Array 1 187214-182764 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABXNZ010000003.1 Klebsiella pneumoniae strain LABACER 27 LABACER27_3.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 187213 29 100.0 32 ............................. CGATGCCGGATCCCGAGTTTATCCCCGCCGGT 187152 29 100.0 32 ............................. ATATTAAAGGTTTTAATGCGATCTACCTTTAC 187091 29 100.0 32 ............................. ACGGATCAGTAGTTACTGACGGATCGCCCCCA 187030 29 100.0 32 ............................. CTGTGCGAGTTCGGCATGACACCGGCCAGCCG 186969 29 100.0 32 ............................. GAGGGGGCCGAGGGAGCAGTGATCAGCAACGT 186908 29 100.0 32 ............................. CCAAACACAGATTTTCGTAACGTTATCCGGGT 186847 29 100.0 32 ............................. TTTTTTTTCGATCCCCTCCCCACCACTAAACG 186786 29 100.0 32 ............................. CGCCGTTATCCAGAGCAAATGACTGAGTAACC 186725 29 100.0 32 ............................. GCCAGAGCGGTGAAGCGCCAGCGCCGCGCCCG 186664 29 100.0 32 ............................. TCGCTCACCCTGAGCCGCCAGACCGGCACGTG 186603 29 100.0 32 ............................. GGCCCCAAAGGCGAAGAGGCACCGGCCTACGG 186542 29 100.0 32 ............................. CAATGGTGATGGACTATGACCGATAGCAGCGT 186481 29 100.0 32 ............................. CAATATATGGTGTGCTGACGGGCTGTAAAAAT 186420 29 100.0 32 ............................. GATAATGACTGACAATATCTTACCCGCTACCG 186359 29 100.0 32 ............................. GTATTGATAACCTTTAGGATTTATAGAAATGG 186298 29 100.0 32 ............................. TGCTTCCAGCATTTCCGGTGCTGAGGCGATTA 186237 29 100.0 33 ............................. TGGTGCCGCTGAAATTAGCGCCGCTTACCAGGC 186175 29 100.0 32 ............................. CCCTGCGGTGCGCCAGTTCCCTTATTGGTGGC 186114 29 100.0 32 ............................. GCGCAACTTAAACTGTGGGTCTTCTCTGGACA 186053 29 100.0 32 ............................. ATCAACTGATTCGCTCAGCCTGGGAAGATGCA 185992 29 100.0 32 ............................. AATCTGGCACTCGCTTCCGGTGATATTCTCTA 185931 29 100.0 32 ............................. CAGAAAGTCACTTAGCATCGCCTTTCTCCTGT 185870 29 100.0 32 ............................. TCCTATCAGACCAGGATTAACCCGCCTTTCCT 185809 29 100.0 32 ............................. GAATTTCAGTCCAGAAATATTTATCCAGAGGA 185748 29 100.0 32 ............................. CTGGTGGAGCGCGCAGAACTGTATTCGACAAC 185687 29 100.0 32 ............................. GTGGCCTTTCATGACCGTTTCCGAGCATGGAC 185626 29 100.0 32 ............................. CACAGTCTGTTTTCCAGAATGTGCATGGTGCA 185565 29 100.0 32 ............................. TCATCCAGCAGGACAAAGCCAGAAAACTCTTC 185504 29 100.0 32 ............................. CAACTCCGCAGCGCCTGGGAGGGGTTTCGGAT 185443 29 100.0 32 ............................. CTGGTCCCTTTCTTGAATCCGCCGGATGCTGG 185382 29 100.0 0 ............................. - Deletion [185354] 185353 29 82.8 32 ...CGTG.G.................... TACACAAAAACGTTTTACAGTTGCGCAGCGCT A [185343] 185291 29 100.0 32 ............................. TGCGCGGCAGAATCGTCGCCGTCCCGCCCGGT 185230 29 100.0 32 ............................. CAGGTCATGATGAAGACCTATCCGCTGGCCGA 185169 29 100.0 32 ............................. GGATTCACCTCGACCTGCTACGACGGACAGTA 185108 29 100.0 32 ............................. GCGACGGCGTGGATAGTCGGGATTTCACGCTA 185047 29 100.0 32 ............................. CCGGTTGACCGCACGGCGCCAGCGCGCCCCTT 184986 29 100.0 32 ............................. GCCGGCAATTTCTCGTTGAGGGCGCAGTTCAG 184925 29 100.0 32 ............................. TTGAACGATTCGGTTACCATCGCCTCCTGCGA 184864 29 100.0 32 ............................. ACACCCGAGATTTACCTGTCAGCCAGCGGCGG 184803 29 100.0 32 ............................. TAATGAATAGCAATTATCCATTTTTAGTAGGG 184742 29 100.0 32 ............................. GCTGCGTTGCCGTATTTACTCGCAGCGGTGGT 184681 29 100.0 32 ............................. CTGTCGGCCCGCCAGCGCTCAATAGGCGCTAC 184620 29 100.0 32 ............................. TGTTAGCTGAGTGTCGCCGGCACCGATATATT 184559 29 100.0 32 ............................. GGAAACCAGTTGCCGATATGCCCCGTAAACGC 184498 29 100.0 32 ............................. AACTCATGACGGGCAAGCGGGTCGCCACCGTT 184437 29 100.0 32 ............................. CGCTCTCTGGTATGTACTGCAACGTGCGATTC 184376 29 100.0 32 ............................. GTAAATAACGATTATGCACTAGAGGAGTTGTC 184315 29 100.0 32 ............................. TCATGCAGCAGATACAGAAAAAGGCTGGGCCG 184254 29 96.6 32 ............................A TATGCAGGCCGCAATTGCCTGTAGCTGCTGCC 184193 29 100.0 32 ............................. GGTGGAACCAATGTCGCCAAAGCAATCGGAGT 184132 29 100.0 32 ............................. AACTGTCCGACGTGGTCGCCGGTCGTGATATG 184071 29 100.0 32 ............................. GGGATAATCTCAGAGTGTAAGTCATTGTCACA 184010 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 183949 29 100.0 32 ............................. TTATTATATCTTCACGGTGAGGGAATGGTCCC 183888 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 183827 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 183766 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 183705 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 183644 29 100.0 32 ............................. TGCTAACCGGCACGTTTACCCGGACGAACACC 183583 29 100.0 32 ............................. CTGATCCCCTCCAACAACACGCCAGGCACAGC 183522 29 100.0 32 ............................. CGGTTAGCAATCCCGGGCACGCTATGGATACC 183461 29 100.0 32 ............................. CGGGGATCAAAAGTTGCCACACCGTCAAAATG 183400 29 100.0 32 ............................. GGGCTGAATGGCGAAAATATTGGCGATCTGTT 183339 29 100.0 32 ............................. TCGACGGTAACCCGTGGAGCAAACTGGAGCCG 183278 29 100.0 32 ............................. GAGGCACTGGGTGAATTATATGTTGAGATTGA 183217 29 100.0 32 ............................. CAGGAAAAGGCGATACAAAAGGCAGTGAGCGA 183156 29 100.0 30 ............................. TGCGGCATCGCTCTTCATGACTGGCGATAT 183097 29 96.6 32 .....T....................... AGCTACTGGCCGCCAGCCACTGGATGACGTTG G [183093] 183035 29 100.0 32 ............................. CCGTGAGCCGTGCTCCTCGGTCGCCATCCCCA 182974 29 100.0 34 ............................. CGAACCAATAAGCGCCCCTTGCCGAGTGACTCCC 182911 29 100.0 32 ............................. GGATTTCCATCTCCGGCGTCTGACTACGTTGA 182850 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 182792 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================== ================== 74 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGTGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGACCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //