Array 1 3466753-3468041 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP009787.1 Yersinia rohdei strain YRA chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
   3466753	    28	 100.0	    32	............................	ACCAAAGAGAGAGAAACATTGTGGATAACAAA 	
   3466813	    28	 100.0	    32	............................	TAGGTAATAAGGCAGTAATGTTTCATCTTCAT 	
   3466873	    28	 100.0	    33	............................	AGTATCATTCTTTGGCGTCAAATCGGGATACGG	
   3466934	    28	 100.0	    32	............................	ATGACGAGTAAATCAGCGAGTGCCGCTGCCAG 	
   3466994	    28	 100.0	    32	............................	TTCTAGGCACATTAAGACGCGCATTTTGCCGA 	
   3467054	    28	 100.0	    32	............................	CACGTCGTCACGTGGAGCGGATTGCCCTAATT 	
   3467114	    28	 100.0	    32	............................	CATTCGCAGAAGTTAAGGCGGCGCACGATACT 	
   3467174	    28	 100.0	    32	............................	TTTTAGGTAAAGTGGGTGCGGCGCAGGGCGCA 	
   3467234	    28	 100.0	    32	............................	AGTCACACCGTCCGCGAGCTAAAGCTGCTACA 	
   3467294	    28	 100.0	    32	............................	AAGCACCATATGAAACAAGCCCAGCACCTATC 	
   3467354	    28	 100.0	    32	............................	GATAGCTGTTGCGGTGTCTCTTTCCTGAAAAG 	
   3467414	    28	 100.0	    32	............................	TTCTTGCTGCCATTTCTAATCCTTGATATTAA 	
   3467474	    28	 100.0	    32	............................	ACAGGCGCTGGCGGGATGGACACTGGCACGGT 	
   3467534	    28	 100.0	    32	............................	GCAAAACGGGATGGCTTCCGTCGCTGTGGCAT 	
   3467594	    28	 100.0	    32	............................	AGCGGTGTAAGTAGCGTAGAAGCCACCTACGC 	
   3467654	    28	 100.0	    32	............................	TACTACCTCCATGGGGACATATGTGGGTATAG 	
   3467714	    28	 100.0	    32	............................	ATAAAAAAAACTATTTCACCTTCAGTGTCTCG 	
   3467774	    28	 100.0	    32	............................	TACTTCCCCGATCTGCGCCAACGGCTGTTTAT 	
   3467834	    28	 100.0	    32	............................	TGGTCTTGTTGCATAGCACGACGCGCCAGCCG 	
   3467894	    28	 100.0	    32	............................	GCCAACGCGGTAATTGGTTACATGCGGCGGTA 	
   3467954	    28	 100.0	    32	............................	TGGAGAAAGAGCGCAAAGAGCGTGAGAAAGCA 	
   3468014	    28	  96.4	     0	.........T..................	|                                	
==========	======	======	======	============================	=================================	==================
        22	    28	  99.8	    32	GTTCGCTGCCGTGCAGGCAGCTTAGAAA	                                 	       

# Left flank :   GCGCAAGACATCGATAATTTGATGCAGCAAAACTGGTTACAAGGTATGCGTGACTACGTTCGATGCAGTGCGGTATTGCCGGTGCCTGAGGCAGTACAATACCGAACGGTGAGGCGAGTACAGGCAAAAAGCGCCCATAACAAGCGGCAGAGATCGATTGCTAAAGGGTGGCTAACTGAACAGCAGGCGTTTGAACAAATACCCGACACCCAACAGAAATCTCTCAGGTTGCCTTTTATTCAACTGCGTAGCCTTTCGAACGGCAATACGATGAGAATTTATATTCAGCATGGCGAATTGCAGGAACAAGCTCAGTTGGGAAGTTTCTCTGCCTATGGTCTAAGTAGCAGTACCACCATACCCTGGTTTTAACCCTTTTTTTCGGCTATTGCTAACTGATTGTTTTGTAATGGTGTAATGAGAGGGTGAGAAAAAAGGGTTTATCAGTCAATATCCTGATTTATGTTTAATAAACAGGGTGATGGCATATTTTTATTACC
# Right flank :  ACTTTGCCGCTGTGTCACTCAGGACCTCGGTTGACATTTGATCTTATATACCCAATTTAGTTTTTAGCACTTCGTAAGGTGTTTTTCCACCATGTGCTGAATGGGGGCGATGACAGTTATAAAATGCCTCCCATTCCGCTAGTTTTTCATGAAGGTCGACATCATCCGTATAATCGATAAGCTGATAAAATTCCTGTTTATCTGTCAGATGAGAACGTTCTACTTTTCCATTTAATCTCGGTGTCGCTGGTTTAATATAAACATGCTCCATCCCTAACTCATGCACATGCCAATTAAATTTCGCCTGGAACTCATGGCCATTGTCTGTCCTGATGGTTTTTAGTCGGAAAGGAAATTTATTCACAACGTAATCAATAAAATTAATCGCATTGGCTTGATTATGCCGCTCATAAATTTTTAAGGCTCGTATCCGGGTCGCATCATCAATTGCGGTATATTGAAAACGCTTAATCCGTTGACCATTAGGACTATTAAAAAAC

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCGCTGCCGTGCAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [6,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTCGCTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.00,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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