Array 1 181314-179090 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSFV010000007.1 Klebsiella pneumoniae strain GCKp21 NODE_7_length_251674_cov_58.529951, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 181313 29 100.0 32 ............................. CTTGAGCAAGGCGCTTTTTCTCCTGGGTGACA 181252 29 100.0 32 ............................. CAGCGCCTGGGAGGGATTCCGGATCCAGGTTA 181191 29 100.0 32 ............................. GCGTGGACACGGATGTAGTGCTGGAGAAGGCG 181130 29 100.0 32 ............................. TTTACGGAATTGCTTAGGTCGCGAGAATGTCG 181069 29 100.0 32 ............................. TAGTCATTTGCCGGTGACGGGAACCCCATAGC 181008 29 96.6 32 ................T............ ATTAAATAATTCGTTTACGTCCATGACGAGAT 180947 29 100.0 32 ............................. GTAATCCTGATATTGGCGTATCAATGGTCACG 180886 29 100.0 32 ............................. TGCGGGCCACCAGGGTTGCAGGGTATCAATGG 180825 29 100.0 32 ............................. GCCCAGATCGGCTTTTCATCCCGAAGCCGGGC 180764 29 100.0 32 ............................. GACACCCGCACGCGCCGGGCAGGCGTGGAACT 180703 29 100.0 32 ............................. TCGTCGGGTTTATTGAGTATTCCGCCTGATTT 180642 29 100.0 32 ............................. CAGGTCAGCGCAATGTTCCGGGATATCGAGGA 180581 29 100.0 32 ............................. ATGACAAAACCAAAATTGAGTTTTGGCTGCAG 180520 29 100.0 32 ............................. TTGTCCACTTCACGCCAGTAGTCTTTAGAGAT 180459 29 100.0 32 ............................. AATGGAGGTCCGGTTACTGCTGGAAATGTTTA 180398 29 100.0 33 ............................. ATCCCCACCACCGGCGCTGGCGAGTAGTACCGC 180336 29 100.0 32 ............................. GATTGTCTGACAGATAATGCAGCGCAATGCGC 180275 29 100.0 32 ............................. ATGTGAATTTCCTGGCCGGTTGGTAGTTTGAA 180214 29 100.0 32 ............................. TACTGAAACGGGTAATCAGCACAAATACCAAA 180153 29 100.0 32 ............................. CATCGCTTTATGCCGAAATGAGGATGATAGTG 180092 29 100.0 33 ............................. GAGCTTTCCTCCTCGTATCACTACCGCGCAGAC 180030 29 100.0 32 ............................. ATCAATTCCCTCATTTTTTTTCCTTTAGCTCG 179969 29 100.0 32 ............................. AGGGTTTCGATTTTATCGGGATAGAAATGAAT 179908 29 100.0 32 ............................. TGGCGGACGTTGTACCTGTGAGTTAATTCTTC 179847 29 100.0 32 ............................. ACCGCTCCTCTGACGCCAGGAGGGTGTAGGAG 179786 29 100.0 32 ............................. TCCAGGGGCAAAGAATTGCCCATTATCGTACA 179725 29 100.0 32 ............................. TTTGCAATATCTGCCTGCGCCGCCGCCAACGT 179664 29 100.0 32 ............................. CTCGGATAAAATGCCTTGCATGAGGCGAACGA 179603 29 100.0 32 ............................. GCGTCCAGTTGAACCCGGCACATTCCCGCTGG 179542 29 100.0 32 ............................. TACGCAGCCGGATCCAGGAGCGCATGGACGCT 179481 29 100.0 32 ............................. GCACGATATTCAGCATCATCAGGACGGTTCAT 179420 29 100.0 32 ............................. ACCTACCAGATCCACACCGGGCGCTGCGAAGA 179359 29 100.0 32 ............................. TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA 179298 29 96.6 32 ........T.................... CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 179237 29 96.6 32 .....A....................... TGCGTCACGACGCCGGCGACAGTGACATCGTC 179176 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 179118 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 37 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACTGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //