Array 1 26997-25747 **** Predicted by CRISPRDetect 2.4 *** >NZ_VRWR01000046.1 Escherichia coli strain 3_192_1 NODE_46_length_35927_cov_8.763631, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 26996 29 100.0 32 ............................. TTTCAGAAAAGTACGGCTCAATTGATCGCCCC 26935 29 100.0 32 ............................. GGGCTAAAAGACGCGTCGCCGCCAGGCGGCTT 26874 29 100.0 33 ............................. TGGATTAATCCGCGGCTGGCGATATCTCGCAGC 26812 29 100.0 32 ............................. CCCCTGTCGCCGTTGGCGGATTCTTTCCTGTA 26751 29 100.0 32 ............................. GCTGATGACAGATCAAACAGCCGCAGAAGCTG 26690 29 100.0 32 ............................. TCGAGCTGCTGGCGCAGGACGTCGCAATTTAC 26629 29 100.0 32 ............................. CGATAAACGCTCAATACCAGCCGGAATAATCG 26568 29 100.0 32 ............................. GCGGAATCTGCTGCGCACAAGTTACACGGCGC 26507 29 100.0 32 ............................. CCTTGATCGGATTCCAGAAACGAACCACTAAA 26446 29 100.0 32 ............................. CCGCACCCCGCGCGGTTGGTCTGGATGACAGT 26385 29 100.0 32 ............................. TCGTTTAGTGTGGAATTTGGCGACGCGGAGCG 26324 29 100.0 32 ............................. AATTAAATGATTTTGATGCGCGCCGACTTGAA 26263 29 100.0 32 ............................. CCACGCGGCTGCATTCAGTGATATCCAGTTTG 26202 29 100.0 32 ............................. CATCTATTTATCTCGCCGCGATTGGCGATAAC 26141 29 100.0 32 ............................. CCGAACGGCTGGCGAAGCAGGTGGCTGGCGTA 26080 29 100.0 32 ............................. GTTTACCGCCCCGCAGAGGCGCTGGCAGATCC 26019 29 100.0 32 ............................. GGATGACCTGTCGCTAAAACTCGCCGCGTACA 25958 29 100.0 32 ............................. TCCGTTTGGTCCACCAAATGTTTGATGCTTCA 25897 29 100.0 32 ............................. TTCAGGGTGTGATTCCGCATACCAAGCAGTAA 25836 29 96.6 32 .A........................... GGCGCACTGGATGCGATGATGGATATCACTTA 25775 28 72.4 0 .AA........C..T....T-.G.....C | C [25750] ========== ====== ====== ====== ============================= ================================= ================== 21 29 98.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCTGCAGGTGAAATTGAACCACCACAACCCGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGTGATAGTGGTCACCGGGGGCGCGGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCTGGTTGCGGAAATGTGGTGATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGAGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT # Right flank : AGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAACTCCTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGTGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAATTAAGTTATCGAGATTAATCACCAGCAGCGTATTTTTCTTTTCGGTGTCACTCATCCGCTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 83466-84470 **** Predicted by CRISPRDetect 2.4 *** >NZ_VRWR01000014.1 Escherichia coli strain 3_192_1 NODE_14_length_101474_cov_9.663029, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 83466 29 100.0 32 ............................. ATACGCCCCAACCAGAAATAAATTTAGGGGAT 83527 29 100.0 32 ............................. CAATATTCACAATGTGGGATATATCCGATCAC 83588 29 100.0 32 ............................. TAGTCAAGCGGTAATTCATCGTCTGCAGATCC 83649 29 100.0 32 ............................. GCTAATTTACGTAATTTACGTGCTATTGCACT 83710 29 100.0 32 ............................. CCTCTGGTTTAAAAAAGCCGCCGTCAGCGAGC 83771 29 100.0 32 ............................. ACGCAGAATCACGACGCGGTAGAGCGTTACGT 83832 29 100.0 32 ............................. ACCCCGGCAGTGTCTGTTTGACTAATTTATGC 83893 29 100.0 32 ............................. GCTGATGGTCTGGGAGTGTCCATCGGGCAACT 83954 29 100.0 32 ............................. GAAGTAGGCCTGACAGTGATTGAACGCATACT 84015 29 100.0 32 ............................. TGGGTCATGCCGGTGATCGCCTGCCCGTCGTG 84076 29 100.0 32 ............................. GCGGCGCAGGGATTCGTACAGTCAAAAACGCC 84137 29 100.0 32 ............................. AGTTGGGGCGGCGCAATAACGAGACGATACGC 84198 29 100.0 32 ............................. GGGAGTGGCACTTCTGGGGTAGCGGCGGCCCT 84259 29 100.0 32 ............................. TCAACGCGCTCAGACGTTGCGTGAGTGAACCA 84320 29 100.0 32 ............................. AAATATCCAGGGCTGGGCTGGAGGCAGACGGC 84381 29 100.0 32 ............................. CCCGGAATGCATTCTGAAGGTTTGCTGTATAT 84442 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 17 29 99.8 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAATTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGAATAAAGTACTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTGTAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTACA # Right flank : ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATATTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACTGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //