Array 1 16592-16264 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZOD01000011.1 Ignatzschineria larvae DSM 13226 YWGDRAFT_scaffold_8.9_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 16591 28 100.0 32 ............................ AACAATAATGAGCGATTGCCACCTTTGCAACA 16531 28 100.0 32 ............................ TATTTGTGTTGTTCTAGGTAGATCTTTTAAAA 16471 28 100.0 32 ............................ AGTACAAGAATTACTACAGATATAGAAACTGA 16411 28 100.0 32 ............................ CCCTTTCTTGTATCTCTTTAATATTGTCAAAA 16351 28 100.0 32 ............................ TTCTCCAAACGCAAGTGGACTGACCAACATAA 16291 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 100.0 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : AGGAAATGTTTATATTGAATAATTTACTCGAACCATAAAGAGAGAAATTACTATCGAATTATCTGTGTAAAACCATAAATGATGCACAAATGAACCCCATAAAATGGTTGTAGGATTATAGTAGCGAAGGGCCATATTGAGTTATTTGATGATGACGGGCTATTTTTATCTATGCCTTAAAAATCCTCTATTTTTAAATGGAATTAAATAAGGGGGAAGATGATATTACTTTTAGTTAATATTAAAAAGGAGAGAGTTACATAAGCGCTTTATTAAAAAAGGAAGTTATCAGTAATGAGATAAGATATTCATCAAACACGCTTTACAACTTATGGTTTATCTGCTGGGAGAATTGTTCCCGAGTTTTAACCATTATTTTTTGCTCTTTAAAAATTTGAATATAATTCAATAGGTTATAAAAAAAGGAAAAATCATTGGTATTTTAGGGTAAAATGATCCTTGAACTAGATTTTTCCTTTCTTTTTGGATTTTAATCTATT # Right flank : CTTACTATGACGTAAACTAGATCATATTTTGAAGAATCAGAACAAAAAGATCTTGATCAAAAGACATGACAATAAATGGTTATGAGGCATCGTAAAACTCACGAATAAAAATGAGCTCTATTTAGATACGGTGTTCTTTACAAGAGATCGGGAAGTTCAAAAAGAACTAGAGAGATAGACTCATTTAAAAACGATAGACGATAAAAAACCTTAGAAGGTAGAGCTCCCACTCATCTACACATGGATCATGTCTTGTGACAAGGCCTACGGCAGGGAGATTCACCGTGTTTCTTCTAAGGTCCATCTTTATAATAACGAATATCTAAGAAGGTGACAATATGATTGATATTCAATTCATCATTGATTCTAAAGAGTTACAAAATCAGTGAGATCAATTAGCTGAGCGATGTACTCAGCGCCAACCACTGATGAGACAGATTGCCGGAATGATGGAAGCTGGTGTACAAGATAACTTTCGTGCCGGCAGTCGGCCAAAGTGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.10,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 7-874 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI783331.1 Ignatzschineria larvae DSM 13226 YWGDRAFT_scaffold_16.17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 7 28 100.0 32 ............................ ATCACGGTTTGCGGGAACTTTAGACTGAGAAA 67 28 100.0 32 ............................ TGTTAAACGAGTTACTGCTTGCGGGAATAATA 127 28 100.0 32 ............................ TCTCGCAAAAGCCGTAAATCTCGCTTTAGAGC 187 28 92.9 32 T................T.......... CTCAACAAACTCATGATCTAAACTAGGCGGTG 247 28 100.0 32 ............................ ATAATCGACTTTTCAATATTGACGTTCGCTGT 307 28 100.0 32 ............................ TTCAACATATCGACCCATATCTAAGCCGAGTG 367 28 100.0 32 ............................ TCAAGGTCAAATCGTTGCAAGCGTTAGCGCAG 427 28 100.0 32 ............................ ACCATAAATCTTCTGATTCATGATTTGTAGAT 487 28 100.0 32 ............................ TTTATTTTTGATTGCTTAGTGATCCGCGCGAT 547 28 100.0 32 ............................ ACTGTAATTTAAGATCAATTTCGCTACCGGTA 607 28 100.0 32 ............................ GAAGACTTCGTTTGTTTTTTTGTTTGTGTAAT 667 28 100.0 32 ............................ TAATATTTCAAAGAAGGCTGAATTAGTATCGA 727 28 100.0 32 ............................ GGAACTAAACGGCGACCAACCGACATTTATGT 787 28 100.0 32 ............................ TCTTTCAGCTTTGCCACCGCCTTCCGGACAAC 847 28 82.1 0 ......C...GA.C....G......... | ========== ====== ====== ====== ============================ ================================ ================== 15 28 98.3 32 GTTCACTGCCACATAGGCAGCTTAGAAA # Left flank : ATCTATG # Right flank : AAGATTTAATTTTTACTTATGGAATAACATAAAAAATTTTTATGATTATAAAGGAGTTGAAATATGAAACTGAAATACACACTCATTACTAGTACAAATCCAGCAGATCTGGGCATTCCGTTTGTTGCAGTTGAAGCGGATGATCTATCGCTTGTGTTTGTAGAAGATGCGATGAGTCCAGAGGATGCAATTGCAAGTATGATTGATGAGATGGAAGAGCCGGAATAATCTTGTTTTGATCACTATCATTTAATGATAAATCTAGCAATTTTAATAAGTGCAATTTTATTAGAAATTAATTACTATGAAGAGGCTTTAGAAGAAACACGGTTAATCTCCCTGCCGTAGGCTTAAATAGTTAAGTTTCACTATTTATGACCGCGTGTAGATGTGTGGGAGCTCTACCTTCTAAAGCATCACTATTGAGTAATAAAATTCCCAATAAAAAAGATCCCGCCGATTGGCGGGATCTTTTTTATATTCTATTTGGAATATGAGAA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCACATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCACATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [8.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 50110-50797 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI783332.1 Ignatzschineria larvae DSM 13226 YWGDRAFT_scaffold_17.18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 50110 28 100.0 32 ............................ AATAGCATCTTGCGGATATCAGCCAAAACATG 50170 28 100.0 32 ............................ GGATCTCATCGCGACCAATCAGTGTATAAAGC 50230 28 100.0 32 ............................ TTTGTTCTTCATGATAGGTTCAAGGGCATAGC 50290 28 100.0 32 ............................ GTAAGACGTTTTGAGCGCTTCCATTGCATTTT 50350 28 100.0 32 ............................ TTAATTAAATTTTCTTTTAACTCATCAGTCAT 50410 28 100.0 32 ............................ AGTCAATAAACATAAGCAACCACTCTCATAAT 50470 28 100.0 32 ............................ AATCTAATAAAATAATTTCACCAGGAAGCAAG 50530 28 100.0 32 ............................ CACAAAAAATAGTTTAATTTTTTAAATAAAAC 50590 28 100.0 32 ............................ TTTAACATTTATATAAAACATTTTTAAGCAGA 50650 28 100.0 32 ............................ ACAAGGCGAAAAGAAGAATTTAGTGAACACGT 50710 28 100.0 32 ............................ GATGTTTAAATCTGAAAAGATGGATGGCGAAA 50770 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 12 28 100.0 32 GTTCACTGCCACATAGGCAGCTTAGAAA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG # Right flank : TCAGACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCACATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCACATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-6.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //