Array 1 13236-13998 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PTZV01000046.1 Enterococcus faecalis strain CVM N54553 N54553_S35_L001_R1_001_contig_46, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence              	Insertion/Deletion
==========	======	======	======	=====================================	=============================	==================
     13236	    37	 100.0	    29	.....................................	GATGCCATTGAAATAAGCAGAATTAAGTA	
     13302	    37	 100.0	    29	.....................................	TGTTTTCATTGAAACGTGTTTCTCTTTGT	
     13368	    37	  97.3	    29	....................................T	AAGTTCAACAGATTCCGATGGAGATGTAA	
     13434	    37	  97.3	    29	....................................T	ATTCAAATTGGCGTTTTGCCATTAAATAC	
     13500	    37	  97.3	    29	....................................T	TGCTGCTAGATGTCGTGTTGGCCAGCCGA	
     13566	    37	 100.0	    29	.....................................	ACCGAACTTACACCAACTGCGGATGGTAT	
     13632	    37	  97.3	    29	....................................T	ATCGAAAATGATGTATTAATTTTAGGCTA	
     13698	    37	  97.3	    29	....................................C	CAATGATATATTATTACGCGCAACTGATA	
     13764	    37	  97.3	    29	....................................G	TTGGTACATTATCAATAACGAAGGTAGTC	
     13830	    37	  94.6	    29	....................G...............T	GATCGTGGATTTTCTGACAGGTTGGATCA	
     13896	    37	  97.3	    29	............................G........	TTACTTGTTAAGGCTTCAATTATCAATTC	
     13962	    37	 100.0	     0	.....................................	|                            	
==========	======	======	======	=====================================	=============================	==================
        12	    37	  98.0	    29	GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA	                             	       

# Left flank :   CATATATCCTCATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATGATTGGCTTTGCCACTTTGCAAGAAAATACCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCACAAACTTTACAAGAAACCTGGGCAAGGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTATAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAAACCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAAATCAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATAATTCTCCGAG
# Right flank :  AAACTTTTTTGATTTGGCTTTTTCTCCCCTGTTTTATAGTCATGTTGTTTAAAAACAAACTATCACTACAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGACAAGCTGCTTCAATTTTCGAAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGTAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAA

# Questionable array : NO	 Score: 5.70
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.54,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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