Array 1 247845-250188 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHYSK010000001.1 Klebsiella pneumoniae strain B755779 contig00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 247845 29 100.0 32 ............................. GCCGACATGCTGGGCGCGATCACAACGGTTAA 247906 29 100.0 32 ............................. GGCGCGGTGTGGTATTGGGTGAAACTGGACGA 247967 29 100.0 32 ............................. GCACTTTACCTTCGAGGTCGTTCCCTTCGAGG 248028 29 100.0 32 ............................. ATGTATGGATCGAGCCAGGCGCAACCACGAAC 248089 29 100.0 32 ............................. CCAGGGCTTTCGGACCGTCAGGAGCAAATCAA 248150 29 100.0 32 ............................. TAAACGGCACAAGCGGCACCTGCGGCCAGGTG 248211 29 100.0 32 ............................. CGTGTCGGTCATGGCGATGCTGGGCGGCGATA 248272 29 100.0 32 ............................. CGCCTGGGGGGATCGCGGTGAGTGATTCATTT 248333 29 100.0 32 ............................. CGCCTCAACAAATGCGACTTCATAGCCTGCTG 248394 29 100.0 32 ............................. GCTCGGTGTGGCCTAAATCAATTCGCGGATCC 248455 29 96.6 32 ............................C CTTGCATACGTGTTACCCTCCATAACCTCACA 248516 29 100.0 32 ............................. CGTCGCCTGGCCGTCTGGTAAGTCCGGTTTTA 248577 29 100.0 32 ............................. CAGATATCGGCACCGCGAGGTTCTGAGTCGTA 248638 29 100.0 32 ............................. AGATCGAATAGTCGTAGTTTGTTTTACGGCAG 248699 29 100.0 32 ............................. CTGGAACGGACCCTGAGCGCCTTTGGGGGAAA 248760 29 100.0 32 ............................. ATTTCTCCGGTTGCCCCGGGTTCCCGGGGCAT 248821 29 100.0 32 ............................. GTGCTGGCCTTGAGCTTTTCAGCAATACGTCC 248882 29 100.0 32 ............................. TGCAGACGCGGCACTTTTACCCACGCTTGAGC 248943 29 100.0 32 ............................. ATATTCCGAGCGTTGCCAGCCTGCTGCGCAAT 249004 29 100.0 32 ............................. GCGGCGGCGTTAGAGCGCGCGCCAGCGTTTTC 249065 29 100.0 32 ............................. ACGGCATCTGCGAAATTCATGTTGCTAAATAC 249126 29 100.0 32 ............................. GCTGCGTATAAAGGCTGCAGACCGGAGAGAGG 249187 29 100.0 32 ............................. ACTGCGATTCGTTGACGATTATTCCTCCGCGA 249248 29 100.0 32 ............................. CGTTATTTTAAAAGCTGACGGCGAAGTGGTGG 249309 29 96.6 32 ............................A GCGCACCCGAACCATTACGGGGCTTGCCATTC 249370 29 100.0 32 ............................. GCCGAGTTCGTCAATGCTATGAATTTTATAAC 249431 29 100.0 32 ............................. CCGGACAACGCGGTCAGTACAGATTTCATTGG 249492 29 100.0 32 ............................. TTTTTTTACTTCCGCTGGCGAAGCGGGCGAAA 249553 29 100.0 32 ............................. AGTGGCGTTAAAAATGTCGCGGGTAATTTGTT 249614 29 100.0 32 ............................. TGCTGATTTCGTTTGCAGGGAAAATGGATTTT 249675 29 100.0 32 ............................. GGCAGCGAGGCGCAGATCCCGCAGCTTTACCA 249736 29 100.0 32 ............................. TTCGGCCAATAACCGACTATGTGAGGGACTTT 249797 29 100.0 32 ............................. CCCGATAAATTCACTCTGTGTCATACGGTGAT 249858 29 100.0 32 ............................. GCATCGACGCCCGTATCGTTATCGACAAAATA 249919 29 100.0 32 ............................. ACACGTCGTTAGGTGTTCCGTACTGGGAGAAA 249980 29 100.0 32 ............................. CCAGGCGACCGTATCTGGGTGCGTGAAACGTG 250041 29 100.0 32 ............................. CCGCAAGCCGTATCAACGAATTACTGCTCGAA 250102 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 250160 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 39 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAAATTGTTGTGATAAAGTTGGTGAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGTACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //