Array 1 7341-351 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHXBV010000013.1 Halomonas sp. ANAO-440 y02_R1_contig_13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 7340 28 100.0 32 ............................ TCCTAGGGATCTGCGCACGTGGGTTTCAGCGG 7280 28 100.0 32 ............................ ATCAGCCTGAGCCCCGCCCTGGAGGACCTGGT 7220 28 100.0 32 ............................ GTCACCGGCGACATCGCCCACGCCCTCAACAC 7160 28 100.0 32 ............................ AAGATGCTTCTCGCCGCCGCGGGCTATCTGCT 7100 28 100.0 32 ............................ AGCAAGGAGCCCGCGAGATCGGCAGACAAGAA 7040 28 100.0 32 ............................ AGCAGGCGGTCACTGGGCGGCAATGCCGAGTA 6980 28 100.0 32 ............................ CAGTCGTCGAGCGCCTCGAGGTCGCGATCCTC 6920 28 100.0 32 ............................ AGAGCGACATCATTGGTCGTGTGCGCGTGACC 6860 28 100.0 32 ............................ CGCATCGCCCGACCACATCGCGCTGCTCGAGA 6800 28 100.0 32 ............................ GAAAAGCTCCAGACCGCTCCAGATCACGGAAC 6740 28 100.0 32 ............................ AGGTAGCTGAACCGGGTCTCGATGAACTGAAG 6680 28 100.0 32 ............................ ATCGGTGATGATCAGGTCGCCACTGTTGACCC 6620 28 100.0 32 ............................ ATGATTCGCAGGCAGTCGCTCTTCCTGATGCC 6560 28 100.0 32 ............................ CTGATAACAGTTATATGTCGGTGGGTCATAAC 6500 28 100.0 32 ............................ ATGCAGCAGCATAGCGGCGGTGCTGCTGGCCG 6440 28 100.0 32 ............................ AGCCTCGCATCTTGAAAATTCTGCTCCAATAC 6380 28 100.0 32 ............................ AGCGAGATCGGCGATGCTGATGTCTCCATGGC 6320 28 100.0 32 ............................ AGCAGGCCTTGCCGATGAAGTCTTCGAGCTTC 6260 28 100.0 32 ............................ GTCAATCCGCACGCGATGTGGAACCAGATCAT 6200 28 100.0 32 ............................ CTGGCCAAGCACTACGGCGACCGCGGGCAACA 6140 28 100.0 32 ............................ AGGGTGGCGCGAGCCTGCTGGGCCAGGCCGGG 6080 28 100.0 32 ............................ CGCTACCCGGGTGGTTGGCGGTATGCACGGCG 6020 28 100.0 32 ............................ ATGTCGACGCTGCAGCGGCTGATCGCCGAAGA 5960 28 100.0 32 ............................ GAGAAGGTGGGCAGCCTGATCGATCGTTACGA 5900 28 100.0 32 ............................ AGAAATTGTAGAGGGTACATTAGACACCCTAT 5840 28 100.0 32 ............................ AGGGGCGTTGTGAGCAGGCTGCCTTTCCACTG 5780 28 100.0 32 ............................ AACCACCCGCCACCCATCCCGTCCCGAGAACC 5720 28 100.0 32 ............................ TGCTCGAGGCGCTGGATTGTCGACGCGATAAC 5660 28 100.0 32 ............................ AGGCCAACCGGCATGCCGTGGGTGGCCTGCTC 5600 28 100.0 32 ............................ AATGGCCACCGCGCTGGTGGCGTCATTGAGGC 5540 28 100.0 32 ............................ GGAAGCCGACACGAAGGCTCGATTGCCAATGG 5480 28 100.0 32 ............................ GCGAACAATTCGGCCCAGAGGCCTGGCCGATC 5420 28 100.0 32 ............................ CCAGGGTGCGCACCGGCCCGACAGCGCACACG 5360 28 100.0 32 ............................ AAAAATCTGTAACTCCGATATCAGTGATTGTA 5300 28 100.0 32 ............................ TCATCGCCAGTCGCGTAGGTGTCCGAACTACT 5240 28 100.0 32 ............................ CGAGATACCTGACCAGAGATCGTCACGGATGG 5180 28 100.0 32 ............................ CACAAAGGCGTCTAGCTCAGGGTACTCAGAAG 5120 28 100.0 32 ............................ AATTAGTGCCGTCGCTGCTAGTGATAACAGTG 5060 28 100.0 32 ............................ AGAAATAACAGTGCCGCTATCGCCCACCACAA 5000 28 100.0 32 ............................ CAATACCAACCTTCTTTTCGTTTATTCATACC 4940 28 100.0 32 ............................ AGTCCTCGCCATCGGTGTCACGAATGATGTTG 4880 28 100.0 32 ............................ AGGGGCTCGGCCCGGCGTTTAGGTCTCTGCAA 4820 28 100.0 32 ............................ TTCGGCGCAGCATTAACCGCATATATGACGAA 4760 28 100.0 32 ............................ CACACAAAGGCGTTGATTTCTCTTTGCGTTGA 4700 28 100.0 32 ............................ AATCGCCTCGCCGCCTCCCTCGCTACCCTATC 4640 28 100.0 32 ............................ TGACACAGCAGCGAGGCCGTTCATCGCCGCCT 4580 28 100.0 32 ............................ CTGATATGACAATCCCAGCTCGTGCAGGTAGT 4520 28 100.0 32 ............................ CGCAAGGCGGCCGAGGCTGAGGGCGTCGTCAT 4460 28 100.0 32 ............................ GCCGGCATCACCGGCTACTGGGCGTACTGGTT 4400 28 100.0 32 ............................ ATCCGGGCTGCCCGTCGAGAGGTTGACGAATT 4340 28 100.0 32 ............................ TGCCTCGATGGCTTGCAGAAGCCTACGGCCGC 4280 28 100.0 32 ............................ TAAAGTCGGCTTTGACAGGGAGGCAGTCGCTA 4220 28 100.0 32 ............................ TATGAAAACAGCGGGCATGTCAGATAGGTTTT 4160 28 100.0 32 ............................ TAGCGGGGCTGCGTGGCGTACCAGTGCCTAGC 4100 28 100.0 32 ............................ GTCCGGATCAACGTACTCGAGTGACTCAATGG 4040 28 100.0 32 ............................ CAGTGGGATAACAGCCTCTCGGCCGTGCAGTT 3980 28 100.0 32 ............................ AATGATGCCGCCAAGCGCCGCTCCCTTTGGGC 3920 28 100.0 32 ............................ TCGAGAGTGTGATTGTGGAAAACGCCGTTGGG 3860 28 100.0 32 ............................ CGACGCCTTGCGCATGGATGGCGTGCCCTTAC 3800 28 100.0 32 ............................ TGGCTGAAGGTGCCGAGCAGCTCGTCGGCCTC 3740 28 100.0 32 ............................ AGCTCGACACGCCCGGCGCTGATGTCCGTCGC 3680 28 100.0 32 ............................ CAGTATTTCGAGCTGCGCTGGCCGGGCTCGAC 3620 28 100.0 32 ............................ TTGCGGGAAACGGAGAAGTTAGGAAGTTTAAC 3560 28 100.0 32 ............................ TGCGCCTCCCATGGCGTCATGTGCGTTGATGT 3500 28 100.0 32 ............................ GATGGATCAGAGACGGCTGACGACTTCCGCGC 3440 28 100.0 32 ............................ CGCAAAAGCGTCGACAAATGCTCGGTCAATAT 3380 28 100.0 32 ............................ TTCGGCCATCCGTGCTCGCGCAGCAGGGTGCT 3320 28 100.0 32 ............................ ATACCCTTGTGCGAGTTCTCGTAGAAGCGCTG 3260 28 100.0 32 ............................ TGGGTCGTCTCAGCAAACGCCGGCGCCAGCTC 3200 28 100.0 32 ............................ GTCAGCGTCCGGTGTGAGGGCGTTGGCCTCTG 3140 28 100.0 32 ............................ AGGACGAAGGGCCGTTTCGTGACACCCTGACT 3080 28 100.0 32 ............................ TGCACAACAGATAGCGCATCCTCAAAAGCATT 3020 28 100.0 32 ............................ AGCCATCGAAACGATCACTCATTACCTAACCC 2960 28 100.0 32 ............................ ACTCAGGTTGCGGCGCAGTCCGTTCATGGAAA 2900 28 100.0 32 ............................ GTCACGCTTGTAGATAGTTACAAACGGGGAGT 2840 28 100.0 32 ............................ TTGGCCTCGATGGACTTGATGTCCTTCAAGGT 2780 28 100.0 32 ............................ AGCACCTGCTCGCAACCCAGGCCGAATACTGC 2720 28 100.0 32 ............................ TCGAGGAAGACCTGGTCGGCGATCTTGCGGGT 2660 28 100.0 32 ............................ TGGATAGAAAGAGTCTCAGCATCAAATACAGT 2600 28 100.0 32 ............................ CCATTCTCCTATTCGCAGTCGCATTCGTCAGC 2540 28 100.0 32 ............................ AATGGCTGGGCGTGCAGGGGTCGATGGGGAAT 2480 28 100.0 32 ............................ ATCGGCGGGCGCGGTGAGTGGGGTGCGCTGCC 2420 28 100.0 32 ............................ TGGAGGCGTGCGACCTCGTCGTTGTAGTCGGC 2360 28 100.0 32 ............................ GGCAAGCGGCTGCTCAGGTATCAGTAGTCACC 2300 28 100.0 33 ............................ CAGTCATCGCTAAAGGAGGAGCTTTGCATGAAA 2239 28 100.0 32 ............................ TGGGTGGCGAGAGCCCTGTTTCAACAGAGGGA 2179 28 100.0 32 ............................ ATCCAGCACCATCGTGGTCGCACCCTCGGCCA 2119 28 100.0 32 ............................ TTCTGATTCGCTGCTGCGCCATGGCAAGCCCG 2059 28 100.0 32 ............................ CTCTCTGCTGGCGCCATGAACCGGCGCTCGTG 1999 28 100.0 32 ............................ GATTCGCGTCGAGTGGCAAGACAAGCGAGTGA 1939 28 100.0 32 ............................ AGTTGGCTGCGTGATGGCTGCCCTCCAGCATC 1879 28 100.0 32 ............................ ACAATGCGAGCAAAAATAGATTGACATACTCT 1819 28 100.0 32 ............................ ACCGGCAACAGGTCGCCTGACCTAGGCTTGTA 1759 28 100.0 32 ............................ ATGAGTCGATCACTGGGCACCCTGACGCTCGA 1699 28 100.0 32 ............................ TGGAAGTGGATATCGGAAATCATGGCGTGGAA 1639 28 100.0 32 ............................ ATCGGCTCGTTCATCGGTAGCGCGCTGGGCGG 1579 28 100.0 32 ............................ TCATCAGTGGTGCGCGGATCGCGCATCAACTT 1519 28 100.0 32 ............................ TGGTCGCTCGACCCCAATGTGCTACGCACCCT 1459 28 100.0 32 ............................ GGACGCAACGGCGACGACGGCGCCGAGACGAT 1399 28 100.0 32 ............................ TTGCTCAGTAGTGCGCATCGACTCATCTATGC 1339 28 100.0 32 ............................ AAGTACGCCGAGCAGACGAGCACCCTGACCAA 1279 28 100.0 32 ............................ TGAGACCGCCATCTTGAAACCATCAAGGACTA 1219 28 100.0 32 ............................ AGCCATAGCGTCGTCTTGTTGTCGCCAAAGCC 1159 28 100.0 32 ............................ ACAAGGGCCGCTGGCCGTGAGGCTGTGCATTG 1099 28 100.0 32 ............................ TGCCAGGCGTGGCGCAGGCGGTCGTTCCAGCG 1039 28 100.0 33 ............................ CTCCCAACCGCTGGCTGATGGCGGCGATTAGTT 978 28 100.0 32 ............................ GAGCCGACAGCGCCCACACCCTGTATCTCTGA 918 28 100.0 32 ............................ GTAGCTGAACTCCATCGCCAGGGGGTCGGGGT 858 28 100.0 32 ............................ ACCGAGCACCTGACCGCGCAGAACCTGCCCAT 798 28 100.0 32 ............................ GCGCCGGCCCCGGCGCCACCATCGACACCCAG 738 28 100.0 32 ............................ CACCCGGCTCTACCCGTTCGGCGAGGCGCCCC 678 28 100.0 32 ............................ TCGTTGATGAGGTCTTGCGCTTCAACGAGATC 618 28 100.0 32 ............................ CAGTTGTCCACGTCCCACAGCCCGCCGCCGAG 558 28 100.0 32 ............................ CTCTCTTGAAGCAGGTCGTAGAGTGTCGCCAG 498 28 100.0 32 ............................ AGCAAGCGCTACCTCGCTTCCGTGCTCAACCA 438 28 100.0 32 ............................ ACCAAGAGTGACACTGTTGCCGGCGGCGTCAC 378 28 92.9 0 ....A.......T............... | ========== ====== ====== ====== ============================ ================================= ================== 117 28 99.9 32 GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : CTCGGCTTGAGCAGTTGATGGCGATTTCGTGGCTCACCGGCATGCGTGATCACGTAACGCTTGAAGCCGCTCAGCGAGTACCTGCCGAGGCACAGCATCGGATCGTTCGTCGTCGACAGTTCAATACCGGGAGTCCTAGCCGTTCGAAGCGTTATGCCAAGCGGCATGGCATCGAAATCGAAGAGGCTCAGCGCTTGATGGAAACGCCTGCCGCGCGGCAGATCGCCCTGCCTTTCGTGCAGGTCAGCAGCCGCTCCAGCGGGCAGCGCTTCGCGCTATTCATCGAGCATGGCCAAGCCCAATCGGAATCAGTCGCTGGGCGCTTCAATCATTATGGATTGAGCAATGAGGCAACGGTGCCCTGGTTCTAACCCTTTTTTTGGGAGATTCATTAGATTTGGCAAAATCAAGTAGTTACTAACGCCTCTCTGAAAAGGGAGGCGTTGTTCTATCAAGCCATTGCTCTTTAACAATCAGTCGCTTATCTTTATATCGTTCTA # Right flank : ATATCGGGGCGGGCTCAACGGATGACCCTACCGTAGGGACAGGAGGTGACAATCCGACCTCGCCAGCGTGGGTTCAAGGTTACTCGGTGGAAGCGTGCTCATGAAGAAACTTCAGTGAGGAGCGTGGCCGTTGGTGTTCATCGCCAAGGTTGGCGACACCGTGGTCGCGAGCTAAAGCTGCCTCCAACAGCGTTCTTTTCTTATGTGGATGGACGGCGGCCAGGGGCGTTTCGTTTTCACGCCGTGTCATGGCCGTGGGGAGCGGCGGTGGGGAGTGCCGCGTTGGTGCTCATCGCCAAGGTTTGGCGACACCGCGGTCGCGAGCTAAAGCTGCCTCCAACAGCGTTCTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //