Array 1 104637-101801 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACLGO010000010.1 Pseudomonas xiamenensis strain PX1 NODE_10_length_161064_cov_125.538677, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 104636 29 100.0 32 ............................. TGGTCCTTATCGCCCTCGAATGGGCGCGGATC 104575 29 100.0 32 ............................. GTAGGTCTGTGGCCGGATGCCGACCTGCACGA 104514 29 100.0 32 ............................. CTGACCACCTCGACTGAGGAAGGCTCTGGGGA 104453 29 100.0 32 ............................. GCCATCAGCGAGACGCTGGGTATCCGCAACCG 104392 29 100.0 32 ............................. GACGGCTATATCGTTCGTGGAAATCAAGCTAT 104331 29 100.0 32 ............................. CCAGGCGAGCAGGGCCGCCCATAGGTCGGGAT 104270 29 100.0 32 ............................. CAGTGGAGGGCGGCCGCATGACCCTGGACGAA 104209 29 100.0 32 ............................. CTTATGCTGGCGCATCGCGTTGTCTGGGAAAT 104148 29 100.0 32 ............................. TCACCCATCTGCTGATCGCGCTTGGTCAGCCT 104087 29 100.0 32 ............................. GACACGCCGGGGGCCAGGGCGCCCACTCTGGA 104026 29 100.0 32 ............................. CATTCAACGCCTACATTCGCGAGCGTGACAGA 103965 29 100.0 32 ............................. ATCATGCGCTCAATCGCGGATGGCGAGCTCCC 103904 29 100.0 32 ............................. CCGGAGTGTGTTTGTCTCTATGGGCGTTGACA 103843 29 100.0 32 ............................. CTGCTGCCGTGATCGACGTTGATGCTCTGGTA 103782 29 100.0 32 ............................. CCCATTATCGGGTAGCTCAGGGTGCTTTTGGC 103721 29 100.0 32 ............................. AAAAGCTAGGCAGCCTTGCCGCTGTTGCATCA 103660 29 100.0 33 ............................. GTGCCTGAGCGCGCGGATAACGCCGGTGACGAC 103598 29 100.0 32 ............................. CTCCATCTTGAGCTGATCCAGCTTGCCGATAC 103537 29 100.0 32 ............................. CAACCGTTTTCGGCAACCCATTCGTCCCTGTC 103476 29 100.0 32 ............................. GGGCCGTGGTTAGTTGATATCAGGCGTCCGGC 103415 29 100.0 32 ............................. CGCATTCAGCGTGGCCCCGCGCCGGTGCTTGC 103354 29 100.0 32 ............................. TCCCGATCACCGCCATTCAGGTCCATGGGGTG 103293 29 100.0 32 ............................. CGGACAGCCTATCTACCGGCATGACCAAGCTG 103232 29 100.0 32 ............................. AGGTCAACCTGCGCGACATCGCCAGCATGTAC 103171 29 100.0 32 ............................. AGGTGAGGGATATGTGCAACTGTTACGACATG 103110 29 100.0 32 ............................. GTCAGCAAGTTGCTGGATGCCTTTGTCATGCC 103049 29 100.0 32 ............................. TACATGGGCATTCCCTCGCGGGGTGTGTCGAT 102988 29 100.0 32 ............................. GCATCGCCGAATGTCAGTTCATAGCCTCGGCT 102927 29 100.0 32 ............................. GATCTTGCCGATCACGCCATCACTGACCCGGC 102866 29 100.0 32 ............................. CCAAATGTGTCGATTCCCTCCCTCAGTCATCC 102805 29 100.0 32 ............................. ACGGCGTGTTTATCCACTGCCAGCGATTCATC 102744 29 100.0 32 ............................. CTGGAGCGCGGTCTTGTGCAGGATTCGGCGTA 102683 29 100.0 32 ............................. ATGGAAACATTCCTGACATCCATCCAGCTTGC 102622 29 100.0 32 ............................. AAAGCGGACAAGGCTGGCGATACCGGATTGGC 102561 29 100.0 32 ............................. CTGTTCTGCAGCGTGACTACCGCATCGCCAAC 102500 29 100.0 32 ............................. CAAGGCCGGACCCGCCAGCGGTATATCTGGTG 102439 29 100.0 32 ............................. GAGGAATCATGTCCAGCAAGAAACGATATGAG 102378 29 100.0 32 ............................. ATAAACGCGTGGCGTCGTACAGCTTTGCTGCG 102317 29 100.0 32 ............................. GTAAAGGCCAGCCCGCGCTGTTCTGCCGATCT 102256 29 100.0 32 ............................. AAAGCCCGGGGTCTCTGGGTGCCGGTCATACA 102195 29 100.0 32 ............................. GCTGCGGCCATCCGCGCCGGGTACAGCAAGCG 102134 29 100.0 32 ............................. ATGCCCTCCTCGCCGTAGATGGTCGGCAGCAC 102073 29 100.0 32 ............................. CGAAGAAGTGAGGTGTAGATGGAGGTTGCAGC 102012 29 100.0 32 ............................. AAAGCGCAAACTAAACGGGTCAGAACCAAGGT 101951 29 100.0 32 ............................. TCGAGTATCGAGAAACTGGCACCGGACGTGCG 101890 29 100.0 32 ............................. ATGCCGGAGTGGTGACGCTTTATAACCCGGTG 101829 29 86.2 0 ...............A.......A..T.A | ========== ====== ====== ====== ============================= ================================= ================== 47 29 99.7 32 GTGTTCCCCGCACCTGCGGGGATTAACCG # Left flank : GGCAAAGATCATCCCCACTATTGAAGAAGTCCTGGCCGCAGGAGAAATATCACCTCCAGAAGCACCACCCGAATCAGTTCCACCAGCAATACCCAACCCCGAAAGCATCGGCGATGCAGGTCACAGGGCACAATAATGAGTTTTCTGGTCGTCGTTACCGAGAATGTTCCTCCTCGTTTGCGAGGCCGAATGGCTATCTGGCTACTCGAAGTACGAGCTGGCGTTTATATCGGTGATGTTTCCAGAAGAACACGGGAAATGATCTGGCAGCAGCTCAGCGAAGGGCACGAAGAGGGCAACGTGGTAATGGCCTGGGCCAGCAATAACGAATCCGGTTATGAGTTCCAAACCTTGGGCGCCAACCGGCGCTTACCTGTCGAATTTGACGGCCTACGCTTGGTGGCTTTCCACCCTCTTGATACCCCCGATCTTTAACAAGGAAAATTGGTAGAAATTTAGCTGCCGATTTTTCCTTTAAGGAACAGTCGGTTATGCTAAGA # Right flank : GGGCCAGTCAATCTTCTTGGGAGCTTCTGACCCCAGTAGCCAACTAATCAAGAAGCGGACATCCTGTAGTTTCGGTCACGTTTCATCGCCGCATAGCAATCGAAGCATTACGAGTTTAGACAGGAGATAACTTAACATTGTAACTCTCAGCTTATCGATAAATGGACTAGCCAACTTTAACACTCAGTCCTGAAACGCCACTGACTAAACACTATCCCGGCAAACACACAACCAGCCCCAAGCCATTGCCAGACAGTCAGCCCCTGGCCGAGGAACCAATAGCCCAATACCAGTGCCGACAACGGGCTGAGCAGCAACAGAATCGACATGAACACCGGGTCCAGTCCGCGCAGAGCGCGAAACCACAGCAAATAGGGCAACCCCGTGCCCAGCACCGCCAGGTAGAGATAACCGCCCAGCTCGCCGGCATGCAGCGCAGGTGGCAGCCCCTCGTACCACAGCATCAACGGTAGCAACAGCAATCCACCCAGCAGCAGTTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACCTGCGGGGATTAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACCTGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //