Array 1 3-1028 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKRB01000039.1 Eubacterium ramulus strain BIOML-A2 scaffold39_size6253, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================= ================== 3 36 100.0 30 .................................... ATCTTTGCATCTGACAGTCGCAGGAGTGCC 69 36 100.0 30 .................................... ATTCGAACGGCACTGCAGACCGCTCGAACA 135 36 100.0 30 .................................... AAAACTCTATATATGCCACATAAACGCCAA 201 36 100.0 30 .................................... AGAGCAGTAATCCAAAAAGTGTTCTGTCCA 267 36 100.0 30 .................................... GGTACAGTTTGTTTTAAACAGCAGGGTAAT 333 36 100.0 30 .................................... GCTATTTACTTAGGTAACGAATTAATGATT 399 36 100.0 30 .................................... CTATATGGCAGGGTTATCATCTCTTGGTAT 465 36 100.0 30 .................................... ATCTTTGCATCTGACAGTCGCAGGAGTGCC 531 36 100.0 33 .................................... TCNCTCGGTTGACATGTACAAGATCAATGCCCC 600 36 100.0 30 .................................... CTATATGAGACGCACAAAAGAGCAATTAAC 666 36 100.0 29 .................................... TTTACGTTTCACGGTTGGTTCAACCACCT 731 36 97.2 30 .............A...................... TGAGATCATTTTTAAAAATGAAACCTTTTC 797 36 100.0 30 .................................... CAAAATATGGATGTGTTGAAGGAAACAAGG 863 36 100.0 29 .................................... TCTTGAATAGCTTATAAGATAAAGATATA 928 36 97.2 29 ..............................T..... ACCACGTCCATCTTCCGGTCCTGCATCTA 993 36 91.7 0 .C.........................A..T..... | ========== ====== ====== ====== ==================================== ================================= ================== 16 36 99.1 30 GTTTGAGAACCTTGTAAGTTTGTAATGGTGCAAAAC # Left flank : ATG # Right flank : CGTTTATGAGAAAATCATAACCGTAGACACTGTTTGAGAAGCAATGTTTTCTCGGCTGGTAAAATAGCTTTCCGAAAAAGAGGGCGTAACGGAAGCCCTCAAAGCGGAAAATCAAATGCTGTGGGTGCAGAGGATGAACAACATTCGCAGTGTTACTATGGAAATCGTTTTGAGTGAGCTTATATACTGTTAATACTATGCAAGAAAAGTCGCTGTCAACAGACGGCGGCTTTTCCTTTTCGGGTAGTATTCAAGAAGTCATAAAGTTCTGTGAGTAATGGAAGAAGCCGGCGTTTGCGGAAAAGTCACAATTTACGGAGGTAAAGCTTCAAATACACTTGCCTTTTTGTTCTTACTATGATATTATTAGTACACATACTAAAACATTTGATGGGAGGTGATGTATTTGCGGAGAGATAGCAGTGAAACAAAGAGGAAAATACTGACCGTGTGCGTCCGTCTCTTTTTGGAGCAAGGGTATAAAAACACCTCTGTCAGTC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAACCTTGTAAGTTTGTAATGGTGCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.30,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 91573-92009 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKRB01000006.1 Eubacterium ramulus strain BIOML-A2 scaffold6_size157040, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =========================================== ================== 91573 26 100.0 43 .......................... GCTGTCGTATACCAGTCCTGTGTAACCGAAGTTTACAGCACCG 91642 26 100.0 43 .......................... GCTGTCATTGTACAGTCCTGTGTAACCAAAGTTAATCTGGCTG 91711 26 96.2 43 .....................T.... ACTGTCATATACCAGTCCTGTGCGTACAAATGTGATGGTGCTG 91780 26 84.6 40 ..T..................T.C.C ATTTGCTGTCAGACCAGTGTATGCAAATGTGATGGTTCCA 91846 26 100.0 43 .......................... CTTGTCATTGTACAGACCTGTGTAACCAAAATTGATATTGCCA 91915 26 96.2 43 .....................T.... GCTGTCATATACCAGACCTGTGTAGCCATAGTCGATGGTTCCG 91984 26 69.2 0 CCAA.C...............T.C.C | ========== ====== ====== ====== ========================== =========================================== ================== 7 26 92.3 43 TTCTCTACATACCACCAGCCACAGTT # Left flank : GTTCTGCCTGATTGGCGGAATCACCTGCATTAATATTTGCATTTCCGATATTCGCCAACTGATCCATGTCCATATCCAGCGTAGAGGAAAGCAGATACATCCGTGATGCATCCGCACGGTTCCTGTCCATGGGATTTTCCGGGGCTGTCTTTCCAAAAGAAATCATCAGCGCCAGAAACAGAGCCACAATTCCGGCTCCCGCCAGTGCTCCTCTTATTTTCTTTTTATTTTTTCTGTTTCTACTTCCCGGTCTGTTCATGAAATTCCCCTGTTTTTTTGACAAAAGCAGGTTTGTTCCGGCTGCAAAGTCCGAAACAAACCTGTTTTTTACTTCCTTGTGTCCATCTAAATGATGTGTATGCAATAATTGTCAGATAATTATTCGCAATCTGCCAACGCTACTTGCTTATTCACGTTAGAATCTGACTGCTCCTCCAACTACATTCCATACACCGTATGCATTTCTTACAGTTCCTGTATACCCAAAGTTGATGGCACCG # Right flank : CACACTCAGCGAGCCCTGTGTAATCAAAATCTACCGCACCGTCTTTGATGTACCACCAGCCGCATACACTGTCATTGTACAGACCTGTGTACTCAGCATCTACTTTGCCGGCTTTGACATAATGCCATCCGTAAACAGCATCGTTGTAAAGTCCGTTGTAAGTAGTATCTACTTCACCGTCTTTTAAGTAATAGAGACCGTCTTCTCTCTCCTGAAGACCTGTAAACTCTCTTGCTTTATCTCTGGTTGTTACATGTGCAGTCAGATCAACCGGAGCTGTGCTCTCATTGCCGTCCGTGAAATACAGACCTTTGATCGCTACTTCTACCGGATCATCTACATATTTTAATACTTTAAATTTTAATGCAAACGTTGCTTCCGAGAAGGTAGTATCTTTTGCAGATGTCAGGTAAGAGAAATTTCCTCCCGCAGTGGATACCATCGCTTTCTCCGGAAGATCTTTTTTCTCAAGTCCCTCAAATTCCAGTACAGTTTCATCG # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCTCTACATACCACCAGCCACAGTT # Alternate repeat : TTCTCTACATACCACCAGCCATAGTT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 52307-52474 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKRB01000018.1 Eubacterium ramulus strain BIOML-A2 scaffold18_size52507, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 52307 37 100.0 28 ..................................... TGAGATGCTGCACTACGTAATGAGCATA 52372 37 100.0 29 ..................................... ATGAGGAAATTATGAAGAAATTTATAATT 52438 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================= ================== 3 37 100.0 29 GGTTTGAGAACCTTGTAAGTTTGTAATGGTGCAAAAC # Left flank : CAATAAGAAAATACTGGGTAAGTTGTTTCAGGAATTGAAAACTGTTTCGATGGAAGAGCAGTATGCAGAAATATGTGAATTGAATGCTAAAGTTGTTCATTATTTGGATGATTTAAATTTAAAAATGCCATATCCGATTCAATTTCGACTGGAGTTAGATGTACTTGATCTTTATAAAATATATGGGGTTCAGTTGGATACAGAAGAAAGTGATATGTTTGAACGGCTCTTGGAGTATGTCAAAGTACTGAAATCATTGTGTGGAATTCGCTTGCTGGTATTTATAAATGTGAAAAATTATTTGTCAGAAATGCAGATAAAAGAATTGTACAAAACAGCATTTTATTATAAAATAAATTTATTATTAGTTGAGGCACATCAAGGGAAAAATTTAGAATGTGAAAAAAATCAATTAATAGATGAAGACATGTGTTTTATACATTACTAGGTGGCTTACGCATATTGACCGATATGTTCGGTTCGGTGATGATCTCATTTGA # Right flank : ATTCGAACGGCACTGCAGACCGCTCGAACAGTT # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTTGAGAACCTTGTAAGTTTGTAATGGTGCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.30,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //