATATAGAAGTACTTGGTCACTATGTAATATTCTCCAATGAACTGACAGAAGCAACAGAAGAAGAGCGCAAGATAATGGAACAGATGGCAGAAGAGGATTACCATGAATTGTGTGAAATTACCAGCAAGGAAAAGGAGGAGAAATTAGTATGACAGAAAAAACAAAGGTAACGGAAAACGTTGAAACAACAAACGAACAGACACCGCAAGATATTGTACCAGTCACGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACTATGAGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 81264-78851 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNGG01000026.1 Fervidobacterium sp. 2310opik-2 contig_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 81263 36 100.0 40 .................................... TTTGATTGCCCAATAACTGTCCGAACCAACGGTTATTTCT 81187 36 100.0 41 .................................... CTTTTGGTGGTGTCTCAGGATTTCGGCAGAAGCTATTCACT 81110 36 100.0 40 .................................... AGAAGTTGAGAGATGAGCTGATAAAGGTTGAAGAAATTCA 81034 36 100.0 40 .................................... TGGTGTCTCAGGATTTCGGCAGAAGCTATTCAATTTTCAA 80958 36 100.0 41 .................................... TTAATCCACACGACATGCTTTCAAAAGGAATACTGTCTCTT 80881 36 100.0 40 .................................... CTTAAGGCGGTCCTGACGAGATCGATTAAAAACGACCTAT 80805 36 100.0 41 .................................... AAATGGGGGCTTACGTGCCCCACTACTTCTTGTTGGAATTC 80728 36 100.0 40 .................................... AAGCTTTCTACTTCTAATGTTACAACCTCATTCTCAGGCA 80652 36 100.0 41 .................................... GTCAGCAAACCAAAATTTGTGACCTTGTGATTTTATCAATA 80575 36 100.0 41 .................................... CCTTAAGGCGGTCCTTACGAGATCGATTAAAAACGACCTAT 80498 36 100.0 42 .................................... AGTCAGCCTCCTTAAGGCGGTCCTGACGAGATCGATTAAAAA 80420 36 100.0 41 .................................... AAAAATGGGGCTTTCGCCCCACTACTTGCTGTTACTATTGT 80343 36 100.0 42 .................................... TGTAAAACAGGTATGTTGTGTGGAAATCATCGCCACATCTTA 80265 36 100.0 41 .................................... TGAAGGGCGATCCTGATGGTATCTAGCAACAAAGTCCTTTC 80188 36 100.0 41 .................................... AAAAAAATGGGGCTTTCGCCCCACTACTTCTTCCCGCCGGA 80111 36 100.0 40 .................................... TTTGTTGTTACTTTTTGGGACCCACCTCCTTTCAATTTTG 80035 36 100.0 41 .................................... ATCCTGGTCGGTGAGGCTGACGTAAGTCAGCCTCTTGATGG 79958 36 100.0 40 .................................... TTGATGGCGGTCCTGACGAGATCGATCAAAAATGACCGAT 79882 36 100.0 40 .................................... AATATTAATTGCTGTTCTTTAGCCGATAATGAGTTGAACC 79806 36 100.0 40 .................................... TTTGGTCGGACCAGTCCGAAAAGGACTGGTCCGAGAGGCT 79730 36 100.0 41 .................................... AAATGGGGGCTTTCGCCCCCACCCACTACTTGTTACTATTG 79653 36 100.0 40 .................................... TATTATGCCAACTAGTTGTCCCTTGCTTAATTTCGCCATA 79577 36 100.0 41 .................................... TCCTGATCCGACCAGGAGCTAAACTCCTGATCGGTGAGGCT 79500 36 100.0 41 .................................... AAAAAAAAATGGGAGCTTTACGCCCCCTTGTTGGAATTGTT 79423 36 100.0 41 .................................... GGTGGTTTCCAGCTGTATCAGGAGTCGGAGCAATTTCTCCA 79346 36 100.0 40 .................................... TTTCCTTTTCCCGCATTCATTGAGAATTACTAGTACCACT 79270 36 97.2 39 ...................................T TCACTCCTTCCGGCAGTCTTGTCATTATCTGGGCGACGA 79195 36 100.0 41 .................................... ATCGAGGATCCATATATAATCGTTTTTCCATAGATAATTTC 79118 36 100.0 40 .................................... TTTTTTCCAGTTCTTGTATAATGTTTCTTACCATACTATC 79042 36 100.0 42 .................................... ACAGGGAAACCCCCTGTCAACATATTCAAACTAAAAGCGTTT 78964 36 100.0 42 .................................... TAAAATGATATTATGTTTCATGTTTAGTGTTATTTTTCTTCA 78886 35 75.0 0 T....C......-..T..CA.......T..A....A | T [78877] ========== ====== ====== ====== ==================================== ========================================== ================== 32 36 99.1 41 CTTAGGAAGGAACTACTCTCTGAAAGAGATGGAAAC # Left flank : TAAAGATATTTCATTGACAAAAAAATAAAGAAATGTGGTATAATTTAATCAAAGAACACCAAAATATCAAAAACTCCCATAAAGTGTTGATAATCATTCGCAATAATCTTAATTGCATTTAAATAAAATCATTTTTTAACAGCACTAAAAACTCAATCAATCCAAAATCAGCATGAATAATTGATCCTCTCAACTTTTTAGCTTGACTAAAATTCAGAAAAGCGCATAAATAAAGAAATATCTTAGAATGTTAGCATTACGAAATACCGTTTCCCTACCTATTGTTACAACCATATTTCGATTGTGAAGAGATTGAACCAAGCAAGTATTCATGGTAATTTAAGTGGTAACAAGCTAAAAAATAGGTTGGGAATCGGCATGAATAAAGAAGATAAAAGCAAAATTAGTCAAACTAAAAATTTTTTAGACAATCAAACTTTTGAGGTAGGGAAAATCGCGTTCCAAGATAATAGAATTTATGCATATTTTGGAAGGTAACT # Right flank : AAACAGTGCTTATGGCACTGTTTTTTTATTTACTTTGCTCAAAGTGGAACTATTTTTTGAAGGAGATTGACAATTAAAGAAATATTATATGTGTAAACTCACATGGGTTTCTATTCAAAGCATTATTGTGGGGAAAATATTGATTCTTGTGTTGTATAAAAACCTATCATACTAAAATCAGAAAACTATAATATGGAGGTGAAAGAATGTATTTTATTGAGTTTTTAGCCTGTATTGTTGGATATGTTTTGTGTGATTGGCTTTACAAGAAAACAGATGAAGGTATGTTTTGGGTTTTGAAATGGCCGTTGTTGGTTGGTATTATTATTTTTGGTTTATTCAGCTGCATGTATTTTTCTGACCCGCTGGTTTTTAAATTGTGGCCACCATTTTAATGAATGAAAGTTGGTAATTAGTCATTGTAAAGAGGCTAGAAGTGTTATTAGTCGGAGGCCGCTTGACGTGGATGCTCAAGCGGCTTTCTAAAATTTAAATTGGCA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAGGAAGGAACTACTCTCTGAAAGAGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.40,-3.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 96388-98564 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNGG01000026.1 Fervidobacterium sp. 2310opik-2 contig_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================= ================== 96388 36 75.0 40 AA......T.........A.TT.A......A..G.. ATAGGTGATATCACTTTATCATGGAAAACTTCGCTAGCGC A [96392] 96465 36 100.0 41 .................................... TAAAGGTTTCTACGAAGAGATTTTTGAGATTCTTCAAGTAT 96542 36 100.0 41 .................................... CGTAAGACGTGATCCAAAGAAACACCGCCAGCGCGGGGCGG 96619 36 100.0 41 .................................... TATGGTAAGCTTGATGATACAAATCCTCAGCCTAATGGGCT 96696 36 100.0 40 .................................... TTCAAACAAGGTGAGGAATCATGGGCAGCATCGTTGGACA 96772 36 100.0 40 .................................... TAATGTTCATATATATGATTGAAAGATCGTAACACAGAAA 96848 36 100.0 42 .................................... AAGTATTCTCAGCGTGGCAGCCATCATTATAGGCGTCACGGT 96926 36 100.0 41 .................................... GTGGCAGATACATATTCAATTAAATAAAGGAGGCGAAAGTA 97003 36 100.0 40 .................................... GAAGAGGCTGGCGAAAGCCAGCCTCACGGACCAGGATTTC 97079 36 97.2 39 ...................................A ACAACTCATAGCCGCAGAAAGAGCAGTTATCAAGCAACA 97154 36 100.0 41 .................................... TAGCGCGTAGAAGAGGGTTCCAGAGGATCTATTTCTCTTTT 97231 36 100.0 40 .................................... TGAGAAAAGTGTTCGAAAACTTTGAAAGGGTTCTTTACTT 97307 36 100.0 39 .................................... TGATTTTCCAAGAAAACGTAATAATAGTAACAACAAGAG 97382 36 100.0 40 .................................... TGGAAAGTATATTATCGGTCTGTAGAGGTTTGGGGCTGAG 97458 36 100.0 45 .................................... GAGGGCGGCCTGGTGGAAATGGAAACAAGTAAGTAGTTGGTGGGG 97539 36 100.0 40 .................................... CGAAAGAACAGCAATTAATATTGCTGTTCTTGAGCAAAAT 97615 36 100.0 40 .................................... AAAAGGACATTTTTAATAGATCTCGTCAGGACCGCCTTAA 97691 36 100.0 39 .................................... TTAATATTGCTGTTCTTGAGCAAAATTGAAAGGAGGTGG 97766 36 100.0 45 .................................... CCTTAAGGAGGCTGACTTACGTCAGCCTCCCCGACCAGGAGTTTC 97847 36 100.0 40 .................................... TCGGTGGTCAGAGGCGGTCCTCCGGCGGGAAGAAGTAGTG 97923 36 100.0 41 .................................... ACAAAAAGAAATAGGGGGCCCACCTCCCCCCTTTTTTGGTC 98000 36 100.0 40 .................................... GAAAGGACTTTGTTGCTAGATCTCGTCAGGACCGCCTTAA 98076 36 100.0 40 .................................... ACTCACACACGTCCCACTCAAAATCACAGAAGAAGATTAT 98152 36 100.0 40 .................................... AGCTCAAGTCTATAGAAGAGCGTAACTTCGTAATGTACAA 98228 36 100.0 40 .................................... CAAAAGGAATAACACAGAGTAACAGCGCGCACACCTTAGT 98304 36 100.0 35 .................................... TCATCATCACTTAGCAAGTCTTTTGAAAAGTCTTA 98375 36 100.0 42 .................................... TGTGTAATTGCACCAGCTTTGAGCCTGCGTTCGAGCTCACTT 98453 36 100.0 40 .................................... CCTTAAGGAGGCTGACTTACGTCAGCCTCCCCGACCAGGA 98529 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================= ================== 29 36 99.0 40 GTTTCCATCTCTTTCAGAGAGAATTTCCTTCCTAAG # Left flank : AAATACAGTAATTTCAATTGTTATATTTTAGTATTATTAAATTTTGAAAATTATGAATAAAGAAAAAATTTGAAAAAATCAAGTTTTAAAAGCCTTATTATTCTAAATTAATAACCTTGTTCAAAGATGTTCCGCCCTATTATATTGTCTCAGTTTTTTTACTTTCATTAAATGCGACAATAATTAATAAAAATAAACAATTACCTCTAGCGTTCATAACATTTGTGCTTTTTGCAGAGAAGCCCCTTCTAAATACCCTTGAGACATTTACTAGATTTCAAATGGAGGGATTAGTATTTACATACTTCCAACTTAATCTACTCATCAATATTATATTTATTTTGCGAATTAATTTAACAAACAAACGCAAGGTGGTTAAAAGCCACCAAAATCTTTTCAGGCAAATTTCTATCTTCTTAAGAAAAAATTTTTTATTAAAAAAATGAGCTTTATCCTTTATTCCTAAGAAATAGTTCAAACGAACTGTTTCAATAAATTAT # Right flank : GGGTTACCTTCCAAAATAAGCATAAATTCTATTATCTTGGAACGCGATTTTCCCTACCTCAAAAGTTTGATTGTCTAAAAAATTTTTAGTTTGACTAATTTTGCTTTTATCTTCTTTATTCATGCCGATTCCCAACCTATTTTTTAGCTTGTTACCATTTAAATTAGCATGATTAATTGCTTGGTTTAATCTCTTCACAATCGAAATATGGTTGTAATAATAGGTAGGGAAACGGTATTTCGTAATGCTAACATTCTAAGATATTTCTTTATTTATGCGCTTTTCTGAATTTTAGTCAAGCTAAAAAGTTGAGAGGATCAATTATTTATGCCGATTTTGGATTGATTGAGTTTTTAGTGCTGTTCAAAAATGATTTTATTTAAATGCAATTAAGATTATTGCGAATGATTATCAACACTTTATGGGAGTTTTTGATTTTTTGGTATTCTTTGATTAAATTATACCATATTTTCTTCTTTTTTTGTCAATGAAATTTTTAA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATCTCTTTCAGAGAGAATTTCCTTCCTAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //