Array 1 62735-56284 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGQDE010000010.1 Ideonella sp. 4Y11 NODE_10_length_183402_cov_49.030975, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 62734 28 100.0 32 ............................ AACGGCGTGGTTACTGGTTGGTACGCGGGTAA 62674 28 100.0 32 ............................ GTTGAGGCTCCGAAAGTCGCCGAACAGTTCGT 62614 28 100.0 32 ............................ ATGCCCAACGCTGCCCCCAAGCCCTGCCAGGA 62554 28 100.0 32 ............................ ACACCCAGCAGGCCGAGAAAATCAACGCAACC 62494 28 100.0 32 ............................ AGCCGGGAGCACCACACCCAGCAGGCCGAGAA 62434 28 100.0 32 ............................ AGGTCGGGGCCCACGGAGTAGCGCACGGTGCT 62374 28 100.0 32 ............................ TTGCTGTCATCCGGGTGGATGATGAGCGTGAC 62314 28 100.0 32 ............................ ACCTGGACTAGTCGGAGTGGATTCTTTTTCCC 62254 28 100.0 32 ............................ ATCACCCGGCTAGCCATCACCCGGCTAGCCAT 62194 28 100.0 32 ............................ AGCGGGGCTGGCGTGCGTGACGCGCTCACCGT 62134 28 100.0 32 ............................ TCAAGCGCAACATGCTGGCGGGCCTGTTCCGG 62074 28 100.0 32 ............................ ACATGCGATCCCGAGACGGGACAACGTGCAGC 62014 28 100.0 32 ............................ AGCCGCACCAACACGGCCAACGCCGACCGCGC 61954 28 100.0 32 ............................ TATCAAGCCGCGTCGCGGCGCTCGATGTTCTC 61894 28 100.0 32 ............................ AGTGACGGCCTGCACCCCTCGCGATACATCAA 61834 28 100.0 32 ............................ ACCGTGCCCAGCGCGCCAGCCACCCCGGCCGA 61774 28 100.0 32 ............................ ACCAAGGCGCGGCCAGCGCGACCGGCGACCAA 61714 28 100.0 32 ............................ TCAACGCCTACGCCGACGCCGGCGACCACCTC 61654 28 100.0 32 ............................ ACACAAAGCCGGTGGTGGCCAGGTAGAACACG 61594 28 100.0 32 ............................ TGACCGACGGCGGCTACCTGATCGTCAAGAAC 61534 28 100.0 32 ............................ AGGTAGGCGTTGCCGTCGTTGAAGAGGACGAA 61474 28 100.0 32 ............................ GGTGTAAGTCCAATCAGCTTCCGGGATCGAGT 61414 28 100.0 32 ............................ TGCTCAGTGCTGGCGCATAGGAGCCACGCAGC 61354 28 100.0 32 ............................ GTGCTGCTTGGCCTGTAGGGCGGCCTTGAAAA 61294 28 100.0 32 ............................ ACTCGGCCGCGGTGGCCTGGGCCTCCTTCAGC 61234 28 100.0 32 ............................ TTGTCCAGCGCTTCCTTCTCATCCGTGTCGTA 61174 28 100.0 32 ............................ TTCTCGGCCGGTGGCCTGTCGTTCACCCTGGC 61114 28 100.0 32 ............................ TCACTGGGACGCTCGCGGTTGGTGGCCTCACG 61054 28 100.0 32 ............................ ACGTCTCGTACTGGCTGAAGAAGGGCCTGCCA 60994 28 100.0 32 ............................ AGCACTAGGGGATTCGATGTCGCATCTACGAA 60934 28 100.0 32 ............................ ACATGGTGCCAGCGGAGCCGCTGCGCCAGCAG 60874 28 100.0 32 ............................ AACGCGGCGCGCAGCACATAGAACGCCAGCCC 60814 28 100.0 32 ............................ AGCGAGCTGTGGGGCCCCACTGCCCAGCAGAT 60754 28 100.0 32 ............................ TGCAGGATGCGGCTGAGCAGGTCACCGGTCAA 60694 28 100.0 32 ............................ ATATGACGCAATAACGCCTATCATCGCGCTCC 60634 28 100.0 32 ............................ GCCCGAGGGGAGAAGGCCCAGGCTGACACGCT 60574 28 100.0 32 ............................ TACCGGGCCGCGGCGTTTCCCGAATGGTCCGT 60514 28 100.0 32 ............................ CTGAAGAGTGGCGCGACAACAAGGCGGTTGAG 60454 28 100.0 32 ............................ AGGTCAAGCGCGCGTTTCTGCCAACTGAAAAT 60394 28 96.4 32 .......A.................... TCGGTAGACGCCTTGTAGGTTTTGCTCGCTCA 60334 28 100.0 32 ............................ ACACCTTTGTGGTGGCGCTGGAGGCCATACGC 60274 28 100.0 32 ............................ GAGCGCGACCAGCACACGAGCAACAACGGCAC 60214 28 100.0 32 ............................ TTGGGCAGCAGAAGACCTTGTTCGATCGTGCC 60154 28 100.0 32 ............................ ATCTTCCGGCCCTGCCACATCCGCAGCACGTC 60094 28 100.0 33 ............................ ATCCACCCGCGTTGAAACGGCCACGACGACCAC 60033 28 100.0 32 ............................ AAGCGCATGGAAGTCGGCTACGCCGGTGTGCC 59973 28 100.0 32 ............................ TGGCCCGCGGCCAGGAAGGCCTGCACACGGAA 59913 28 100.0 32 ............................ AGCGAGAAACCGTCGATGCCCTTCCGATGGAT 59853 28 100.0 32 ............................ TCTGGAGGCCGCCCCATGGGCCCCAATCCCGC 59793 28 100.0 32 ............................ AGATGAACTGCGCAAAGCGTCCGGTAAATCAC 59733 28 100.0 32 ............................ ACATCAGCACCGAGCTGCCCCCGCGCTACCTG 59673 28 100.0 32 ............................ TCTGTGGGGTGCTTCGGTCAGACGCTTGGTGT 59613 28 100.0 32 ............................ GATCAACGCAGGGCCGGCAAGCGCCTGGGGTC 59553 28 100.0 32 ............................ TACTGGGACGCCTACCGCGCCGTCAACGCGGC 59493 28 100.0 32 ............................ TCGCCGGTGTCGGCAAACTTTTGGTTCACCTC 59433 28 100.0 32 ............................ TGCACCAGGTCGCGCACGCCCACGTAGTCGGT 59373 28 100.0 32 ............................ AAAGCAATGGCGCGCCCGAGGTAAGGCGGCCC 59313 28 100.0 32 ............................ TCGCCCGAAACCGTGGCAGTCTGCGTGACCAC 59253 28 100.0 32 ............................ AAATCCCTGGCAGGTGGTCGCCCCCAATGTCA 59193 28 100.0 32 ............................ GCCGCGGTGCTGATCGTGTGGGCAACGGTCGA 59133 28 100.0 32 ............................ TACATGGGGTAGGGGGAGGTCTGTCTGGTGAT 59073 28 100.0 32 ............................ TAGCGAAACGCTCTCACGAGCAAAGGAAAGCA 59013 28 100.0 32 ............................ GAGGACGATCTGGCAGTACGGCGCTTCGAGCG 58953 28 100.0 32 ............................ ATCGGCGCGCGCCGGCCGGCGCCGGCAGGGTC 58893 28 100.0 32 ............................ GTGAAGGCCGGCCGCATCCTGCCCGCCCAGAA 58833 28 100.0 32 ............................ GTGGGCGAGCAGTGCGCCCTGATCAGCCCCGG 58773 28 100.0 32 ............................ AACGCCGTACATGCGCGCACCCTGCGGCAAAC 58713 28 100.0 32 ............................ GCTGCGTGCCCTCAGCCCATTGACGTTGCTGG 58653 28 100.0 32 ............................ AGCGTGTCCAGGTTGACCATGTGCGCCAGGCC 58593 28 100.0 32 ............................ GTGGCGACCGTTCAGATACGCCTGCACGCCCA 58533 28 100.0 32 ............................ TCCCCAGTCGCAGTGCCCGCCTTGGATTTCTC 58473 28 100.0 32 ............................ AGGCGGCATGCGGCCGGTTTTGATGGCCAGCT 58413 28 100.0 32 ............................ GTGCATGATGATCGCGGTGGCCATCTTGGCGC 58353 28 100.0 32 ............................ ACATGGCCGATGGCCGCATCTTCATCGGCCAG 58293 28 100.0 32 ............................ AGCGTGTCTCGGAAGGCCTGGAAGAAGCCCTT 58233 28 100.0 32 ............................ TCGCCCGTCTCGGGGTTGACGTGGTAGCCCTC 58173 28 100.0 32 ............................ ACCGGCTTTGTGTGGTGGTTCGGGGTGCGGCC 58113 28 100.0 32 ............................ GTGGGCCAGGAGGGCGAGCTGGGCCGCCTGGG 58053 28 100.0 32 ............................ ATCTACACCAGCCCCACGGTGGTCAACGGCAT 57993 28 100.0 32 ............................ ATGCCGCCTGCCACCCCACCCAGTGCGCTGAA 57933 28 100.0 32 ............................ AAGAGAAGATCACCGGACCGCCAAGCGCTGTC 57873 28 100.0 32 ............................ AGCAGCTGCGCATTGGTCTGGCTGATCTGGGC 57813 28 100.0 32 ............................ AGCTCCGCGATCTGCTCGCCCGATCCAACCTC 57753 28 100.0 32 ............................ TGTGGTCCACCTACAGCTGGGTCACCGACACC 57693 28 100.0 32 ............................ ATGCCGGTGATGGAGCCTTGCAGGGCGCCGGC 57633 28 100.0 32 ............................ AGCAGGGCGGCACGCTCGGGCTCGGGTAGCGC 57573 28 100.0 32 ............................ TCGGCGCGCTTGTCGCCGCGGGCGGTGGTGTC 57513 28 100.0 32 ............................ GTGAAGCGAACCACGGCATCACGCACGACGAT 57453 28 100.0 32 ............................ ATCCCGACCGACATGCGGGGCAAGGTCCAGCC 57393 28 100.0 32 ............................ TTTTCCCCTCCTCTCGGCACGTCGCGCATCGC 57333 28 96.4 32 ....................T....... TTGAGCACACGACGAAACGAGGCCAGAGAGCC 57273 28 100.0 32 ............................ ATGCTGCGCGGGGTGATCGTGGCATCGATCGC 57213 28 100.0 32 ............................ GTCTGGGGCGCGATGTTCCTGTATCGCAAGTT 57153 28 100.0 32 ............................ AGGCAGCGCAGCGCACCGCCGACCAACGCGGC 57093 28 100.0 32 ............................ CTCGCCGTCCAGCAGGCGCTGCAGGTTGCCCG 57033 28 100.0 33 ............................ CGCAAGGGGCCGCAGCATGAGCCGCCCCACCGA 56972 28 96.4 32 .....................C...... GGCGACGACGACCCCGAGAAGCTGGCGCGCAA 56912 28 100.0 32 ............................ GTCGCCGGGGGAAGGCATCATGGGACGACCTA 56852 28 100.0 33 ............................ ATGACCACCGCCCAACTGCGATCCGTCGCCACC 56791 28 100.0 32 ............................ TCTTGCAGCAGTTGGAACTGCGCGGCAGCCAT 56731 28 100.0 32 ............................ TGAACGCCATGCGCACCTGCGTGATGCGCGTG 56671 28 100.0 32 ............................ ACCGACCGCGCTGGGCATGTGTGCTCGACCGC 56611 28 100.0 32 ............................ TAGAACTTATCGCGCGGCAGGACGCCGCTTTT 56551 28 100.0 32 ............................ ACCAGGCCCAGCGCCATGCGCCAGCGCTGATA 56491 28 100.0 32 ............................ TACCGCATCACGCTGAACGGCCGCGAGATCAC 56431 28 100.0 32 ............................ TGCAGGAAGGTGCCCATGGCGTCAGCCGCCAT 56371 28 100.0 32 ............................ ATCGCCCAGTAGCTGCCCGGCGGTTTCGGCTC 56311 28 92.9 0 ...................T....T... | ========== ====== ====== ====== ============================ ================================= ================== 108 28 99.8 32 GTCCACTGCCGCACAGGCAGCTCAGAAA # Left flank : CCGTCGAATTGACGCGGCTCATGGAGCACGATTGGCTCAAAGGCATGCGTGACCATGCCGACGTGCGAGGCATGGCCCCGGTGCCCGCGGAAGCTGTTCAACGCACACTGCGCCGAGTCCAGGCCAAAAGCAGTGCTGAGCGGCTTCGGCGACGTCAAATGCGACGACACAACCTGAGCCATGAAGAGGCACTGCAGCGGGTGCCCGACAGCTGTGCTGAGACCTTGAAACTCCCCTACTTGCGCTTGTCCAGTGCCAGTACAGGACAACGGTTCAAGTTCTTCCTTCGGCTGGGTGCGCCTTGCCCGCAGGCTAGCGGCGAGTTCAATGCCTACGGGTTGAGCACCACTGCGACCGTCCCTTGGTTTTGACCCTTTTTACGCGTTGCCTGGCAAGTGCTTGGGAAACAAGCACTTGCGCAAGGATCCCAGTCTTTGGTGTGCGAGCCTGTCCGCCAGGAAACGTGAGCACTGACAGGTGCTTGGCGCCTCAGACGCCTA # Right flank : GCTTCGCGCATTTCTCGCCCAGGCACAGCGCCAGGCACAGCCGGATGATCGCCACGATAACCATGACTGGCCGCGGAGGCCGGACCGAACCAATCTTCCGGACACCAGCTCGTTGGTATCAGCGACTGCGCGCGTCACCTCAGCGCGCAGGCGTCACATCAATCACCGGCGCCGTGTTCTAGCGGCGTTCCCGCCTAACCTCATCGATCTCGGCCTGGATTTCCTCTTCGGTCAGTTGGCTGGCTCCGCTGGCTGCGGCGCTAGCCTGGATCGCCCTCACCTGGTCGCCCATGCGGCTCAGGCGTATTGCCCGCAACTGCTTTTCCAAGGCCTCCGGTTCGGTGTGAAGCAGCAGCGCGAACGGCTTGCCGTTGCGCGTGATCACGAACTCCTCACCCGCTTCCAGCCGCTGCCAGATATCGGCTGATTGCGCGCGCGTTCGCGCGCGGTCACATAGTCCATGACGGTCCTCAAACAGGTGTCCATCGAATGCGCCACTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //