Array 1 2465-995 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTST01000006.1 Escherichia sp. MOD1-EC5948 MOD1-EC5948_6_length_207414_cov_28.4483, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2464 28 100.0 32 ............................ TACGTCAGAAACAGCAGCGAGCCGGTCATCTG 2404 28 100.0 33 ............................ GTAATGATGTAAAACATCAGGTTGATAATATGG 2343 28 100.0 32 ............................ TCCCGGACACCACGCATCCAGTCACGGATGGT 2283 28 100.0 32 ............................ GTTGTGTGTTCGCGAAGATGTGCAGGGGGCTA 2223 28 100.0 32 ............................ AACCGAAACGGCAGTAGTTAAAACGTGCGAAC 2163 28 100.0 32 ............................ AGTTTGATTCGAAACTGGCGCAGATAGTTCAG 2103 28 100.0 32 ............................ TTTATGCGCCCGATTTTCCCGGCGTCACTGCC 2043 28 100.0 32 ............................ AGTGACGGACAGAACGGTCAGGACCTGGATTG 1983 28 100.0 32 ............................ TGACAAAAATCCGTTAGGCGCGGAAATGATGA 1923 28 100.0 32 ............................ TGTTCGCGCGACAATTTGGATACTGAATCAGC 1863 28 100.0 32 ............................ ACTAAATAAGTGGTGTCGTCGCTGCCGCCATA 1803 28 100.0 32 ............................ CGGGGCTTTTTATTCAATATGCCACCGCCGGT 1743 28 100.0 32 ............................ TCAATCCTCCCCGCCTGCGCCGCGTTGTAGTT 1683 28 100.0 32 ............................ AACCCCAATAAGCCGACGTGGGGATTTACCGC 1623 28 100.0 32 ............................ GCGCAGTCATGCACAGCGCGCAGCAGGCTGCG 1563 28 100.0 32 ............................ AATAAGAACGGTCCCTGATGTGCGGAGCACCG 1503 28 100.0 32 ............................ GGTGATAGCGTCGCGGGTAAGCCAAAATATTC 1443 28 100.0 32 ............................ GTCGGATATGCTGATTATTCAGATGACCGAAG 1383 28 100.0 32 ............................ GCCTGCGCGCGCACATCGGCGAGCCTGACACC 1323 28 100.0 32 ............................ ACGCCGGATAAGTCAGCGCGCCAGGGCGCTGC 1263 28 100.0 32 ............................ GTTTATCGGTATTGAACGGGAGCCGCGATATT 1203 28 100.0 32 ............................ AATGATTTTCTTATGAAGAATCTGGACAAAGT 1143 28 100.0 32 ............................ TCTAATCGCCTCGTATCGCCTGGACTGGTTCC 1083 28 100.0 32 ............................ GCACTTATGGCGAGTAACAAAGGTTGAAATGT 1023 28 92.9 0 ....................T...C... | C [1000] ========== ====== ====== ====== ============================ ================================= ================== 25 28 99.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AATTCATTGTCGAGTTGCAGGTTCAACTGGATCAGAAAGGTGTTTCTCTGGAAGTGAGCCAGGAAGCACGTAACTGGCTGGCTGAGAAAGGTTACGACCGGGCAATGGGCGCACGTCCGATGGCTCGCGTCATCCAGGACAACCTGAAGAAACCGCTCGCTAACGAACTGCTGTTTGGCTCGCTGGTGGATGGCGGTCAGGTCACTGTTGCGCTGGATAAAGAGAAAAATGAGCTGACCTACGGGTTCCAGAGTGCACAAAAGCACAAAGCGGAAGCAGCGCATTAATCAGATTGTTAAGTAGGTTGGTGAAGTCCGTAATCTCGTCAGGGGTTACGGACTTTTTGTTTATGGGGTGGGGGAGGTTCAGCCCCTTTTTTTGATGATGATGGTAAGTTGTTGATAATTAGTGCTGCTGGACGGTAAGGATAAAAAAGGGTGGCAGCAGGAAAATGAGATGGTTTTGCTTTATTAACAACGGGCTAAACGTGTAGTATTTGA # Right flank : TACGATGATGGCAGAAATTTAGCTGCGTTATGGCGCTCTCAACTCCGAACCATTAGCTGTGACACACAATAACAATTGTGATAATTGCGACGAGAATCAATTTCTCACACAGAAATCAATGCTGTACTAATCCTAACTCCTTCAAATAAAAATAATCACAGGATGTGTTTATGTCTTCAAATTACCTTACTCCTTCTGATCTCAAAACCATTCTCCACTCCAGGCGTGCCAATATTTATTATCTGGAAAAATGCCGGGTGCAGGTGAATGGTGGGCGAGTGGAGTATGTCACCAGTGAAGGCAAGGAGTCGTATTACTGGAATATCCCCATTGCGAATACCACGGCGTTGATGTTGGGGATGGGAACGTCCGTTACTCAGGCGGCGATGCGTGAATTTGCCCATGCTGGAGTGATGGTGGGTTTTTGTGGTACGGATGGCACGCCGCTGTATTCGGCAAATGAAGTTGATGTTGATGTCTCCTGGCTCAGTCCGCAAAGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //