Array 1 2879334-2876415 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045417.1 Halomonas sp. THAF5a chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 2879333 36 100.0 33 .................................... GACAAGGTGATCACCCGCAAGGGTGCGTCCAAG 2879264 36 100.0 34 .................................... CGCTCTTTAACAATCGACCCGCACCAGCTTGGAC 2879194 36 100.0 32 .................................... GCCACGCTCAGCCAGGCCCGTATCGAAGCTGC 2879126 36 100.0 32 .................................... GGATGAGGCGATCCGACTGGTCTACGAGAGCT 2879058 36 100.0 33 .................................... GGTTGGCACTTTCCTCAGTCTCTTCTCTCTCAC 2878989 36 100.0 32 .................................... GAACTTTGGTGATGTGTATGAAAACCTAGTAG 2878921 36 100.0 33 .................................... CAAGTGAGTGTCACTCATACCCCGCCGGGGGTG 2878852 36 100.0 32 .................................... CGTGCTGCCCATGCCGGCAGCGGGCGACTTCC 2878784 36 100.0 33 .................................... GCAGGCCCGTTGCCCCTGGTCTCAGGCGATGCG 2878715 36 100.0 33 .................................... GATGTCGGTGAGGCGATCCCAGCGGCCGGCGGG 2878646 36 100.0 33 .................................... GCGGTCCAGGCCGCGGCCTACAAGACGGTCTAC 2878577 36 100.0 32 .................................... AGGTAGGCCAGGGTGATGGTGGAGCGGTACAG 2878509 36 100.0 32 .................................... TGGTTTTGAAGGTGGCGTTGCACGCGCCCAGT 2878441 36 100.0 32 .................................... GCTGCTGGTCGAGCAGCTTGAGTGCTTGGGCT 2878373 36 100.0 32 .................................... CTGGCTGGCCTCCTCACCATACATGGCGATGT 2878305 36 100.0 32 .................................... CAACATCATCTCCGTGGAGTGAACCATGCTCC 2878237 36 100.0 33 .................................... CCCCCGATCCGCCCGACGCCAACCTCCCGGTGG 2878168 36 97.2 33 .......A............................ CACCGTGGCCAAGCTGCGCAACCGTGTCAGCGG 2878099 36 100.0 33 .................................... GATGTCGGTGAGGCGATCCCAGCGGCCGGCGGG 2878030 36 100.0 32 .................................... GCCCCACGCCGGTGATCTCGAATCGAGGGTCA 2877962 36 100.0 32 .................................... ACGGTCGTAGTGCACCATCGCCCCGGTGATGC 2877894 36 100.0 32 .................................... TTGGGGCCCCGCTTGGCTTTGCTGGGCGCTTT 2877826 36 100.0 33 .................................... AAAGTCATGCGCGAACGCTTGACATTGTGCGAG 2877757 36 100.0 32 .................................... AACGACTCCGAGAGTGTTCGCAAAGTTTTTGA 2877689 36 100.0 32 .................................... CAGCGCAAGTGCAGGCCGTCGCGTTCCAGGCG 2877621 36 100.0 32 .................................... TCGGCATCGGGTCCATGTGCTCCTGGACCTCG 2877553 36 100.0 33 .................................... TCCGCCTCCGGTCCTTGCTGAACCAGAAGCTCC 2877484 36 100.0 32 .................................... GGACTGAGCGAGGCGGCTTGCCTATTCGAGAG 2877416 36 100.0 32 .................................... GGGCGATGCGGTTCGTCCGGCACAGGTTGACG 2877348 36 100.0 33 .................................... TTACCATACGCCACGGCCTGTACAGTGGCGGCA 2877279 36 100.0 32 .................................... GGTCTCTGACGCCTACCTTGAGGGTGTCGTCG 2877211 36 100.0 33 .................................... GCGCAAGCTGTCAGGAAGTGACGAAGACGCTTT 2877142 36 100.0 33 .................................... CCCAGCGCCTTGAAGGGTCGATAGGGCTCCTTG 2877073 36 100.0 34 .................................... AGTCCTGTTTGTGCATAAAATGCACACGAGCACA 2877003 36 100.0 33 .................................... CTGACGCCGTGACCGAATCGCCCATTTTTGCGA 2876934 36 100.0 33 .................................... CGGTGGTGAGGCCCTGCTCAGCCATCCAGCGGG 2876865 36 100.0 33 .................................... GGCCAGTAGTTGTCATCCAACGCCTGCTGGTAG 2876796 36 100.0 33 .................................... ACGGTCACAGTAGTGTCCGGGAAGTGGACAAAC 2876727 36 100.0 32 .................................... CCAGCAGATCGTCGGGCGCGGCCTGCGGCTCT 2876659 36 97.2 34 ...............................T.... GCCACGCTGGACGCTTGATTGAAGGGCGGTTGCA 2876589 36 97.2 34 ............................G....... TCGTTCTCCATGCTCGGCGCCTCGCCGATGATGC 2876519 36 97.2 33 ..........................A......... TTGTTGCGGGTGATGTTGACGTAGACCAGAGAG 2876450 36 72.2 0 ......CTAT.......G.....C.A...G....TG | ========== ====== ====== ====== ==================================== ================================== ================== 43 36 99.1 33 GTCCGATCGCTTCCCTGACTTCCAAGGGATTAAGAC # Left flank : ACTGCCGGTATGCAGCAGTAATGGGGGGCAGAAGCGATGAGCGAGGTACAGTGGTATGTCATCGCCTACGACATTCGAGAACCACGGCGGCTGCGCAAGGTGCAGCGTCTACTTCGGACCTGCGGCTACGCGCTGCAGGAGTCGGTATTCGCCTGGCAGGGCGATCATCGACAGCTGCGGGAACTACAGCGGCGCCTGCGCGCCCTGATCAAAGCAGAGGTGGATGATGTGCGTGGTTATCCTGTCAGGATGGGGCAGGGCATACTCTGGTGGGGGAATCTGCCGTTGCCCAGCGGCGTCATTGATGAGGCCGCCCCGCGGTTTGAACTCCAACAGCCAGTCCGGCATGATGCTTCCAAGGGAGATGCTCTTTAATAGCGCAGTCAGAACCTCGGCAGTGCGGTGGTTGGTCAAAAATTAGCCAACCTGTTGGTCGCTTTTCGATCGTTGCCGTGCAGGAAATAACTTATTGATAGATAAGGATTGTTTTTCAATCTGCG # Right flank : CAAGGCTTACTACGGTAGTAAGCCAAGGCGTGAGTTAGATTGCCGATGTGACTCACATGCAATTACCCCCTCGATTACTGCGGCAGTAAGGTCATCCGGCCAGTTTCCATGACGGTTCGGGCTGCATGGCGGGCGAATCAGCACCGAAAATTTGCCCCGGCCGCCTCGCCCGGGCTTTCTGCCAGGATTGGCACCTCGTAATCAGGCGTTGCCACGACGAGGTGCCACACCATGAGTCGATTCTCCGATGATGCGTTTCCCGAAGCCCCCAGCGTGCTCCCCTATGTGCCGGAGTGGGCAGATGAGAAACAGGTGATCACGAATTACACCGGCTATGACTACGAAGGAAGCGAGAACTTCGAACACGACACCAACGCCAGCTTGGTCAATGCCTCCGGCTGTGCCGACGATATTTTCACGGCTACCGCCGAGCATGAGGACTGGCAGGCTGGCTACGACTATTGACGTGTTGAATTACCTGCTCATGAAGTAGAGTTTGA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGATCGCTTCCCTGACTTCCAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.00,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //