Array 1 8653-12580 **** Predicted by CRISPRDetect 2.4 *** >NZ_WFJI01000125.1 Klebsiella pneumoniae strain 072A2 072A2_S28_R1_(paired)_contig_125, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8653 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 8712 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 8773 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 8834 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 8895 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 8956 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 9017 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 9078 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 9139 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 9200 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 9261 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 9322 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 9383 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 9444 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 9505 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 9566 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 9627 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 9688 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 9749 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 9810 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 9871 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 9932 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 9993 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 10054 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 10115 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 10176 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 10237 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 10298 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 10359 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 10420 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 10481 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 10542 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 10603 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 10664 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 10725 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 10786 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 10847 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 10908 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 10969 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 11030 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 11091 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 11152 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 11213 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 11274 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 11335 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 11396 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 11457 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 11518 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 11579 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 11640 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 11701 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 11762 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 11823 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 11884 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 11945 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 12006 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 12067 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 12128 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 12189 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 12250 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 12311 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 12372 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 12433 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 12494 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 12552 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //