Array 1 14536-13407 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZGM01000031.1 Gilliamella apicola strain wkB108 Gilliamella_apicola_wkB108_contig126, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 14535 29 100.0 32 ............................. TATTTTGTCAACATATCGTATAACGCAATAAT 14474 29 100.0 32 ............................. CTAGTTAACCATTGCCCACAGGGACGCTATCA 14413 29 100.0 32 ............................. TTGATTTATTAGGTATGTGATCAGCTAAATTT 14352 29 100.0 32 ............................. ATAGTTTTGGAATATAAATAATATAGAATATT 14291 29 100.0 32 ............................. CTGCTAGCCGTCAGTATGAGCAAAACCGTATC 14230 29 100.0 32 ............................. GCACCCCGTGGGCCATTCGCAACATCATTCGA 14169 29 100.0 32 ............................. TATTTATCGCTAATAGTACATTTAAATAGCTT 14108 29 100.0 32 ............................. TCAATAATGGTCTTTAATGGTCGATAAGGGGC 14047 29 100.0 32 ............................. CTCCAGCTTCATTGCCTTTATCTTTTTTTCCT 13986 29 100.0 32 ............................. AGGTTTCACATTCATGGTCTGTTTCGGCAGGT 13925 29 96.6 32 ............C................ AAATAATTTCGTTTATAAAAAATCCTATTGTT 13864 29 96.6 32 ............C................ CAGCCATTGCCGAAGATAACGATGAGAATGTT 13803 29 96.6 32 ............C................ GTTTACAAAATAATAGAGACGCCATTTGTTAC 13742 29 93.1 32 .......T....C................ TGACCATTTAGGGTATAAATGAGCACACTATC 13681 29 96.6 33 ............C................ AACGTAACAAAACAGGGAAACCAGAGTCCATTA 13619 29 96.6 32 ............C................ GAGATTCAATCGAGGTTAGGACATAAAAAATT 13558 29 100.0 32 ............................. AACATAGCCGGCTAGGGTGGCGGGTTATTACA 13497 29 96.6 33 ............C................ ATATATGTGAAATAGCAGAACGTGCTGAAAAAC 13435 29 79.3 0 ............C.T......C....AAT | ========== ====== ====== ====== ============================= ================================= ================== 19 29 97.5 32 GTGTTCCCTGTATCCACAGGGATAAACCG # Left flank : ATTAATTGAAGATGTTTTATCTGCTGGTGGAATTGAACCACCACCACCGCCAAAAGATATCCAACCTCCGGCAATACCAGAGCCACAATCACTTGCGGATTGTGGTTTTAGGAGTCACTAACATGAGTATGGCCGTTGTGGTAACCGAAAATGTCCCAGCAAGGTTAAGAGGGCGTCTAGCTATTTGGCTATTAGAGATCAGATCTGGTGTCTATATAGGTGATATATCCCGACCAATTAGAGAAATGATTTGGCAACAAATCCTTGAATTGGCCGAAGAAGGCAATGTCGTCCTTGCTTGGGCAACCAATACCGAATCAGGTTTTGACTTTCAAACTTACGGTACTAACAGAAGAGTTCCGGTAGATCTAGATGGTCTACGATTAGTCTCATTTTTACCTGTTGAAAATCAATAGGTTAAAGTTCTTTAAAAATAAGAAAAAGTTGGTAGAATTGGAGTGTTGCTATAACTTTAAATAAATCAAGTGACTATAATTAGA # Right flank : AGCGATTAAATATTAGTTTTGAATAAACAATTTATAATCAGATAAATACGAACCAAATGGTGTGGTTTTTATCGTTACTAATGCCTTGTTACTATACTGGATGCTCTCATTTTTTGTAAAACAGAGAAAAAAGCTTGTTGTGGTATATTCATCAAATATTCTAATCCCTGTTTTACAGTGATGATGTTTAAATGCTCTTGGACCCGGGGTGGTGATTTTATATTCGCCCTGCATAAAATAGACTACATTATAAGGAAACAAGCATATTGTGAAAAAACAGATTAAAAAAATACTTATAAGTCTTATAAGATATTTTTTTATCCGTACATAAATGCGTTCACATAGTAATGTTTTTGGGGTAAAGGCAAAGATTAAACTGATAACAAAAGTAATGATGTAGGTATAAGATTCAATCGCTTTGAAAACAATTATGTTTGAATTGATTTTGATTATGAACATAATGTTAATAATGACTATTGTCATCAATACAATAGTTAGTA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATCCACAGGGATAAACCG # Alternate repeat : GTGTTCCCTGTACCCACAGGGATAAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTATGCACGGGGATAAACCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.20,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 32760-33032 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZGM01000031.1 Gilliamella apicola strain wkB108 Gilliamella_apicola_wkB108_contig126, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 32760 29 100.0 32 ............................. ATATTTTTTAATAAATCGATGTCGCCCTCATT 32821 29 100.0 32 ............................. TTAACCGAAAAATCATTAATTAAAACGTTATC 32882 29 100.0 32 ............................. TGTCAATAAAATGCCCCTCAAATGTCAATAAA 32943 29 96.6 32 ..............T.............. TGATCACTATCGGTGATGATATAAAAATTAGA 33004 29 93.1 0 .............G..............C | ========== ====== ====== ====== ============================= ================================ ================== 5 29 97.9 32 CTGTTCCCTATATACGTAGGGATAAACCG # Left flank : AAAACTCAGTCAAGCATCTATAGCTGAACAGAATACATTAAGCTTTGAAAACGGCTATTGCCGAGGAGTACATGATATATGGCAAAATAATATTGAGACATCAACTCGTTTAACCAATGATAATGTTGATATTTATCTCGCATATCTTGAACAAGATACGATTATGCCATATTCAACAAGTAGTGATTATGCTTGGGAACAAAGTCGTTTTACATTAAATAAACGAAAATGGTTAAAAGTCGAAGACAACATTCCACAACTTGACGAAAACCGTTTAGAAAAGCTCAGAAAACAGATTCACCGCCCTAATGCCATTATCATCTTAATCGAAAAAGACAAAGCAACACCATTTTACTCAAAAGAGCTAGGATTTTATGCCAATTAATTTGCCTTTTTTAATACCACACCAATCCGATATTTATGCTTAAAAAATAAGCTAAGAATTTGGTAGAATTTTAGTGCTAGCTATTTTAATTATAAAACAATAGGTTATAATTGGT # Right flank : CTATACTGTAAAAACAATGATTAAAACAATGCTAGAGGGGCTGAAGGATAGTAACTTTTTTAAATCAAGCATTGAATAGCTTCGCTTTTTTGCAAGGGACTATTGATATACCCTACCTAAGATAGAGCTTTGCCACGCGGTAACACCAAGATAGGTGATAGGCGTGAAGCTTTGCATAAAATTGCCATTTACCATAATACTGACGGATCAATACCAGATGATCAGCTTGTCGTAATACCTAAAGATAAGGCGCTGGCAAATAATAAAAGTTGGATTATTTTTTACACGACTAATATGGTTGCTACTCCCCCAAAATTTAATGCGTGATTAGAGGTTACCACTTTATGCAATCGCCATTATAGAATTGATTCACTCATTGGTATTAAATACAAAATAACCGAGTATAACAACGTCTATCATATAACCTTGAGCATAACAAAACCTGTACCTCATTCATTGACAGAGCAAATGAATTTGTATTGGTGGAATGTTTGAAAAGG # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCTATATACGTAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: F [matched GTGTTCCCTATACACATAGGGATAAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.20,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 7691-8878 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZGM01000006.1 Gilliamella apicola strain wkB108 Gilliamella_apicola_wkB108_contig103, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7691 29 100.0 32 ............................. ATTATGAGCTATCAAAGCGCACTTGTCAGACT 7752 29 100.0 32 ............................. GCGGGCAGGTTCAGTACAATAAACTTGATGCA 7813 29 100.0 32 ............................. CAAACACGCGTAACTATTTATCATGACATTTA 7874 29 100.0 32 ............................. GATTATATACAGGTAGTTTATCAGTCAGTCTA 7935 29 100.0 32 ............................. CCAACAGGAACACGGCAGTCAGTAAGTGTTAA 7996 29 100.0 32 ............................. GATTCTTTGAACTCATTAACATGCTCATTATC 8057 29 100.0 32 ............................. TTGAAATTTTTCATATGAACTTGTGAAATTGC 8118 29 100.0 32 ............................. AAATAAAGCACCGTTCTAATTTATGTGAACTC 8179 29 100.0 32 ............................. CAGCATTACAAATCAAGATTAAATATATGCAA 8240 29 100.0 32 ............................. CATATAGATTATTGCCAATTCGGTAAGGATGC 8301 29 100.0 32 ............................. TTCGTTCATAAACTAATCTGCGTAATTCCAGT 8362 29 100.0 32 ............................. GATTTTTTATTGTTTCAGCATTTAATATACAG 8423 29 100.0 32 ............................. TAGGTAAACATGACCACACAATTACAATTAGC 8484 29 100.0 32 ............................. CAATACTCACGCCGTACTATCAGCCTGAACTT 8545 29 100.0 32 ............................. CAAAATAGGCTAAAATAAGCAAAATGACAATC 8606 29 100.0 32 ............................. CTCGCTGGGTTTAAGCTCTAAGTTGACCAGTA 8667 29 100.0 32 ............................. CGAATAGAATAACTAACAGATTCCCGCAAATT 8728 29 100.0 32 ............................. GATTTCTTAAAAATGCCAGTCGGCAACTTAAT 8789 29 96.6 32 ..............T.............. GGCGGCGCAATCGCACAGTGCCGATTACAAAA 8850 29 93.1 0 .........................GT.. | ========== ====== ====== ====== ============================= ================================ ================== 20 29 99.5 32 GTGTTCCCTGTATGCACAGGGATAAACCG # Left flank : TCGCCTTATTAAATCCTGACAGTGGGTCACTATAACTATTTGTTTCTGGCTGATAAGTTGCACAACTTGTCAATCCCATTACACAAAACAACACCCCAGCAATTTTCTTTTTCATAGTATTTTTAATTAAAAATATCAAATTCCAGATTCAATAATTGTATCATGTTTACTCAAAATAGAAAATTTTTCGTTATTTGGTTGGCATTATCTGTGTAAATTTACTAAAATAACTTTCCCCGTCGATGACCTCATAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAGTTGCAGGTTCGATTCCTGCTGGGGTCAAAATTATTTGATTCAGATAAACAAATTCAACCGCGGTACATTTCATCTGTTTAATATTCTCAAAATTATAATTTATTAAAAATCAATAAAGTAGGAAAAATAACTTGATTAATATTTGAACTAAAAAGTTGGTAGAAAATTTGGTCATGCTATTTTAATTATTAAACAATAGGTTATAATAAGA # Right flank : GTATGGATAGATATTGATTATTATTGCTCTTCATGTGTGAAGGTGTTTAATTCTATTTTTGAAGGTGAACCATTAAATCAATATGTAAACCTAAATAACTGGCGAAAGTCGATTTCTGTTGTTTGAATTGCCTAAATAACATACTATTACAAAAAAATAAAAGGAGAATGGTATGAAACGAATTTTATTGATCGGGTTATTAGGGGTGATTTTGACTGGTTGTGGTAAAGACAATACATGCCCTGATACAGAGAAGTCAGTTAGGAAGCAGGCTCTGGATAAAGTCAAATCAACATTACAATTACCGTCAACAGCAACATTCCCGAATTCAGATAAAAATGGCTTAATTGAAATTGGTGAAAAGGATGGTATATGTCATTATTATATTGAAGGTGACGTTGATGCCGAAAATTCCTTTGGTGGAATTGTTAGAAGTCACTTCTCAATGAATCTTGAATATAATATGTCTACTGAAAAATGGAATTTCGAAAACTTTGAAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATGCACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTATGCACGGGGATAAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 12156-12978 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZGM01000006.1 Gilliamella apicola strain wkB108 Gilliamella_apicola_wkB108_contig103, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 12156 29 100.0 32 ............................. TAAAAATTGTCTCTGATTGATTTTTTTTGACC 12217 29 100.0 32 ............................. GTCAGTAATACATTTAATCTGACATGGAGTTA 12278 29 100.0 32 ............................. TTGGCGATGATGGTTGGATTGGTGTGACGGCA 12339 29 100.0 32 ............................. GAGCCTCGTTTTACATGTAACTGTTATATAAC 12400 29 100.0 32 ............................. CAAATACGCGACCTATATTCTGCTTAATGGTT 12461 29 100.0 32 ............................. GCGTCACCTTTTTTATAATCTCCAGCAACAGC 12522 29 100.0 32 ............................. TATAGGCGAAATCGCATCAAACGCCCCAACCA 12583 29 100.0 32 ............................. GATCGGACAACGATCACCCTAATGATGCCGCA 12644 29 100.0 32 ............................. TAACACCAGAAACAATCAAAAAACTAACTGAT 12705 29 100.0 33 ............................. CGACCGGTGACAGCGTGGAAACATCAACAGCTT 12767 29 96.6 32 .A........................... TCATTTAGCGCCAAAAATGGGTTTAGTTTGTT 12828 29 100.0 32 ............................. GGAGCCGGGGCAGTCAAACCACATATTTGCCC 12889 29 96.6 32 ..............T.............. CGCCCTAAATGGATATTTGAATTATTAAAAAA 12950 29 75.9 0 .......T..C..........T..TTAT. | ========== ====== ====== ====== ============================= ================================= ================== 14 29 97.8 32 GTGTTCCCTGTATGCACAGGGATAAACCG # Left flank : TATCGTCAAGGGTCAAAGTTCTTAGATTTATTGATGAATACAGATAGTAAATATGTGACGACTTTTTAGTATTTATCGGATTAAACTGGTACTTTTAATTGTAGATGCAAAGTTAACTTAATGTCCTTATCGTATAACGATAAATCGTTCCTTAAAATAATACATAAACTAAAACAACCGATGAGAGTCAGTTTTTATTCATCAAACGCCATAAATCAAATACTATTAACGCAAATGTATTGATATACCCACCTTTGCCGTCAAAGATAATATAATATATAAATAAAAGTTAAAGCCTCAGTCGAGTTCAATTGATAACCTTTTTCTTGAGTAGTTAATCAGAAGAAATGATTGGACATATATTGAATAACACAAGATTTAGTTTATTGTGCAAAAAACATGTTCATCTTTTGCAAAAAATAGTATGATTTTTATACTAAAAAGTTGGTAGAAATTTCGACCTCACTATTTTAATTATTAAACAATAGGTTATAATTAGA # Right flank : GCATCTGTGTTTGGTGTTTTTTCTCTTGTCCTTACTTTATAAATTTCATACTATTAAATTAAATAATTTATAAGGAAATAGTATGAAAAAAATTCTTTTTTGTTCGTTAATACTGTGTTTGTTGACTACTGGATGTAGTACTGTGGGAAGTGATAATGATTATTTAGCATCTGTGCCACAAGAAGCTGATAGTAAGATAGTTGGGGTATGGGTTGCTGGGGCGGGGCCTTATGGACCATATTTGACTACAATGAAAATAAATTCTAATGGTACGGGAGTACTTTGTTATTCGTTGAACAGAAGAGTTGTTCTGTATAAGCTTATCTATAATGGCTCAGCAGTTATTATGCAAACAGGCGATAAATTTGGTATTGATAGTTTTAATGCTAACCAATTTAATGTTACTACTAGTCATTTCCCAAGACAAAAATATACGTTTCATCGAGATGATAATTACACTAAGTCATCCGTGTCTTGTGAAGCAAATGTTAAATAAGCTC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATGCACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTATGCACGGGGATAAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //